Nucleotide Global Alignment
Description
- Query:
- TRCN0000488694
- Subject:
- NR_144484.2
- Aligned Length:
- 5786
- Identities:
- 1009
- Gaps:
- 4776
Alignment
Query 1 ------------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTC 38
||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCTGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTC 74
Query 39 TGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGC 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGC 148
Query 113 CGACACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACACTCAGATGGCCAGACT 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 149 CGACACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACT 222
Query 187 CCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGG 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGG 296
Query 261 AGGAGGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATAC 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGAGGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATAC 370
Query 335 TGTACATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGA 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGTACATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGA 444
Query 409 AACACCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCAT 482
|||||||||||||||||||
Sbjct 445 AACACCCACAGGAAAATTA------------------------------------------------------- 463
Query 483 GGAAAAATTATTCAACAGAGTGGGACCTAATGGTGAGAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGT 556
|||||||||||||||||||||||||||||||||||
Sbjct 464 ---------------------------------------AGCACAGACTGTGACTTCTGACCAAGAGAAACGGT 498
Query 557 TGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAA 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 499 TGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAA 572
Query 631 GAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTC 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 573 GAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTC 646
Query 705 AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTTCTGCTGAAGAA 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 647 AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAAC-TTTCTGCTGAAGAA 719
Query 779 ATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCC 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 ATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCC 793
Query 853 CAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAG 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 794 CAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAG 867
Query 927 ACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 868 ACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACC 941
Query 1001 AAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCAT 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 AAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCAT 1015
Query 1075 GCTGAGGAAGCGTAACCCCCAGGGTTTAGAG------------------------------------------- 1105
|||||||||||||||||||||||||||||||
Sbjct 1016 GCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGG 1089
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1090 TGACCTCTCTCTCCTCAGATTTCCTTCTTGGCCCTGTGCCCTGCACTTTCTTCACTGTGTTCAAGTGTCATAGC 1163
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1164 TATCAGGCCACTATCATGGATATCATGTATCCTTCCTGGTGCTCACACACCTGTCACCTTGTAAAACACGGACA 1237
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1238 TTAGTGTGAACACAGGACAGCTTCGCTCTTTCTCTTCCTGCCTTTCCTCTATCAGAGAAGTTGATCCATTAAGT 1311
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1312 AATTATGTTTGGTCTATTGTAATTACAGATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTA 1385
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1386 ACAGATAGTTCACCTGTGAACGAACATCAGCTTACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCA 1459
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1460 GACTCCAAGATCCCTTATTCTTTGGGCCTTGAGCAGGTTAGTAGTCCCCTGGTGAGAAGAGAACATTTTGTTTG 1533
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1534 TGGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTT 1607
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1608 CCTAGGAACATTGATGCTGCCTCAGACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATG 1681
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1682 AGCCCAGAGGCTTGTTTGGGGACTGTTTTACTCTGATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTG 1755
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1756 CTTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGCTTTAGATAGA 1829
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1830 GACTTTAGACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTC 1903
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1904 CTGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTCAGA 1977
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1978 AGGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCTTACCTAAAGCTGTTTCTGAAT 2051
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2052 GTTGCACCCTTTGAGAAATTTCTTCTCAGAACCATAAATTGAAACAAATGAGGACTGATCTTGTATACAAAGTG 2125
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2126 CCAACTCAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATG 2199
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2200 TGTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAGCTGGGGAAAGTAGCAGCAACTAGATTAAGACTGGGAG 2273
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2274 GATTTTGACCAAACTAAAGGCCTTTTCTCCTTACTGCATCTGACGTGTGTCTTCTTGAGACAAGATAGCACCCA 2347
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2348 TGAATTACATCATGAGGTATGTGTGAATTCAGTTTACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCA 2421
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2422 AAGACATTCCCAGTCATGAAATGTAGAAGACTGGAAAATTAAGACATTATGTAAAGGTAGATATGGCTTTTAGA 2495
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2496 GTTACATTATGCTTGGCATGAATAAGGTGCCAGGAAAACAGTTTAAAATTATACATCAGCATACAGACTGCTGT 2569
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2570 TAGAAGGTATGGGATCATATTAAGATAATCTGTCAGCTACTACTAGGCATTTATTGTTAATTGAGTTACAGAAA 2643
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2644 GTCATTCAAGACTGAGTTTATAGAAAGCATATTGCATCTATCTCTGTGTAGAACATTTGATTCACATTGTGAAG 2717
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2718 AATGCAGTTTAAAATATACTGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTTT 2791
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2792 ACTGTTTAGATAAATTGTTTTCTGTGTTATTTCCCTTCGTTCACTGTGAGGGGTTGATTCATGAGGAGAGCCCT 2865
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2866 GGGTTCCTGGCTCAGGTTTACTTTTGGCCTTAGGATAGGATTCCCTTATTAGAGATAAATACTGCTGTTCTCTT 2939
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2940 CTAGCTCATTCATTCATTTAGCAGTCAATTGCTCAGTGCCAGGTGCTAGGAACAGAGGCTCAATCTCTACCCTC 3013
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3014 AGAAAACTCAGTGTGACGAGAGAGAGCCTGACAGATAAAATGAACTATGACCCTGTAAGAGGGCTCAGGATCGT 3087
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3088 GAATCCTGCAGGCAGAGAAACATGAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTC 3161
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3162 CTTAACTGGTCTGAGCTTTGGCTTCAGGGTAGTAAAGGGAGGGGTATTAAAGGTCCTGGTTAAATGAAATCATC 3235
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3236 AGTGTGTGTAAAACAGCATTGGTTCTAGCTCATACATGATAACCACTCATTAAGTGGTAATTATGTTTTTATTA 3309
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3310 TAAGGGCTATGCTGTAATTCAGACATGGGCCCAAAACTACAGGAAAGATAAATTGTTTTTGCTAAAGTATTGCC 3383
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3384 AAGAAACTTCACAGTTTCTTGGGAGGTGGGCCTTGAGGCATGCAAAGAACTTCTTCAGGTAGGCAAAGAAGAGA 3457
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3458 GGACACTCTTGGCAGAAAGAGTTGTTGAAAAAAGCAGTAGGGTGTGAAAATACATGGATGTTCAAGTATTTTGG 3531
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3532 TGAGGCTGTTATGTAAAGTGTTGTTGGTCTTTGGGGAAAATTGGCTTATGGAAATTCCTGCCAGAAGTACTAAG 3605
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3606 CCCTTATGGTGGTTCTTCCTGCCCTAGCTCTTGGTTGGTTTATATATAAGGAATATATTTGTGTATTTATATAT 3679
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3680 CAGACATTTGGATGTACCTTTCAGTTATTTAGGATTTAGAAAATTCTTTTTGGATTTTCCAGAATTATTTTATC 3753
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3754 CTTCGGGGATGACAGTTATATGTGTATATACAACCCAGGATGACAAAATCATGGGTCCGGTTTTTGTTGCCAGG 3827
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3828 GCTGCTGTCTCTTTTCTTGCGGTCTTCATTTCTCACGAGGGTGCTGGGAACTTGATCAGTCCCCTGGCCTTTTG 3901
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3902 GCACTGTGGCAGAGTACACAAGTCATACCTTTATGGACAGTTAGCTCACAAAACAACTGCATAATCTGGGATCA 3975
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3976 CTCTTGGTAAATCAGGTGGGTGGTGCAGCCAGGAGATCCCCTTTCCTGGTCACAACAGGAGCACAAAGAAACCA 4049
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4050 TTATCTCCATGACTAGCTCCAGAAGCTGGGCCCAGGGAGTCGTGATGAGGAGTGGAGGTGTATTTGGCCTGTAG 4123
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4124 AATCAACGGCCTTTGAGAACCATACAATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTC 4197
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4198 AAACACTTTGGAAAAAGGGAGCTTTAATATAATTATGCCAAGGTGATAGGCATAAACTAAGACTGTCCTGGACG 4271
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4272 TAGGGTCACCCCTGTCTATAGCCATTTAAGATTTTTGAACCTGATGACTAAACAAACAAAACCCTCTTTCCTTT 4345
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4346 TTAGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGTTCAGGTAGGAA 4419
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4420 ATGCTCTTGGTCACATCAGAACTCTAGATCTGGGGGAATAAACAAACCCGAATTATTACCACACTCTCAAAGTT 4493
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4494 CTCTTCAATCTGGACTATTTGTATTCCAAAGAAAAATTTAGTGCTTTAGCTATTCAGCAATATTGAGAAAAAAC 4567
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4568 ATGAACACATTTATGACTTTGCCTTGACCATTGACTTTTCTAAAATGTGCTTCCTTTTCCTTTATTTCCCTTTT 4641
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4642 TTTATACAAAGAAAATAGCCCAAATTTCTCCTCTTAGGTCATTCCTTAACCTCTCAGAGAACCAGTTTCCCCAT 4715
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4716 GAATTGGGAATAATGCTCTATTTACAGGGCTGTTTGGATTAAATAAGATGCTGTTTATAAAGTGTCTGTGCCAG 4789
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4790 GGCAAAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAGTGTTGCTGAGA 4863
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4864 TGTCACACCTGACACCCTCTAAGGCTACCCTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCAGTCTCCGGGTG 4937
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 4938 CCTTTAGTTATAACCTCTTGTCTGGGTCAGACCATTAGCTTTCATGTCTGCTTCTAGCTACAACTGTAGCCTCC 5011
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5012 CTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCGGCAACAAAAAAAGATTCCTAAGCATCTCGAGGTCCTGTT 5085
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5086 TAAATGGGTTAGGGTCCAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTTATACCTTTTTCATCTCTACAG 5159
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5160 CCCTGTTCTCTTCCTAAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGCGGCACAGCAGA 5233
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5234 CCCTGAAGAGAACTGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGTTCTGAT 5307
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5308 GAACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTGAGGTTATGATC 5381
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5382 TCTTTGCTATTATCACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATAGAAAAAAATTA 5455
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5456 GGAAGTAAACAGGGCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCAAGTTTAATTTG 5529
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5530 TTGATATATGTGTGTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGAAAATACCAAGT 5603
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 5604 TTGTCATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAAGTCAATAAAAG 5677
Query 1106 -------------- 1105
Sbjct 5678 CACAGTTTTGCAAA 5691
