Nucleotide Global Alignment
Description
- Query:
- TRCN0000488694
- Subject:
- XR_002957192.1
- Aligned Length:
- 3802
- Identities:
- 1102
- Gaps:
- 2698
Alignment
Query 1 --------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 74
Query 43 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 148
Query 117 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTG 190
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 149 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG 222
Query 191 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 296
Query 265 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA 370
Query 339 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 444
Query 413 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 518
Query 487 AAATTATTCAACAGAGTGGGACCTAATGGTGAGAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTTGCT 560
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAATTAATCAACAGAGTGGGACCTAATGGTGAGAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTTGCT 592
Query 561 ACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAGAAG 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAGAAG 666
Query 635 CTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGAC 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGAC 740
Query 709 TGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTTCTGCTGAAGAAATAG 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 741 TGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAAC-TTTCTGCTGAAGAAATAG 813
Query 783 CTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGA 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 CTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGA 887
Query 857 GCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGA 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 GCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGA 961
Query 931 GGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAG 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 GGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAG 1035
Query 1005 AAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCATGCTG 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 AAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCATGCTG 1109
Query 1079 AGGAAGCGTAACCCCCAGGGTTTAGAG----------------------------------------------- 1105
|||||||||||||||||||||||||||
Sbjct 1110 AGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGATGGG 1183
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1184 ACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAACGAACATCAGCTT 1257
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1258 ACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTCTTTGGGCCTTGAG 1331
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1332 CAGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGTTCAGGTAGGAAA 1405
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1406 TGCTCTTGGTCACATCAGAACTCTAGATCTGGGGGAATAAACAAACCCGAATTATTACCACACTCTCAAAGTTC 1479
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1480 TCTTCAATCTGGACTATTTGTATTCCAAAGAAAAATTTAGTGCTTTAGCTATTCAGCAATATTGAGAAAAAACA 1553
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1554 TGAACACATTTATGACTTTGCCTTGACCATTGACTTTTCTAAAATGTGCTTCCTTTTCCTTTATTTCCCTTTTT 1627
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1628 TTATACAAAGAAAATAGCCCAAATTTCTCCTCTTAGGTCATTCCTTAACCTCTCAGAGAACCAGTTTCCCCATG 1701
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1702 AATTGGGAATAATGCTCTATTTACAGGGCTGTTTGGATTAAATAAGATGCTGTTTATAAAGTGTCTGTGCCAGG 1775
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1776 GCAAAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAGTGTTGCTGAGAT 1849
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1850 GTCACACCTGACACCCTCTAAGGCTACCCTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCAGTCTCCGGGTGC 1923
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1924 CTTTAGTTATAACCTCTTGTCTGGGTCAGACCATTAGCTTTCATGTCTGCTTCTAGCTACAACTGTAGCCTCCC 1997
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1998 TTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCGGCAACAAAAAAAGATTCCTAAGCATCTCGAGGTCCTGTTT 2071
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2072 AAATGGGTTAGGGTCCAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTTATACCTTTTTCATCTCTACAGC 2145
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2146 CCTGTTCTCTTCCTAAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGCGGCACAGCAGAC 2219
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2220 CCTGAAGAGAACTGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGTTCTGATG 2293
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2294 AACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTGAGGTTATGATCT 2367
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2368 CTTTGCTATTATCACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATAGAAAAAAATTAG 2441
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2442 GAAGTAAACAGGGCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCAAGTTTAATTTGT 2515
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2516 TGATATATGTGTGTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGAAAATACCAAGTT 2589
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2590 TGTCATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAAGTCAATAAAAGC 2663
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2664 ACAGTTTTGCAAATTTGTCTAAAACGCCAGATAATCTTGAACAAAAATAAAATGTCTGACCACTCCAAAATAGG 2737
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2738 AAAAGACAATCTTGTGCAAATAGACATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGAT 2811
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2812 ACTGCACCCTCCTGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTTGCGTTCTAGGAAACTCTGGA 2885
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2886 TCTCAGCCTCATCTCCAGCTTTGCCTGGACCTTGCTAGGGGGAGGGAGGGACAGGAGCACAGAGGAGGAGAGGA 2959
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2960 GAGGGATGTGATGTCTTTCTTAGGAAAGAAAAAAAGGCACAGTGATGAGCTATAAAGGTAGTGATGAGAGCTAT 3033
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3034 AAAGGTAGTGATGAAAGCAAGGAATAATTTTCATTCACCCCAAATCCTACGGCAAGCTTTGACAATGTAACATC 3107
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3108 TTTATCTTGTGGTTAGGAAAATGGACCTAGAGAGATTATGTGGTTTGCTCAAAATCACATAGCTACTAAGTGCA 3181
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3182 GTAGTGCTTTCTATAAGACCAACTTGCCTTTCCACTTGGTTGGAAAATTTAAAAACCAAACCTGTCGTAATCTA 3255
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3256 TCTGTTCTGCCCCTCCCGCCTGTATCATGAGATGACTGAAAATTCCAGGTGGCCATAAACTCAAACAAGAGCCT 3329
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3330 AGCCCTTGGCTTATTACCGGTGGCTACTACAAACCTACAGACCAGAGCCCAGGGTAGTATAGAGTCCCAACTCT 3403
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3404 GGGCCCTGACTGCAGGTCATTCAGGTCCCAGTCACAGTGAAAGCAGACTCATTCAGCTATCTGGAGAAGTGTAA 3477
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3478 TCTGAGGGCCACTTGGCATCCTGAGTTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGC 3551
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3552 CAGTGTTACTGCAGTAAGAGAAAACCAGGAAGTCCATCTAGGAGATGAAATTTGTGCTTGCATAACAGAGCCAT 3625
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3626 GGAAATGGCTATCCCAGCATCTCCCCTCACTGCAGACTCCATTGTAAGCAAAGCATGGACCTTTTTCTTTGAAA 3699
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3700 CCAACCCTGTCACTTGTTAAATTTAGAATTACCTCTAAATGCTAAGTTTATTTAAGAGGTAAATGTCCTGCTAT 3773
Query 1106 ---------------------------- 1105
Sbjct 3774 TTTCAGAATGGAGAAAAAAAAAAAAAAA 3801
