Nucleotide Global Alignment
Description
- Query:
- TRCN0000488694
- Subject:
- XR_002957194.1
- Aligned Length:
- 3957
- Identities:
- 1102
- Gaps:
- 2853
Alignment
Query 1 ---------------------------------------------------ATGGCGTACTCCACAGTGCAGAG 23
|||||||||||||||||||||||
Sbjct 1 TCCGGTTCCGGTTCCGGCTGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAG 74
Query 24 AGTCGCTCTGGCTTCTGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGC 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGTCGCTCTGGCTTCTGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGC 148
Query 98 GGCAGGAGCCGCCGCCGACACCTG-------------------------------------------------A 122
|||||||||||||||||||||||| |
Sbjct 149 GGCAGGAGCCGCCGCCGACACCTGAAGAAAACTAAGAGTGAGAACTGACAAAAAGCCATTGGATTTGACGGTTA 222
Query 123 AGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTGGGGCTC 196
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 223 AGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTGGGGCTC 296
Query 197 GTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGAGGAGGT 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGAGGAGGT 370
Query 271 AGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTACATTCT 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTACATTCT 444
Query 345 ATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACA 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACA 518
Query 419 GGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAAAAATTA 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAAAAATTA 592
Query 493 TTCAACAGAGTGGGACCTAATGGTGAG----------------------------------------------- 519
.||||||||||||||||||||||||||
Sbjct 593 ATCAACAGAGTGGGACCTAATGGTGAGAGTACCCAGACAGACCATAGTGATGTTTACGTCCATTGCCTAGGAGT 666
Query 520 ----------------------------------------AGAGCACAGACTGTGACTTCTGACCAAGAGAAAC 553
||||||||||||||||||||||||||||||||||
Sbjct 667 ATTTACCACTAAATGGTTGGATTGTCTGATATTTCTAAGCAGAGCACAGACTGTGACTTCTGACCAAGAGAAAC 740
Query 554 GGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAG 814
Query 628 AAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCT 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCT 888
Query 702 TTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTTCTGCTGAA 775
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 889 TTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAAC-TTTCTGCTGAA 961
Query 776 GAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGA 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 GAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGA 1035
Query 850 CCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATG 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 CCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATG 1109
Query 924 AAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACC 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 AAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACC 1183
Query 998 ACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAG 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 ACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAG 1257
Query 1072 CATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAG---------------------------------------- 1105
||||||||||||||||||||||||||||||||||
Sbjct 1258 CATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCA 1331
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1332 AGATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAACGAACA 1405
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1406 TCAGCTTACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTCTTTGGG 1479
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1480 CCTTGAGCAGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGTTCAGG 1553
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1554 TAGGAAATGCTCTTGGTCACATCAGAACTCTAGATCTGGGGGAATAAACAAACCCGAATTATTACCACACTCTC 1627
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1628 AAAGTTCTCTTCAATCTGGACTATTTGTATTCCAAAGAAAAATTTAGTGCTTTAGCTATTCAGCAATATTGAGA 1701
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1702 AAAAACATGAACACATTTATGACTTTGCCTTGACCATTGACTTTTCTAAAATGTGCTTCCTTTTCCTTTATTTC 1775
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1776 CCTTTTTTTATACAAAGAAAATAGCCCAAATTTCTCCTCTTAGGTCATTCCTTAACCTCTCAGAGAACCAGTTT 1849
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1850 CCCCATGAATTGGGAATAATGCTCTATTTACAGGGCTGTTTGGATTAAATAAGATGCTGTTTATAAAGTGTCTG 1923
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1924 TGCCAGGGCAAAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAGTGTTG 1997
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1998 CTGAGATGTCACACCTGACACCCTCTAAGGCTACCCTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCAGTCTC 2071
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2072 CGGGTGCCTTTAGTTATAACCTCTTGTCTGGGTCAGACCATTAGCTTTCATGTCTGCTTCTAGCTACAACTGTA 2145
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2146 GCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCGGCAACAAAAAAAGATTCCTAAGCATCTCGAGGT 2219
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2220 CCTGTTTAAATGGGTTAGGGTCCAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTTATACCTTTTTCATCT 2293
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2294 CTACAGCCCTGTTCTCTTCCTAAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGCGGCAC 2367
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2368 AGCAGACCCTGAAGAGAACTGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGT 2441
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2442 TCTGATGAACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTGAGGTT 2515
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2516 ATGATCTCTTTGCTATTATCACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATAGAAAA 2589
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2590 AAATTAGGAAGTAAACAGGGCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCAAGTTT 2663
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2664 AATTTGTTGATATATGTGTGTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGAAAATA 2737
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2738 CCAAGTTTGTCATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAAGTCAA 2811
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2812 TAAAAGCACAGTTTTGCAAATTTGTCTAAAACGCCAGATAATCTTGAACAAAAATAAAATGTCTGACCACTCCA 2885
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2886 AAATAGGAAAAGACAATCTTGTGCAAATAGACATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGC 2959
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2960 AAGAGATACTGCACCCTCCTGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTTGCGTTCTAGGAAA 3033
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3034 CTCTGGATCTCAGCCTCATCTCCAGCTTTGCCTGGACCTTGCTAGGGGGAGGGAGGGACAGGAGCACAGAGGAG 3107
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3108 GAGAGGAGAGGGATGTGATGTCTTTCTTAGGAAAGAAAAAAAGGCACAGTGATGAGCTATAAAGGTAGTGATGA 3181
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3182 GAGCTATAAAGGTAGTGATGAAAGCAAGGAATAATTTTCATTCACCCCAAATCCTACGGCAAGCTTTGACAATG 3255
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3256 TAACATCTTTATCTTGTGGTTAGGAAAATGGACCTAGAGAGATTATGTGGTTTGCTCAAAATCACATAGCTACT 3329
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3330 AAGTGCAGTAGTGCTTTCTATAAGACCAACTTGCCTTTCCACTTGGTTGGAAAATTTAAAAACCAAACCTGTCG 3403
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3404 TAATCTATCTGTTCTGCCCCTCCCGCCTGTATCATGAGATGACTGAAAATTCCAGGTGGCCATAAACTCAAACA 3477
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3478 AGAGCCTAGCCCTTGGCTTATTACCGGTGGCTACTACAAACCTACAGACCAGAGCCCAGGGTAGTATAGAGTCC 3551
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3552 CAACTCTGGGCCCTGACTGCAGGTCATTCAGGTCCCAGTCACAGTGAAAGCAGACTCATTCAGCTATCTGGAGA 3625
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3626 AGTGTAATCTGAGGGCCACTTGGCATCCTGAGTTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAG 3699
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3700 GGAAGGCCAGTGTTACTGCAGTAAGAGAAAACCAGGAAGTCCATCTAGGAGATGAAATTTGTGCTTGCATAACA 3773
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3774 GAGCCATGGAAATGGCTATCCCAGCATCTCCCCTCACTGCAGACTCCATTGTAAGCAAAGCATGGACCTTTTTC 3847
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3848 TTTGAAACCAACCCTGTCACTTGTTAAATTTAGAATTACCTCTAAATGCTAAGTTTATTTAAGAGGTAAATGTC 3921
Query 1106 ----------------------------------- 1105
Sbjct 3922 CTGCTATTTTCAGAATGGAGAAAAAAAAAAAAAAA 3956
