Nucleotide Global Alignment

Description

• Query: TRCN0000488694
• Subject: XR_002957195.1
• Aligned Length: 3802
• Identities: 956
• Gaps: 2844

Alignment

Query    1  --------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG  42
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  GGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG  74

Query   43  CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC  116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC  148

Query  117  ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTG  190
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct  149  ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG  222

Query  191  GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA  264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA  296

Query  265  GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA  338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA  370

Query  339  CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA  412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA  444

Query  413  CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA  486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA  518

Query  487  AAATTATTCAACAGAGTGGGACCTAATGGTGAGAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTTGCT  560
            ||||||.||||||||||||||||||||||||||                                         
Sbjct  519  AAATTAATCAACAGAGTGGGACCTAATGGTGAG-----------------------------------------  551

Query  561  ACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAGAAG  634
                                                                                      
Sbjct  552  --------------------------------------------------------------------------  551

Query  635  CTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGAC  708
                                           |||||||||||||||||||||||||||||||||||||||||||
Sbjct  552  -------------------------------AGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGAC  594

Query  709  TGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTTCTGCTGAAGAAATAG  782
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  595  TGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAAC-TTTCTGCTGAAGAAATAG  667

Query  783  CTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGA  856
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  668  CTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGA  741

Query  857  GCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGA  930
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  742  GCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGA  815

Query  931  GGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAG  1004
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  816  GGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAG  889

Query 1005  AAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCATGCTG  1078
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  890  AAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCATGCTG  963

Query 1079  AGGAAGCGTAACCCCCAGGGTTTAGAG-----------------------------------------------  1105
            |||||||||||||||||||||||||||                                               
Sbjct  964  AGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGATGGG  1037

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1038  ACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAACGAACATCAGCTT  1111

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1112  ACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTCTTTGGGCCTTGAG  1185

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1186  CAGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGTTCAGGTAGGAAA  1259

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1260  TGCTCTTGGTCACATCAGAACTCTAGATCTGGGGGAATAAACAAACCCGAATTATTACCACACTCTCAAAGTTC  1333

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1334  TCTTCAATCTGGACTATTTGTATTCCAAAGAAAAATTTAGTGCTTTAGCTATTCAGCAATATTGAGAAAAAACA  1407

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1408  TGAACACATTTATGACTTTGCCTTGACCATTGACTTTTCTAAAATGTGCTTCCTTTTCCTTTATTTCCCTTTTT  1481

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1482  TTATACAAAGAAAATAGCCCAAATTTCTCCTCTTAGGTCATTCCTTAACCTCTCAGAGAACCAGTTTCCCCATG  1555

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1556  AATTGGGAATAATGCTCTATTTACAGGGCTGTTTGGATTAAATAAGATGCTGTTTATAAAGTGTCTGTGCCAGG  1629

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1630  GCAAAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAGTGTTGCTGAGAT  1703

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1704  GTCACACCTGACACCCTCTAAGGCTACCCTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCAGTCTCCGGGTGC  1777

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1778  CTTTAGTTATAACCTCTTGTCTGGGTCAGACCATTAGCTTTCATGTCTGCTTCTAGCTACAACTGTAGCCTCCC  1851

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1852  TTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCGGCAACAAAAAAAGATTCCTAAGCATCTCGAGGTCCTGTTT  1925

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 1926  AAATGGGTTAGGGTCCAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTTATACCTTTTTCATCTCTACAGC  1999

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2000  CCTGTTCTCTTCCTAAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGCGGCACAGCAGAC  2073

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2074  CCTGAAGAGAACTGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGTTCTGATG  2147

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2148  AACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTGAGGTTATGATCT  2221

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2222  CTTTGCTATTATCACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATAGAAAAAAATTAG  2295

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2296  GAAGTAAACAGGGCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCAAGTTTAATTTGT  2369

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2370  TGATATATGTGTGTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGAAAATACCAAGTT  2443

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2444  TGTCATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAAGTCAATAAAAGC  2517

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2518  ACAGTTTTGCAAATTTGTCTAAAACGCCAGATAATCTTGAACAAAAATAAAATGTCTGACCACTCCAAAATAGG  2591

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2592  AAAAGACAATCTTGTGCAAATAGACATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGAT  2665

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2666  ACTGCACCCTCCTGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTTGCGTTCTAGGAAACTCTGGA  2739

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2740  TCTCAGCCTCATCTCCAGCTTTGCCTGGACCTTGCTAGGGGGAGGGAGGGACAGGAGCACAGAGGAGGAGAGGA  2813

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2814  GAGGGATGTGATGTCTTTCTTAGGAAAGAAAAAAAGGCACAGTGATGAGCTATAAAGGTAGTGATGAGAGCTAT  2887

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2888  AAAGGTAGTGATGAAAGCAAGGAATAATTTTCATTCACCCCAAATCCTACGGCAAGCTTTGACAATGTAACATC  2961

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 2962  TTTATCTTGTGGTTAGGAAAATGGACCTAGAGAGATTATGTGGTTTGCTCAAAATCACATAGCTACTAAGTGCA  3035

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 3036  GTAGTGCTTTCTATAAGACCAACTTGCCTTTCCACTTGGTTGGAAAATTTAAAAACCAAACCTGTCGTAATCTA  3109

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 3110  TCTGTTCTGCCCCTCCCGCCTGTATCATGAGATGACTGAAAATTCCAGGTGGCCATAAACTCAAACAAGAGCCT  3183

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 3184  AGCCCTTGGCTTATTACCGGTGGCTACTACAAACCTACAGACCAGAGCCCAGGGTAGTATAGAGTCCCAACTCT  3257

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 3258  GGGCCCTGACTGCAGGTCATTCAGGTCCCAGTCACAGTGAAAGCAGACTCATTCAGCTATCTGGAGAAGTGTAA  3331

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 3332  TCTGAGGGCCACTTGGCATCCTGAGTTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGC  3405

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 3406  CAGTGTTACTGCAGTAAGAGAAAACCAGGAAGTCCATCTAGGAGATGAAATTTGTGCTTGCATAACAGAGCCAT  3479

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 3480  GGAAATGGCTATCCCAGCATCTCCCCTCACTGCAGACTCCATTGTAAGCAAAGCATGGACCTTTTTCTTTGAAA  3553

Query 1106  --------------------------------------------------------------------------  1105
                                                                                      
Sbjct 3554  CCAACCCTGTCACTTGTTAAATTTAGAATTACCTCTAAATGCTAAGTTTATTTAAGAGGTAAATGTCCTGCTAT  3627

Query 1106  ----------------------------  1105
                                        
Sbjct 3628  TTTCAGAATGGAGAAAAAAAAAAAAAAA  3655