Nucleotide Global Alignment
Description
- Query:
- TRCN0000488694
- Subject:
- XR_428851.4
- Aligned Length:
- 2617
- Identities:
- 1102
- Gaps:
- 1513
Alignment
Query 1 --------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 74
Query 43 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 148
Query 117 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTG 190
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 149 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG 222
Query 191 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 296
Query 265 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA 370
Query 339 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 444
Query 413 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 518
Query 487 AAATTATTCAACAGAGTGGGACCTAATGGTGAG----------------------------------------- 519
||||||.||||||||||||||||||||||||||
Sbjct 519 AAATTAATCAACAGAGTGGGACCTAATGGTGAGAGTACCCAGACAGACCATAGTGATGTTTACGTCCATTGCCT 592
Query 520 ----------------------------------------------AGAGCACAGACTGTGACTTCTGACCAAG 547
||||||||||||||||||||||||||||
Sbjct 593 AGGAGTATTTACCACTAAATGGTTGGATTGTCTGATATTTCTAAGCAGAGCACAGACTGTGACTTCTGACCAAG 666
Query 548 AGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCT 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCT 740
Query 622 CCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTA 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTA 814
Query 696 TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTTCT 769
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 815 TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAAC-TTTCT 887
Query 770 GCTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCC 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 GCTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCC 961
Query 844 CACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTT 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 CACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTT 1035
Query 918 TTCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 TTCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG 1109
Query 992 GAAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATAC 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 GAAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATAC 1183
Query 1066 AGGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAG---------------------------------- 1105
||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 AGGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAA 1257
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1258 GTCCCAAGATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAA 1331
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1332 CGAACATCAGCTTACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTC 1405
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1406 TTTGGGCCTTGAGCAGCGGCGCCACCCTGGCCCCCTGCTGTAGCTGCCGCCTTGGTTCTCTTGGCTGAAGCTGG 1479
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1480 TGCTGTTGGGCGCGTGGCTCCCAGCTGCACACTGGCGAGTGAGTCGGCCTCTTGAACTGCTCAGGAAACATCCC 1553
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1554 CAGATGGAGAGAGAGAAACAGGCAGTGGGTGAGACCAGAGCTCCCACCTGAACACAGTCCCCAGCACAGCATTT 1627
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1628 TTGACTGCACCCCGAGTCCCACCAGGGCCCCTGTACCACTTCTACAGCCCACAGGATCAGGCCCACTCATCTCT 1701
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1702 ACTAGGCAAAGATTCCAGGGCAGGCCCAGCTGGAAGGAGGCGGCACCCCCAGCCCAGTGTAATCAAGTCAACAG 1775
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1776 CCAGACCAAAACCTGTGATCAGCCAACAAAGTGCGCACTCAAAAGTTCTGGGCCACCAAACCATACTGAGCCTG 1849
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1850 AACAGGGGCAGGGAGAATGTCTGAGAGGATATGGCCATTGAAGACGGGGAAGAAAGAACAAAGGCTGCATCTTC 1923
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1924 TGGAAGAGACCACAACCAGGGCAAGCACTCCAGGGAGCCTACGAGGGGGCTCTGCGGGGATGAGCCCATGGGAG 1997
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1998 GCTGGGGTGTAGGAGTGCTCAGAACAACAACTCTGGGACACAAGAAGCTACAGGCACCAACAGTGAGGTCTCAG 2071
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2072 AAGGGTCCCAGCTGGTGGCCTCCAAATTCTCCATACTGCAGAACCCCAATCTGCTCAAAATCCTTGAATGGTTT 2145
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2146 CTGATTGCTCTTAAGCTGAAGACCAACATTCTCTCCCTTCCCCTAGGTCTAAAATAAACACATACTCCCCACCT 2219
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2220 CTGGGGCACCAAGAGTTGCAGCCACACCAGGCTGGTCTGTTGCCTCACATGCACTGCACTCCCTCTTGCCACAG 2293
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2294 GGCCCTTGCTCCTGCTGCCTGCACTGCCCTCCCCCTCGCCCCCCTCAGTGATCAACTCCCACTCATCCTGCAGA 2367
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2368 TTTCAGCTTGGATGTCACCTCCCGAGGGACGCTGTGCCTGCCTCCCTCGTCAGAGCAGGTGTTGTCATCTACTC 2441
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2442 ACAGAATTTGGCTTCCTTCCACAAAGCAACCCCGTGACCATCTGTTTAACATTGTCTCTCCACCTAGACTGTAA 2515
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2516 GGTCCGTGAAAGCAGGGACCACACCCATTTGTGCTCACTTGGGACCTACAGCCTCTAATCCAGAGCCTGACACA 2589
Query 1106 --------------------------- 1105
Sbjct 2590 AACCTCAATAAATATTTAAGAACTGAA 2616
