Nucleotide Global Alignment
Description
- Query:
- TRCN0000488694
- Subject:
- XR_930897.3
- Aligned Length:
- 3124
- Identities:
- 1102
- Gaps:
- 2020
Alignment
Query 1 --------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 74
Query 43 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 148
Query 117 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTG 190
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 149 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG 222
Query 191 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 296
Query 265 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA 370
Query 339 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 444
Query 413 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 518
Query 487 AAATTATTCAACAGAGTGGGACCTAATGGTGAG----------------------------------------- 519
||||||.||||||||||||||||||||||||||
Sbjct 519 AAATTAATCAACAGAGTGGGACCTAATGGTGAGAGTACCCAGACAGACCATAGTGATGTTTACGTCCATTGCCT 592
Query 520 ----------------------------------------------AGAGCACAGACTGTGACTTCTGACCAAG 547
||||||||||||||||||||||||||||
Sbjct 593 AGGAGTATTTACCACTAAATGGTTGGATTGTCTGATATTTCTAAGCAGAGCACAGACTGTGACTTCTGACCAAG 666
Query 548 AGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCT 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCT 740
Query 622 CCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTA 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTA 814
Query 696 TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTTCT 769
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 815 TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAAC-TTTCT 887
Query 770 GCTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCC 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 GCTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCC 961
Query 844 CACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTT 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 CACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTT 1035
Query 918 TTCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 TTCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAG 1109
Query 992 GAAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATAC 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 GAAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATAC 1183
Query 1066 AGGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAG---------------------------------- 1105
||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 AGGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAA 1257
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1258 GTCCCAAGATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAA 1331
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1332 CGAACATCAGCTTACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTC 1405
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1406 TTTGGGCCTTGAGCAGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGG 1479
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1480 TTCAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGCGGCACAGCAGACCCTGAAGAGAAC 1553
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1554 TGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGTTCTGATGAACCTTAAACTT 1627
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1628 GAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTGAGGTTATGATCTCTTTGCTATTAT 1701
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1702 CACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATAGAAAAAAATTAGGAAGTAAACAGG 1775
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1776 GCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCAAGTTTAATTTGTTGATATATGTGT 1849
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1850 GTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGAAAATACCAAGTTTGTCATTGCACA 1923
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1924 TACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAAGTCAATAAAAGCACAGTTTTGCAA 1997
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1998 ATTTGTCTAAAACGCCAGATAATCTTGAACAAAAATAAAATGTCTGACCACTCCAAAATAGGAAAAGACAATCT 2071
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2072 TGTGCAAATAGACATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGCACCCTCC 2145
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2146 TGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTTGCGTTCTAGGAAACTCTGGATCTCAGCCTCAT 2219
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2220 CTCCAGCTTTGCCTGGACCTTGCTAGGGGGAGGGAGGGACAGGAGCACAGAGGAGGAGAGGAGAGGGATGTGAT 2293
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2294 GTCTTTCTTAGGAAAGAAAAAAAGGCACAGTGATGAGCTATAAAGGTAGTGATGAGAGCTATAAAGGTAGTGAT 2367
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2368 GAAAGCAAGGAATAATTTTCATTCACCCCAAATCCTACGGCAAGCTTTGACAATGTAACATCTTTATCTTGTGG 2441
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2442 TTAGGAAAATGGACCTAGAGAGATTATGTGGTTTGCTCAAAATCACATAGCTACTAAGTGCAGTAGTGCTTTCT 2515
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2516 ATAAGACCAACTTGCCTTTCCACTTGGTTGGAAAATTTAAAAACCAAACCTGTCGTAATCTATCTGTTCTGCCC 2589
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2590 CTCCCGCCTGTATCATGAGATGACTGAAAATTCCAGGTGGCCATAAACTCAAACAAGAGCCTAGCCCTTGGCTT 2663
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2664 ATTACCGGTGGCTACTACAAACCTACAGACCAGAGCCCAGGGTAGTATAGAGTCCCAACTCTGGGCCCTGACTG 2737
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2738 CAGGTCATTCAGGTCCCAGTCACAGTGAAAGCAGACTCATTCAGCTATCTGGAGAAGTGTAATCTGAGGGCCAC 2811
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2812 TTGGCATCCTGAGTTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGTTACTGC 2885
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2886 AGTAAGAGAAAACCAGGAAGTCCATCTAGGAGATGAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTAT 2959
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2960 CCCAGCATCTCCCCTCACTGCAGACTCCATTGTAAGCAAAGCATGGACCTTTTTCTTTGAAACCAACCCTGTCA 3033
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3034 CTTGTTAAATTTAGAATTACCTCTAAATGCTAAGTTTATTTAAGAGGTAAATGTCCTGCTATTTTCAGAATGGA 3107
Query 1106 ---------------- 1105
Sbjct 3108 GAAAAAAAAAAAAAAA 3123
