Nucleotide Global Alignment
Description
- Query:
- TRCN0000488694
- Subject:
- XR_930903.3
- Aligned Length:
- 3873
- Identities:
- 1102
- Gaps:
- 2769
Alignment
Query 1 ---------------------------------------------------ATGGCGTACTCCACAGTGCAGAG 23
|||||||||||||||||||||||
Sbjct 1 TCCGGTTCCGGTTCCGGCTGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAG 74
Query 24 AGTCGCTCTGGCTTCTGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGC 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGTCGCTCTGGCTTCTGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGC 148
Query 98 GGCAGGAGCCGCCGCCGACACCTG-------------------------------------------------A 122
|||||||||||||||||||||||| |
Sbjct 149 GGCAGGAGCCGCCGCCGACACCTGAAGAAAACTAAGAGTGAGAACTGACAAAAAGCCATTGGATTTGACGGTTA 222
Query 123 AGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTGGGGCTC 196
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 223 AGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTGGGGCTC 296
Query 197 GTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGAGGAGGT 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGAGGAGGT 370
Query 271 AGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTACATTCT 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTACATTCT 444
Query 345 ATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACA 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACA 518
Query 419 GGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAAAAATTA 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAAAAATTA 592
Query 493 TTCAACAGAGTGGGACCTAATGGTGAG---AGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTTGCTACA 563
.|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATCAACAGAGTGGGACCTAATGGTGAGAGCAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTTGCTACA 666
Query 564 TCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAGAAGCTG 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAGAAGCTG 740
Query 638 AGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGT 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGT 814
Query 712 ATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTTCTGCTGAAGAAATAGCTG 785
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 815 ATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAAC-TTTCTGCTGAAGAAATAGCTG 887
Query 786 AAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCC 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 AAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCC 961
Query 860 CAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGA 933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 CAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGA 1035
Query 934 TCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGAAG 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 TCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGAAG 1109
Query 1008 AGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCATGCTGAGG 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 AGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCATGCTGAGG 1183
Query 1082 AAGCGTAACCCCCAGGGTTTAGAG-------------------------------------------------- 1105
||||||||||||||||||||||||
Sbjct 1184 AAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGATGGGACC 1257
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1258 ACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAACGAACATCAGCTTACA 1331
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1332 GATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTCTTTGGGCCTTGAGCAG 1405
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1406 AATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGTTCAGGTAGGAAATGC 1479
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1480 TCTTGGTCACATCAGAACTCTAGATCTGGGGGAATAAACAAACCCGAATTATTACCACACTCTCAAAGTTCTCT 1553
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1554 TCAATCTGGACTATTTGTATTCCAAAGAAAAATTTAGTGCTTTAGCTATTCAGCAATATTGAGAAAAAACATGA 1627
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1628 ACACATTTATGACTTTGCCTTGACCATTGACTTTTCTAAAATGTGCTTCCTTTTCCTTTATTTCCCTTTTTTTA 1701
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1702 TACAAAGAAAATAGCCCAAATTTCTCCTCTTAGGTCATTCCTTAACCTCTCAGAGAACCAGTTTCCCCATGAAT 1775
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1776 TGGGAATAATGCTCTATTTACAGGGCTGTTTGGATTAAATAAGATGCTGTTTATAAAGTGTCTGTGCCAGGGCA 1849
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1850 AAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAGTGTTGCTGAGATGTC 1923
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1924 ACACCTGACACCCTCTAAGGCTACCCTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCAGTCTCCGGGTGCCTT 1997
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 1998 TAGTTATAACCTCTTGTCTGGGTCAGACCATTAGCTTTCATGTCTGCTTCTAGCTACAACTGTAGCCTCCCTTC 2071
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2072 CTTTTGCCTTCAAATCTGCCACAGCTGCCCGGCAACAAAAAAAGATTCCTAAGCATCTCGAGGTCCTGTTTAAA 2145
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2146 TGGGTTAGGGTCCAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTTATACCTTTTTCATCTCTACAGCCCT 2219
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2220 GTTCTCTTCCTAAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGCGGCACAGCAGACCCT 2293
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2294 GAAGAGAACTGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGTTCTGATGAAC 2367
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2368 CTTAAACTTGAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTGAGGTTATGATCTCTT 2441
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2442 TGCTATTATCACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATAGAAAAAAATTAGGAA 2515
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2516 GTAAACAGGGCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCAAGTTTAATTTGTTGA 2589
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2590 TATATGTGTGTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGAAAATACCAAGTTTGT 2663
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2664 CATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAAGTCAATAAAAGCACA 2737
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2738 GTTTTGCAAATTTGTCTAAAACGCCAGATAATCTTGAACAAAAATAAAATGTCTGACCACTCCAAAATAGGAAA 2811
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2812 AGACAATCTTGTGCAAATAGACATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACT 2885
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2886 GCACCCTCCTGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTTGCGTTCTAGGAAACTCTGGATCT 2959
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 2960 CAGCCTCATCTCCAGCTTTGCCTGGACCTTGCTAGGGGGAGGGAGGGACAGGAGCACAGAGGAGGAGAGGAGAG 3033
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3034 GGATGTGATGTCTTTCTTAGGAAAGAAAAAAAGGCACAGTGATGAGCTATAAAGGTAGTGATGAGAGCTATAAA 3107
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3108 GGTAGTGATGAAAGCAAGGAATAATTTTCATTCACCCCAAATCCTACGGCAAGCTTTGACAATGTAACATCTTT 3181
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3182 ATCTTGTGGTTAGGAAAATGGACCTAGAGAGATTATGTGGTTTGCTCAAAATCACATAGCTACTAAGTGCAGTA 3255
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3256 GTGCTTTCTATAAGACCAACTTGCCTTTCCACTTGGTTGGAAAATTTAAAAACCAAACCTGTCGTAATCTATCT 3329
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3330 GTTCTGCCCCTCCCGCCTGTATCATGAGATGACTGAAAATTCCAGGTGGCCATAAACTCAAACAAGAGCCTAGC 3403
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3404 CCTTGGCTTATTACCGGTGGCTACTACAAACCTACAGACCAGAGCCCAGGGTAGTATAGAGTCCCAACTCTGGG 3477
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3478 CCCTGACTGCAGGTCATTCAGGTCCCAGTCACAGTGAAAGCAGACTCATTCAGCTATCTGGAGAAGTGTAATCT 3551
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3552 GAGGGCCACTTGGCATCCTGAGTTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAG 3625
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3626 TGTTACTGCAGTAAGAGAAAACCAGGAAGTCCATCTAGGAGATGAAATTTGTGCTTGCATAACAGAGCCATGGA 3699
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3700 AATGGCTATCCCAGCATCTCCCCTCACTGCAGACTCCATTGTAAGCAAAGCATGGACCTTTTTCTTTGAAACCA 3773
Query 1106 -------------------------------------------------------------------------- 1105
Sbjct 3774 ACCCTGTCACTTGTTAAATTTAGAATTACCTCTAAATGCTAAGTTTATTTAAGAGGTAAATGTCCTGCTATTTT 3847
Query 1106 ------------------------- 1105
Sbjct 3848 CAGAATGGAGAAAAAAAAAAAAAAA 3872
