Nucleotide Global Alignment

Description

Query:
TRCN0000488697
Subject:
XM_005257368.4
Aligned Length:
2388
Identities:
1230
Gaps:
1158

Alignment

Query    1  ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA  74

Query   75  TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAGA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAGA  148

Query  149  CCCCCACTGAGGACGGATCTGAGGAACCGGGCTCTGAAACCTCTGATGCTAAGAGCACTCCAACAGCGGAAGAT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCCCCACTGAGGACGGATCTGAGGAACCGGGCTCTGAAACCTCTGATGCTAAGAGCACTCCAACAGCGGAAGAT  222

Query  223  GTGACAGCACCCTTAGTGGATGAGGGAGCTCCCGGCAAGCAGGCTGCCGCGCAGCCCCACACGGAGATCCCAGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTGACAGCACCCTTAGTGGATGAGGGAGCTCCCGGCAAGCAGGCTGCCGCGCAGCCCCACACGGAGATCCCAGA  296

Query  297  AGGAACCACAGCTGAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGGAACCACAGCTGAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCC  370

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct  371  AAGAGGAGTTGAGAGTTCCGGGCCGGCAGAGGAAGGCGCCTGAAAGGCCCCTGGCCAATGAGATTAGCGCCCAC  444

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct  445  GTCCAGCCTGGACCCTGCGGAGAGGCCTCTGGGGTCTCTGGGCCGTGCCTCGGGGAGAAAGAGCCAGAAGCTCC  518

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct  519  CGTCCCGCTGACCGCGAGCCTTCCTCAGCACCGTCCCGTTTGCCCAGCGCCTCCTCCAACAGGAGGCCCTCAGG  592

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct  593  AGCCCTCCCTGGAGTGGGGACAAAAAGGCGGGGACTGGGCCGAGAAGGGTCCGGCCTTTCCGAAGCCCGCCACC  666

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct  667  ACTGCGTATCTCCACACAGAGCCTGAAAGTGGTAAGGTGGTCCAGGAAGGCTTCCTCCGAGAGCCAGGCCCCCC  740

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct  741  AGGTCTGAGCCACCAGCTCATGTCCGGCATGCCTGGGGCTCCCCTCCTGCCTGAGGGCCCCAGAGAGGCCACAC  814

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct  815  GCCAACCTTCGGGGACAGGACCTGAGGACACAGAGGGCGGCCGCCACGCCCCTGAGCTGCTCAAGCACCAGCTT  888

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct  889  CTAGGAGACCTGCACCAGGAGGGGCCGCCGCTGAAGGGGGCAGGGGGCAAAGAGAGGCCGGGGAGCAAGGAGGA  962

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct  963  GGTGGATGAAGACCGCGACGTCGATGAGTCCTCCCCCCAAGACTCCCCTCCCTCCAAGGCCTCCCCAGCCCAAG  1036

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct 1037  ATGGGCGGCCTCCCCAGACAGCCGCCAGAGAAGCCACCAGCATCCCAGGCTTCCCAGCGGAGGGTGCCATCCCC  1110

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct 1111  CTCCCTGTGGATTTCCTCTCCAAAGTTTCCACAGAGATCCCAGCCTCAGAGCCCGACGGGCCCAGTGTAGGGCG  1184

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct 1185  GGCCAAAGGGCAGGATGCCCCCCTGGAGTTCACGTTTCACGTGGAAATCACACCCAACGTGCAGAAGGAGCAGG  1258

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct 1259  CGCACTCGGAGGAGCATTTGGGAAGGGCTGCATTTCCAGGGGCCCCTGGAGAGGGGCCAGAGGCCCGGGGCCCC  1332

Query  371  --------------------------------------------------------------------------  370
                                                                                      
Sbjct 1333  TCTTTGGGAGAGGACACAAAAGAGGCTGACCTTCCAGAGCCCTCTGAAAAGCAGCCTGCTGCTGCTCCGCGGGG  1406

Query  371  -----------------------------AAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATG  415
                                         |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GAAGCCCGTCAGCCGGGTCCCTCAACTCAAAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATG  1480

Query  416  ACAAAAAAGCCAAGGGGGCTGATGGTAAAACGAAGATCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAG  489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ACAAAAAAGCCAAGGGGGCTGATGGTAAAACGAAGATCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAG  1554

Query  490  GGCCAGGCCAACGCCACCAGGATTCCAGCAAAAACCCCGCCCGCTCCAAAGACACCACCCAGCTCTGGTGAACC  563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GGCCAGGCCAACGCCACCAGGATTCCAGCAAAAACCCCGCCCGCTCCAAAGACACCACCCAGCTCTGGTGAACC  1628

Query  564  TCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCCCCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCC  637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCCCCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCC  1702

Query  638  CGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAGAAGGTGGCAGTGGTCCGTACTCCACCCAAGTCGCCGTCT  711
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAGAAGGTGGCAGTGGTCCGTACTCCACCCAAGTCGCCGTCT  1776

Query  712  TCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCCCATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTC  785
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCCCATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTC  1850

Query  786  CACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGAAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACG  859
            |||||||||||||||||||||||||||||||||||||                                     
Sbjct 1851  CACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGAAG-------------------------------------  1887

Query  860  TCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACGTCCTGGGAGGCGGCAGTGTGCAAATAGTCTACAAA  933
                                                                    ||||||||||||||||||
Sbjct 1888  --------------------------------------------------------GTGCAAATAGTCTACAAA  1905

Query  934  CCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGGCTCATTAGGCAACATCCATCATAAACCAGGAGGTGGCCA  1007
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1906  CCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGGCTCATTAGGCAACATCCATCATAAACCAGGAGGTGGCCA  1979

Query 1008  GGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGGACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCA  1081
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1980  GGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGGACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCA  2053

Query 1082  CCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAAACCCACAAGCTGACCTTCCGCGAGAACGCCAAAGCCAAG  1155
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2054  CCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAAACCCACAAGCTGACCTTCCGCGAGAACGCCAAAGCCAAG  2127

Query 1156  ACAGACCACGGGGCGGAGATCGTGTACAAGTCGCCAGTGGTGTCTGGGGACACGTCTCCACGGCATCTCAGCAA  1229
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2128  ACAGACCACGGGGCGGAGATCGTGTACAAGTCGCCAGTGGTGTCTGGGGACACGTCTCCACGGCATCTCAGCAA  2201

Query 1230  TGTCTCCTCCACCGGCAGCATCGACATGGTAGACTCGCCCCAGCTCGCCACGCTAGCTGACGAGGTGTCTGCCT  1303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2202  TGTCTCCTCCACCGGCAGCATCGACATGGTAGACTCGCCCCAGCTCGCCACGCTAGCTGACGAGGTGTCTGCCT  2275

Query 1304  CCCTGGCCAAGCAGGGTTTG  1323
            ||||||||||||||||||||
Sbjct 2276  CCCTGGCCAAGCAGGGTTTG  2295

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