Nucleotide Global Alignment
Description
- Query:
- TRCN0000488723
- Subject:
- NR_027303.2
- Aligned Length:
- 2974
- Identities:
- 818
- Gaps:
- 2142
Alignment
Query 1 ATGAACATACACAGGTCTACCCCCATCACAATAGCGAGATATGGGAGATCGCGGAACAAAACCCAGGATTTCGA 74
||||.||.| ||
Sbjct 1 --------------------------------------------GAGACCGAG------------------CG- 11
Query 75 AGAGTTGTCGTCTATAAGGTCCGCG-GAGCCCAGCCAGAGTTTCAGCCCGAAC-CTCGGCTCCCCGAGCCCGCC 146
.||| || |||..|||| |.||.|| |.||.|| |.|||| |||||.
Sbjct 12 CGAG----CG------AGGCGCGCGCGCGCACA-------------CGCGCACTCACGGC--------CCCGCT 54
Query 147 CGAGACTCCGAACTTGTCGCATTGCGTTTCTTGTATCGGGAAATACTTATTGTTGGAACCTCTGGAGGGAGACC 220
|| |||||| ||.||
Sbjct 55 CG---CTCCGA--------------------------------------------GATCC-------------- 67
Query 221 ACGTTTTTCGTGCCGTGCATCTGCACAGCGGAGAGGAGCTGGTGTGCAAGGTGTTTGATATCAGCTGCTACCAG 294
||| ||.|.||||||||||||||||||||||||
Sbjct 68 ------------CCG------------------------------GCCACGTGTTTGATATCAGCTGCTACCAG 99
Query 295 GAATCCCTGGCACCGTGCTTTTGCCTGTCTGCTCATAGTAACATCAACCAAATCACTGAAATTATCCTGGGTGA 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 100 GAATCCCTGGCACCGTGCTTTTGCCTGTCTGCTCATAGTAACATCAACCAAATCACTGAAATTATCCTGGGTGA 173
Query 369 GACCAAAGCCTATGTGTTCTTTGAGCGAAGCTATGGGGACATGCATTCCTTCGTCCGCACCTGCAAGAAGCTGA 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 174 GACCAAAGCCTATGTGTTCTTTGAGCGAAGCTATGGGGACATGCATTCCTTCGTCCGCACCTGCAAGAAGCTGA 247
Query 443 GAGAGGAGGAGGCAGCCAGACTGTTCTACCAGATTGCCTCGGCAGTGGCCCACTGCCATGACGGGGGGCTGGTG 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 248 GAGAGGAGGAGGCAGCCAGACTGTTCTACCAGATTGCCTCGGCAGTGGCCCACTGCCATGACGGGGGGCTGGTG 321
Query 517 CTGCGGGACCTCAAGCTGCGGAAATTCATCTTTAAGGACGAAGAGAGGACTCGGGTCAAGCTGGAAAGCCTGGA 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 322 CTGCGGGACCTCAAGCTGCGGAAATTCATCTTTAAGGACGAAGAGAGGACTCGGGTCAAGCTGGAAAGCCTGGA 395
Query 591 AGACGCCTACATTCTGCGGGGAGATGATGATTCCCTCTCCGACAAGCATGGCTGCCCGGCTTACGTAAGCCCAG 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 396 AGACGCCTACATTCTGCGGGGAGATGATGATTCCCTCTCCGACAAGCATGGCTGCCCGGCTTACGTAAGCCCAG 469
Query 665 AGATCTTGAACACCAGTGGCAGCTACTCGGGCAAAGCAGCCGACGTGTGGAGCCTGGGGGTGATGCTGTACACC 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 470 AGATCTTGAACACCAGTGGCAGCTACTCGGGCAAAGCAGCCGACGTGTGGAGCCTGGGGGTGATGCTGTACACC 543
Query 739 ATGTTGGTGGGGCGGTACCCTTTCCATGACATTGAACCCAGCTCCCTCTTCAGCAAGATCCGGCGTGGCCAGTT 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 544 ATGTTGGTGGGGCGGTACCCTTTCCATGACATTGAACCCAGCTCCCTCTTCAGCAAGATCCGGCGTGGCCAGTT 617
Query 813 CAACATTCCAGAGACTCTGTCGCCCAAGGCCAAGTGCCTCATCCGAAGCATTCTGCGTCGGGAGCCCTCAGAGC 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 618 CAACATTCCAGAGACTCTGTCGCCCAAGGCCAAGTGCCTCATCCGAAGCATTCTGCGTCGGGAGCCCTCAGAGC 691
Query 887 GGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTTTAGCGTCTCGAATTCAGCATATGGT 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 692 GGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTTTAGCGTCTCGAATTCAGCATATGGT 765
Query 961 GCTAAGGAAGTGTCTGACCAGCTGGTGCCGGACGTCAACATGGAAGAGAACTTGGACCCTTTCTTTAAC----- 1029
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 766 GCTAAGGAAGTGTCTGACCAGCTGGTGCCGGACGTCAACATGGAAGAGAACTTGGACCCTTTCTTTAACTGAGC 839
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 840 TCATGCCCCACGGAGACTTAGCAGGTTCCAGGAGTGAGCGAGGGCAGCGGAAAGGAGTTCTTCCGGGGGACACG 913
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 914 AATTGCCTGGCTGAGTAGCAAGAAAGACACACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCTTCAAGGAGC 987
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 988 TGACTGACCACGTAGCATGGGGGCAAGAGGCGTGGGATGGGGATTGGGGTGAGATGGATGGGAGCCCGCTGGAG 1061
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1062 CTTGTCTTCCCTAACATAGCCTGGGAGACCACCCCTTGCCACTTGGGCCACTTCCGCCTACCCCACTTTTCATT 1135
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1136 TTGTTCCAAAATAGTTGCAGATCCTGACAGAATCAAAACTCTCTGCCTCAAACACACATCCTGGCATCGCACTG 1209
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1210 TTAGCATTTAACTTCTTGTTAGGATTCAGGGAAGGAACAGTTGGCCAAGAATTTTTTTTCTTTTAAACAAGCCA 1283
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1284 ACCACCTAGCTGGTAATTAATGAGGTTCACTTAAAAAAAAAATTCGGTGCACACAGACTGACATGAAACCTGGG 1357
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1358 TGCTACAGTAAAAGAAAACAAAAGTCCAGTTTGTGTCTCTTAATCGCTCACTTCAACTCATTTCTTCTAAATAA 1431
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1432 ACTATTTAATATCCTGGTCAGGAAATGACATGTTAATGCTTTGCTCCCTGAAGGGGGAAAAAATCTGTCCTTTA 1505
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1506 ACAAGCTATTCTGTTTTGTGTCAATTGGTTCGTGGCAGGAAGCTATTAGAAGTCAAACGTCCAGATGCATTACT 1579
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1580 GCTATCTTAGTTTAAAGGGGGAAAGAAAAGGGAAGAAGAAAGGAAAAGAGAAATCCAACTCCTTTTTCATGTTT 1653
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1654 TGCTTTTGAACAATGAGGGTTTGTGTGACAGGCATTCCTCTTTGCTGAGATGATAGCAATGGCCTGAGATTTTA 1727
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1728 GCAAGCTCCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAACATTTGTCTTTGTTTTATTAGAAAC 1801
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1802 TAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCAGCTATTTAGTTTTCTTTACAGAGAATGAT 1875
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1876 CCTTTTAAGGCTTGTAAGGCCCTCTGGTTTGGACAAAAACCCTCAGTAGAGACAAGCGGGAAGGATAATTAGCT 1949
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 1950 GAAAGCTATGATGATATAAATAAAAACAGCTCTCTATCCCAATACGCACCTTTGTATTTTCAAGAACTCTTCTA 2023
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2024 TTTATTAAGGAAAATGTCACATTGTGATGTATTAAGCCAGTACTTCAATTACGGGTTGACTTGGGATGACATAT 2097
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2098 TACATGCTGTAGTTAACATTTATAATTCTTTTTCCTTGTTTGAGTATTTCTGTCTCTGAAATAACCTTTTACTT 2171
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2172 GGCTTTTCTAGATAGCTTTATTTGATTTCGAGTGGCAAAATGTTTTTTATTACGGCTTTTCTATTGCTGTATGA 2245
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2246 TACAGAACTCTTTTGGCATAAATATTTGTGTTCCCAGTACCTCACTTGTTCGGATTTGACTGCCTGTATATGTT 2319
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2320 TTGTGAAATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCTTC 2393
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2394 ATAATAGTGTGTGGCATGTATGTGCAGACTCTTGGATGCTTTATGCCTGCGCAGCAGGAGCCCTGTCCTCACGT 2467
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2468 TCCCAGGAGGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTGATTCTATTTTGC 2541
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2542 TAATGGAAGATAGAAAGGAGAGAAGGTTTTTTTTTTTTTTAACATTCTGAAGATGGTGCTGTGTCAAGAAGGAC 2615
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2616 CTTTTTTTTCCCCTCTCCCCTATTTTTTAAGTACCTTGGAGGAGGAGAGGTTGGTGACATGCATGGTGGGGATC 2689
Query 1030 -------------------------------------------------------------------------- 1029
Sbjct 2690 TATGGCCTCTGGTGCTTTGTCCTGTATTTGGTTTAATGTTTTTGTCCTAATCTCTTCAATCAATAAAATTGTGC 2763
Query 1030 -------------- 1029
Sbjct 2764 GTATTTAACTAAAA 2777
