Nucleotide Global Alignment
Description
- Query:
- TRCN0000488774
- Subject:
- XM_006522343.1
- Aligned Length:
- 3172
- Identities:
- 1420
- Gaps:
- 1535
Alignment
Query 1 ATGCAGCCAGAGGAGGGCACAGGCTGGCTGCTGGAGCTGCTGTCCGAGGTGCAGCTGCAACAGTACTTCCTGCG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GCTCCGAGATGACCTCAACGTCACCCGCCTGTCCCACTTTGAGTACGTCAAGAATGAGGACCTGGAGAAGATCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GCATGGGTCGGCCTGGCCAGCGGCGGCTGTGGGAGGCTGTGAAGAGGAGGAAGGCCTTGTGCAAACGCAAGTCG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TGGATGAGTAAGGTGTTCAGTGGAAAGCGACTGGAGGCTGAGTTCCCACCTCATCACTCTCAGAGCACCTTCCG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAAGACCTCGCCCGCCCCTGGGGGCCCAGCAGGGGAGGGGCCCCTGCAGAGCCTCACCTGCCTCATTGGGGAGA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGGACCTGCGCCTCCTGGAGAAGCTGGGTGATGGTTCCTTTGGCGTGGTGCGCAGGGGCGAGTGGGACGCGCCC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TCAGGGAAGACGGTGAGTGTGGCTGTGAAGTGCCTGAAGCCCGATGTCCTGAGCCAGCCAGAAGCCATGGACGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CTTCATCCGGGAGGTCAATGCCATGCACTCGCTCGACCACCGAAACCTCATCCGCCTCTACGGGGTGGTGCTCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CGCCGCCCATGAAGATGGTGACAGAGCTGGCACCTCTGGGATCGTTGTTGGACCGGCTACGTAAGCACCAGGGC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CACTTCCTCCTGGGGACTCTGAGCCGCTACGCTGTGCAGGTGGCTGAGGGCATGGGCTACCTGGAGTCCAAGCG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CTTTATTCACCGTGACCTGGCTGCCCGCAATCTGCTGTTGGCTACCCGCGACCTGGTCAAGATCGGGGACTTTG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 GGCTGATGCGAGCACTACCTCAGAATGACGACCATTACGTCATGCAGGAACATCGCAAGGTGCCCTTCGCCTGG 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 TGTGCCCCCGAGAGCCTGAAGACACGCACCTTCTCCCATGCCAGCGACACCTGGATGTTCGGGGTGACACTGTG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GGAAATGTTCACCTACGGCCAGGAGCCCTGGATCGGCCTCAACGGCAGTCAGATCCTGCATAAGATCGACAAGG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 AGGGGGAGCGGCTGCCCCGGCCCGAGGACTGTCCCCAGGACATCTACAACGTCATGGTCCAGTGCTGGGCTCAC 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 AAGCCAGAGGACAGACCCACGTTTGTGGCCCTGCGGGACTTCCTGCTGGAGGCCCAGCCCACAGACATGCGGGC 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 CCTTCAGGACTTTGAGGAACCGGACAAGCTGCACATCCAGATGAATGATGTCATCACCGTCATCGAGGGAAGGG 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CCGAGAACTACTGGTGGCGTGGCCAGAACACACGGACGCTGTGTGTGGGGCCCTTCCCTCGCAACGTGGTGACC 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 TCCGTGGCCGGCCTGTCGGCCCAGGACATCAGCCAGCCCCTGCAGAACAGCTTCATCCACACAGGGCATGGCGA 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 CAGTGACCCCCGCCACTGCTGGGGCTTCCCGGACAGGATTGACGAACTGTATCTGGGAAACCCCATGGACCCCC 1480
||||||||.|
Sbjct 1 ----------------------------------------------------------------ATGGACCCTC 10
Query 1481 CCGACCTCCTGAGCGTGGAACTGAGCACCTCCCGGCCCCCCCAGCATCTAGGAGGGGTGAAA------------ 1542
|.|||||.|||||.||||||||||||||||||||.|||.|||||||.||||||.||||||||
Sbjct 11 CTGACCTGCTGAGTGTGGAACTGAGCACCTCCCGACCCACCCAGCACCTAGGACGGGTGAAAAGGGAGCCTCCA 84
Query 1543 ---------------------------------AAACCAACCTATGACCCTGTGAGCGAGGACCAAGACCCCTT 1583
||.|||||.||.|||||||||||.|||||||.|||||||.|
Sbjct 85 CCTCGCCCACCTCAGCCTGCCATCTTCACTCAGAAGCCAACATACGACCCTGTGAGTGAGGACCCAGACCCCCT 158
Query 1584 GTCCAGCGACTTCAAGAGGCTGGGCCTGCGGAAGCCAGGCCTGCCCCGAGGGCTGTGGCTGGCGAAGCCCTCGG 1657
|||||||||||||||||||||.||||||.|||||||||.||||||.|||||||||||||||||.||||||||.|
Sbjct 159 GTCCAGCGACTTCAAGAGGCTTGGCCTGAGGAAGCCAGCCCTGCCTCGAGGGCTGTGGCTGGCAAAGCCCTCAG 232
Query 1658 CGCGGGTGCCGGGCACCAAGGCCAG-CCGAGGCAGCGGGGCTGAGGTCACGCTCATCGACTTCGGTGAGGAGCC 1730
|.||.|||||.|||||||||| ||| |||..||||.||||.|||||||||.|||||||||||||||||||||||
Sbjct 233 CCCGAGTGCCAGGCACCAAGG-CAGACCGCAGCAGTGGGGGTGAGGTCACACTCATCGACTTCGGTGAGGAGCC 305
Query 1731 CGTGGTCCCGGCCCTACGGCCCTGCGCGCCCTCCCTGGCGCAGCTGGCCATGGACGCCTGCTCCCTGCTGGACG 1804
.||||||||..|||..||||||||.||.||||||.||||.|||.||||||||||.|||||||||.||||||||.
Sbjct 306 TGTGGTCCCAACCCCTCGGCCCTGTGCACCCTCCTTGGCACAGTTGGCCATGGATGCCTGCTCCTTGCTGGACA 379
Query 1805 AGACCCCGCCTCAGAGCCCCACGCGGGCACTGCCCCGGCCCCTGCACCCCACGCCTGTGGTGGACTGGGACGCA 1878
||||.||.||.|||||||||||.|||||||||||.||.||..|.||||||||.||||||||.|||||||||||.
Sbjct 380 AGACACCACCACAGAGCCCCACACGGGCACTGCCACGACCTTTACACCCCACCCCTGTGGTAGACTGGGACGCG 453
Query 1879 CGCCCGCTGCCCCCCCCGCCCGCCTATGACGACGTGGCCCAGGATGAGGATGACTTTGAGATCTGCTCCATCAA 1952
||.|||||||||||.||.||.|||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 454 CGTCCGCTGCCCCCGCCCCCTGCCTATGACGACGTGGCCCAGGATGAGGATGACTTTGAGGTCTGCTCCATCAA 527
Query 1953 CAGCACCCTCGTGGGCGCGGGGGTCCCTGCCGGGCCCAGCCAGGGCCAGACCAACTACGCCTTTGTGCCTGAGC 2026
||||||.||.||.||.||.||..|||||||.|||||.|||||.|||.|||||||.|||||||||||.|||||||
Sbjct 528 CAGCACGCTAGTAGGTGCAGGCCTCCCTGCTGGGCCTAGCCAAGGCGAGACCAATTACGCCTTTGTACCTGAGC 601
Query 2027 AGGCGCGGCCGCCCCCTCCCCTGGAGGACAACCTGTTCCTCCCGCCCCAGGGTGGGGGCAAGCCGCCCAGCTCC 2100
||||||.|..|||||||.||||||||||.|||||||||||.||.||||||||.||.|||||||||||||||||.
Sbjct 602 AGGCGCAGATGCCCCCTGCCCTGGAGGATAACCTGTTCCTTCCACCCCAGGGCGGAGGCAAGCCGCCCAGCTCA 675
Query 2101 GCACAGACCGCAGAGATCTTCCAGGCGCTACAGCAGGAGTGCATGAGGCAACTGCAGGCTCC-----GGCCGGC 2169
|..|||||.||||||||.||||||||.||.|||||||||||.|||.||||.||.|||| ||| ||||.||
Sbjct 676 GTGCAGACTGCAGAGATTTTCCAGGCACTGCAGCAGGAGTGTATGCGGCAGCTACAGG-TCCCCACTGGCCAGC 748
Query 2170 TCCCCGGCCCCCTCTCCCAGCCCGGGGGGTGACGACAAGCCCCAGGTGCCTCCTCGGGTACCCATCCCCCCTCG 2243
| |.|||||||.||.|.|||.||.|||||.|||||||||||||||||.||.||||||||.||.||||||||
Sbjct 749 T----GACCCCCTCCCCGACCCCAGGAGGTGATGACAAGCCCCAGGTGCCACCCCGGGTACCTATTCCCCCTCG 818
Query 2244 GCCCACGCGCCCACACGTCCAGCTGTCTCCAGCCCCCCCGGGCGAGGAGGAGACCAGCCAGTGGCCTGGACCTG 2317
|||||||||.||||..||..||||.||||||||.|||.||||.|||||.|||||.||||.||||||||||||||
Sbjct 819 GCCCACGCGTCCACGTGTGGAGCTATCTCCAGCTCCCTCGGGTGAGGAAGAGACAAGCCGGTGGCCTGGACCTG 892
Query 2318 CTTCCCCTCCCCGGGTGCCTCCGCGGGAGCCCCTGTCCCCTCAAGGCTCGAGGACACCCAGCCCCCTGGTACCA 2391
|.||.||.|||||.||||||||.|||||.||.|||||.||||||||.||.|||||.||.||||||||.||.|||
Sbjct 893 CCTCGCCCCCCCGAGTGCCTCCCCGGGAACCTCTGTCTCCTCAAGGTTCAAGGACCCCAAGCCCCCTAGTGCCA 966
Query 2392 CCTGGCAGCTCCCCGCTGCCACCCCGGCTCTCAAGCTCACCTGGGAAGACCATGCCCACCACCCAGAGCTTTGC 2465
|||||||||||.||.||.||.|..||||||||.|||||||||||.|||||||||||||||||.||.||||||||
Sbjct 967 CCTGGCAGCTCTCCACTACCGCATCGGCTCTCTAGCTCACCTGGAAAGACCATGCCCACCACTCAAAGCTTTGC 1040
Query 2466 CTCAGACCCCAAGTACGCCACCCCCCAGGTGATCCAGGCCCCTGGCCCGCGGGCTGGTCCCTGCATCCTGCCCA 2539
|||||||||.|||||.|||||.||.||.|||||||||||.||||||||.|||||.||.||||||||||||||||
Sbjct 1041 CTCAGACCCTAAGTATGCCACTCCACAAGTGATCCAGGCTCCTGGCCCACGGGCAGGCCCCTGCATCCTGCCCA 1114
Query 2540 TCGTCCGGGATGGCAAGAAGGTCAGCAGCACCCACTATTACTTGCTGCCCGAGCGACCATCC-TACCTGGAGCG 2612
|.|||||.|||||||.|||||||||||||||.||.||.|||.|||||||.||||| ||.||| ||||||||.||
Sbjct 1115 TTGTCCGCGATGGCAGGAAGGTCAGCAGCACTCATTACTACCTGCTGCCTGAGCG-CCCTCCTTACCTGGAACG 1187
Query 2613 CTACCAGCGCTTCCTGCGTGAGGCCCAGAGCCCCGAGGAGCCTACCCCCCTGCCTGTGCCTCTGCTGCTGCCCC 2686
|||.||||||||||||||.||||||||||||||.||.|||||..||.|||||||||||||.|.||||.||||||
Sbjct 1188 CTATCAGCGCTTCCTGCGGGAGGCCCAGAGCCCGGAAGAGCCGGCCGCCCTGCCTGTGCCCCCGCTGTTGCCCC 1261
Query 2687 CACCCAGCACCCCAGCCCCCGCCGCCCCCACGGCCACCGTGCGGCCGATGCCCCAGGCTGCCTTGGACCCCAAG 2760
|.|||||.||.||||||||.||.||||||||.||||||||..|.||.|||||.|||||.|||...|||||.|||
Sbjct 1262 CGCCCAGTACTCCAGCCCCTGCTGCCCCCACTGCCACCGTCAGACCTATGCCTCAGGCCGCCCCAGACCCAAAG 1335
Query 2761 GCCAACTTCTCCACCAACAACAGCAACCCAGGGGCCCGGCCACCACCCCCGAGGGCCACTGCTCGGCTGCCACA 2834
|||||||||||||||||.|||||||||||||||||.|||||||||.|||.|||||||||.||||||||||||||
Sbjct 1336 GCCAACTTCTCCACCAATAACAGCAACCCAGGGGCACGGCCACCATCCCTGAGGGCCACGGCTCGGCTGCCACA 1409
Query 2835 GAGGGGCTGCCCTGGCGATGGGCCAGAGGCGGGCCGGCCAGCAGACAAGATCCAGAT------GGCCATGGTGC 2902
||||||||||||.||.||.||||.||||||.|..|||||||||||||||.||||||| |||||||||||
Sbjct 1410 GAGGGGCTGCCCAGGGGACGGGCAAGAGGCTGCTCGGCCAGCAGACAAGGTCCAGATGCTGCAGGCCATGGTGC 1483
Query 2903 ATGGGGTGACCACAGAGGAGTGCCAGGCGGCCCTGCAGTGCCACGGCTGGAGCGTGCAGAGGGCTGCCCAGTAT 2976
||||||||||||||||||||||||||||||||||||||.|||||.|||||||.||.||||||||||||||||||
Sbjct 1484 ATGGGGTGACCACAGAGGAGTGCCAGGCGGCCCTGCAGAGCCACAGCTGGAGTGTTCAGAGGGCTGCCCAGTAT 1557
Query 2977 CTGAAGGTGGAGCAGCTCTTCGGGCTGGGTCTGCGGCCCAGAGGGGAGTGCCACAAAGTGCTGGAGATGTTCGA 3050
||||||||||||||||||||.|||||||||||.|||||..|.|.||||||||||||.||.||.|||||||||||
Sbjct 1558 CTGAAGGTGGAGCAGCTCTTTGGGCTGGGTCTTCGGCCACGGGTGGAGTGCCACAAGGTCCTAGAGATGTTCGA 1631
Query 3051 CTGGAACCTGGAGCAGGCCGGCTGCCACCTTCTGGGCTCCTGGGGCCCTGCCCACCACAAGCGC 3114
|||||||||.|||||.||||||||.|||||||||||||||||.||||||||.||.|||||.|||
Sbjct 1632 CTGGAACCTAGAGCAAGCCGGCTGTCACCTTCTGGGCTCCTGTGGCCCTGCTCATCACAAACGC 1695
