Nucleotide Global Alignment

Description

Query:
TRCN0000488868
Subject:
XR_375499.2
Aligned Length:
3866
Identities:
1304
Gaps:
2372

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCCGGCTAGATAGACGAACGCCGAGAAGCTGTGGCGCATGCGCAATACCGGGGTTTCCTTGGCCGCCCACCCTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCGAGCGGTGGAGTTGGGGATAAACAGGCAGTGGCTGGGGAGGTGAGGGAGGGGGGGCATTCGCTTTTGGGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCACCTCAGGTGCCTAGGTTTTCCTTTAGGTTTGTTCTATCCGAGACGCGGGACTCCCGGGGCCCGGCTCAAGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTTCCTGTCTGGTAAGAGAAGGTAGCTTTGGCGGAGAGCAGTTCAAGTTGCTAGGAAGGTGCGAGACTGCAGCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTCCCCCATGCCGGGCAAGTGGTGCGGTCCTGAGCTTGTCCTGGAGCCTGAACAACGCCTGTGAGAAGCCCGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GAACGCGGGTTCTGTGAAGAGACGTGGGGAAGATTCGATTCCGAGAAAAGGAAAAGCCGGATTGAAAGGGAGCG  444

Query    1  -----------------------------ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCA  45
                                         ||||||||.||||||||.|||||..||   .|||.|||.||||||
Sbjct  445  AAGCCGCTGAGGGGGAGGGGGCTGCCAAGATGGCGTCCGCCTCCTCAGGGCCAGCG---GCGGCCGGGTTTTCA  515

Query   46  TCCTTTGATCCCGCGGTCCCTTCCTGTACCTTGTCCTCAGCATCTGGAATCAAGAGACCCATGGCATCTGAGGT  119
            |||.|||||.|||.||.||||.|..|||||   .|..||||||||||||||||||||.|||..|.||||||||.
Sbjct  516  TCCCTTGATGCCGGGGCCCCTGCTGGTACC---GCAGCAGCATCTGGAATCAAGAGAGCCACAGTATCTGAGGG  586

Query  120  GCCTTATGCCTCTGGCATGCCCATCAAGAAAATAGGCCATAGAAGTGTTGATTCCTCAGGAGAGACAACATATA  193
            .||||..|||||||.||||||..|.||.||||||||||||.||||||||||||||||.||||||||.|||||.|
Sbjct  587  ACCTTCCGCCTCTGTCATGCCTGTTAAAAAAATAGGCCATCGAAGTGTTGATTCCTCTGGAGAGACTACATACA  660

Query  194  AAAAGACAACCTCATCAGCCTTGAAAGGTGCCATCCAGTTAGGCATTACCCACACTGTGGGGAGCCTGAGTACC  267
            |.||||||||.|||||||||||||||||||||||||||||||||||.||.|||||||||||.||||||||.|||
Sbjct  661  AGAAGACAACTTCATCAGCCTTGAAAGGTGCCATCCAGTTAGGCATCACTCACACTGTGGGCAGCCTGAGCACC  734

Query  268  AAACCAGAGCGTGATGTCCTCATGCAAGATTTCTACGTGGTTGAGAGTATCTTCTTTCCCAGTGAAGGGAGCAA  341
            |||||||||||||||||||||||||||||.|||||||||||.|||||.|||||.||.|||||||||||.|||||
Sbjct  735  AAACCAGAGCGTGATGTCCTCATGCAAGACTTCTACGTGGTGGAGAGCATCTTTTTCCCCAGTGAAGGCAGCAA  808

Query  342  CCTGACCCCTGCTCATCACTACAATGACTTTCGTTTCAAGACCTATGCACCTGTTGCCTTCCGCTACTTCCGGG  415
            ||||||.||.|||||.||.||||||||||||||.||||||||||||||.||||||||||||||.||||||.|.|
Sbjct  809  CCTGACACCGGCTCACCATTACAATGACTTTCGATTCAAGACCTATGCGCCTGTTGCCTTCCGTTACTTCAGAG  882

Query  416  AGCTATTTGGTATCCGGCCCGATGATTACTTGTATTCCCTCTGCAGTGAGCCGCTGATTGAACTCTGTAGCTCT  489
            ||||.|||||.||||||||.||||||||||||||.|||||.|||||||||||..||||||||||||..|..|||
Sbjct  883  AGCTCTTTGGCATCCGGCCTGATGATTACTTGTACTCCCTTTGCAGTGAGCCATTGATTGAACTCTCCAATTCT  956

Query  490  GGAGCTAGTGGTTCCCTATTCTATGTGTCCAGCGACGATGAGTTCATTATTAAGACAGTCCAACATAAAGAGGC  563
            |||||||||||||||||.||||||||||||||.||.|||||.|||||.||||||||.|||||.||||||||.||
Sbjct  957  GGAGCTAGTGGTTCCCTCTTCTATGTGTCCAGTGATGATGAATTCATCATTAAGACCGTCCAGCATAAAGAAGC  1030

Query  564  GGAATTTCTGCAGAAGCTGCTTCCAGGATACTACATGAACCTCAACCAGAACCCTCGGACTTTGCTGCCTAAAT  637
            .|||||||||||||||.||||||||||||||||||||||.||.|||||.||||||||.|||||||||||.||||
Sbjct 1031  AGAATTTCTGCAGAAGTTGCTTCCAGGATACTACATGAATCTTAACCAAAACCCTCGTACTTTGCTGCCCAAAT  1104

Query  638  TCTATGGACTGTACTGTGTGCAGGCAGGTGGCAAGAACATTCGGATTGTGGTGATGAACAATCTTTTACCAAGA  711
            |.||||||.|||||||||||||.|||||.|||||||||||.||.||||||||||||||||||||.||.||..|.
Sbjct 1105  TTTATGGATTGTACTGTGTGCAAGCAGGCGGCAAGAACATACGAATTGTGGTGATGAACAATCTCTTGCCTCGG  1178

Query  712  TCGGTAAAAATGCATATCAAATATGACCTCAAAGGCTCAACCTACAAACGGCGGGCTTCCCAGAAAGAGCGAGA  785
            ||.||.|||||||||||.|||||||||||.||.||.|||||.|||||.|||||||||||.||||||||.|||||
Sbjct 1179  TCAGTCAAAATGCATATGAAATATGACCTGAAGGGTTCAACTTACAAGCGGCGGGCTTCTCAGAAAGAACGAGA  1252

Query  786  GAAGCCTCTTCCCACATTTAAAGACCTAGACTTCTTACAAGACATCCCTGATGGTCTTTTTTTGGATGCTGACA  859
            |||..||||.|||||.|||||||||||.||||||.|||||||.||||||||.||.||.||||||||||||||||
Sbjct 1253  GAAAACTCTCCCCACCTTTAAAGACCTGGACTTCCTACAAGATATCCCTGACGGCCTATTTTTGGATGCTGACA  1326

Query  860  TGTACAACGCTCTCTGTAAGACCCTGCAGCGTGACTGTTTGGTGCTGCAGAGCTTCAAGATAATGGATTATAGC  933
            ||||||..|||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||.||.|||
Sbjct 1327  TGTACAGTGCTCTGTGTAAGACTCTACAGCGTGACTGTTTGGTGCTGCAGAGCTTCAAGATAATGGACTACAGC  1400

Query  934  CTCTTGATGTCAATCCATAATATAGATCATGCACAACGAGAGCCCTTAAGCAGTGAAACACAGTACTCAGTTGA  1007
            ||.||||||||.|||||.||.||.||.||||||||..|.||||||...||||.|||.|||||||||||.|.|||
Sbjct 1401  CTGTTGATGTCCATCCACAACATGGACCATGCACAGAGGGAGCCCACGAGCAATGACACACAGTACTCGGCTGA  1474

Query 1008  TACTCGAAGACCGGCCCCCCAAAAGGCTCTGTATTCCACAGCCATGGAATCCATCCAGGGAGAGGCTCGACGGG  1081
            .||.||.|||||.|||||.||.|||||.||.|||||||||||.|||||||||||||||||.|||||||||||||
Sbjct 1475  CACGCGCAGACCAGCCCCACAGAAGGCGCTCTATTCCACAGCTATGGAATCCATCCAGGGCGAGGCTCGACGGG  1548

Query 1082  GTGGTACCATGGAGACTGATGACCATATGGGTGGCATCCCTGCCCGGAATAGTAAAGGGGAAAGGCTTCTGCTT  1155
            |.||.||..||||||||||.|||||.|||||||||||||||||||||||||..|||||.||||||||.||||||
Sbjct 1549  GCGGCACTGTGGAGACTGAGGACCACATGGGTGGCATCCCTGCCCGGAATAACAAAGGAGAAAGGCTCCTGCTT  1622

Query 1156  TATATTGGCATCATTGACATTCTACAGTCTTACAGGTTTGTTAAGAAGTTGGAGCACTCTTGGAAAGCCCTGGT  1229
            |||||||||||||||||.|||||.|||||.||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1623  TATATTGGCATCATTGATATTCTTCAGTCCTACAGGTTTGTTAAGAAGTTGGAGCACTCTTGGAAAGCACTGGT  1696

Query 1230  ACATGACGGAGACACTGTCTCAGTGCATCGCCCAGGCTTCTACGCTGAACGGTTCCAGCGCTTCATGTGCAACA  1303
            .|||||.||.||.||.||.|||||||||||.|||||||||||.|||||.|||||||||||.|||||||||||||
Sbjct 1697  CCATGATGGGGATACGGTGTCAGTGCATCGTCCAGGCTTCTATGCTGAGCGGTTCCAGCGTTTCATGTGCAACA  1770

Query 1304  CAGTATTTAAGAAGATTCCCT-----------------------------------------------------  1324
            ||||.||.|||||||||||||                                                     
Sbjct 1771  CAGTGTTCAAGAAGATTCCCTGTAAGTGGCTTCTACCAGATGATCCCCCAGTGGCTCCCTTCCCCCAAGACATG  1844

Query 1325  --------------------------------------------------------------------------  1324
                                                                                      
Sbjct 1845  GGGGGCAAGACACCTCTGTCAGGGAGCTGCCAAGGCCAGAGGCCTCTCCTGCTCTGCCTACATCCTGTGAGCGC  1918

Query 1325  --------------------------------------------GCGTT-------------------------  1329
                                                        |||||                         
Sbjct 1919  TGCTTCTCGTCCTTGTGTCAGTCACTGTCTGTCCCAGTGTTTCCGCGTTGCTGCTCCCCCCTGGCTCTCCCTAC  1992

Query 1330  --------------------------------------------------------------------------  1329
                                                                                      
Sbjct 1993  ATGTATCGTCGAGTGAAGCCTTCTCCTACCAAAAAGTTTCGGTCTGGCCCGTCTTTCTCTCGGCGATCAGGCCC  2066

Query 1330  --------------------------------------------------------------------------  1329
                                                                                      
Sbjct 2067  CAGCGGCAACTCCTGCACCTCCCAGCTGATGGCCTCTGGGGAACACAGAGCACAAGTGACCACCAAGGCGGAAG  2140

Query 1330  --------------CACCTTGGTCGTCCTGATGTTTTACCTCAGACTCCACCTTTGGAGGAAATCAGTGAGGGC  1389
                          ||||||||.|||||||||||.|||||||||||||||||||||||||||||.||||||||.
Sbjct 2141  TGGAGCCAGATGTACACCTTGGGCGTCCTGATGTCTTACCTCAGACTCCACCTTTGGAGGAAATAAGTGAGGGT  2214

Query 1390  TCGCCTATTCCTGACCCCAGTTTCTCACCTCTAGTTGGAGAGACTTTGCAAATGCTAACTACAAGTACAACCTT  1463
            ||.|||.||||||.||||||||||||||||.||||||||.|..||||||||||.||||.|...|||.|||||||
Sbjct 2215  TCACCTGTTCCTGGCCCCAGTTTCTCACCTGTAGTTGGACAACCTTTGCAAATACTAAATTTGAGTTCAACCTT  2288

Query 1464  GGAAAAGCTTGAAGTTGCAGAGTCAGAGTTCACCCAT-------------------------------------  1500
            ||||||||||||.|||||||||||||||||||||||.                                     
Sbjct 2289  GGAAAAGCTTGATGTTGCAGAGTCAGAGTTCACCCACTGAGCAGTGAGCCTCAGAAGACCTGAAACAAGACTCT  2362

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 2363  GCTGTCGCTTTGATCCCAAGATGTCAGCCCTTGCCCCAGGAATGCTGAATCGTCTTCTTGGTCATCAACAGAGG  2436

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 2437  AGAGAATGTGGAGCTAGCAGGGCTCTGACACTGTCTCCCCTTCCTCTGGGCAGTAGTGCCTTTGACAGTTGAGG  2510

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 2511  ACAGCATCGTCCCCACCACTCCAGAAGTGGGTGGCGTGAATTTTCCACTGCCTGCCATGGCTTCTATAGCTGAA  2584

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 2585  TATTTTTCAAACCCCCATTCTTTGTGCTGACATGGGGTTGCTGGACTGGTGGTTTCCTCCTGTTTACCTTTCTC  2658

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 2659  CTGGAGCTGGACTCTTCATTTCCTCAGGACGGACTGGCTGGACATTGTTCCTGCCTTGGCTCTCCCGCTGGTCT  2732

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 2733  TTGGAGACTCCCAATGATTTGTATAAAGGTGTTTGGGGGAAAGTAAGGATCATCCTTACTCCCAACCTTCTTTT  2806

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 2807  CCTTAAAAAAGGAAAAAAAAAAAAAAAAAAAACACAAAGAGCACACAATGTAAATTTGAGCCAGTCTCAGATAA  2880

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 2881  AAGTTCTCTAAGTGTTGTAGAAGAGCCCTAGTGTTTGTGAAGCAGAAAGGCTGGGGCTGCCCCACCAGCAGCTG  2954

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 2955  CTCTCTGACTCCCTCACTTAGGGTTGAGGGAATAGAGAGGGCCTGGCCCTTTTTTAAGACAAAGGGGCAGCCAT  3028

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 3029  GTTAGGAGAGTGGACCTTAGCAGGACCCTACTCACTGCCAGGTCTTCGGTTATTACTATTCTGCAATTTGGAAT  3102

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 3103  GTATCCTCATAGTTTTTTCTAGATATAAAGAATTATCAAATGATTTTAGACCATTCTCCAAAGGAGATTTCTTT  3176

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 3177  GTTCTTCCTATATTTTCCAACAGTATTCTGCTCTTTGTGGAGCTACGGTGGAGGGAGATGTTTGTGTCTGTTTA  3250

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 3251  ACAGGCAGTCTGTATCTATGAGGCTAGAGAATATTTTCTTAAACTCCTAGGGAGCCACAGACTTCCCTCTGTAC  3324

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 3325  GGTTGTCGCCATGTCACCTGGCCTGCCCTTACTCTGCAGAGAAGCTGGAAATGGGGCCACGGAGCCCTCTCCTT  3398

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 3399  CCTCTCAGTTGTGGCCCATCTGGTCCTGGCTGGTGGGGCAGTGCATGGTGTTTCAGGCTGGCTGTTGAAATCCC  3472

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 3473  ACATTAGTTCCTTCCCTGTCCCGTCCCACCTTGATAGCAGGTTAGCCAACCCCCACGTAACTGTCTATATTAGA  3546

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 3547  CACCCCCAGCCACCTTCTGGCTGCCTGTCTTTGCTGCCATGTTCTTTTTTACAAGAAGGAAACAAACAATTTCT  3620

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 3621  TGCTATTTTTTTTTCATAATTTACTATTTATGATGTATTTAAGTGTTTTATTCAGGACAGGGTTCTGTAAGGGG  3694

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 3695  TGGGAGGGAGTATTTGAGGGAGGGCTGGGACTTAGGGAAAGGACATGGGATTCAACATTTTTATGGAGTGTTAC  3768

Query 1501  --------------------------------------------------------------------------  1500
                                                                                      
Sbjct 3769  TATTTGCCTCTACTTTGTATTGTTGAAAAATGACAGATGCAATATAAAAGTAATAAATATCTGGTTTTAATGTA  3842

Query 1501  ------------------  1500
                              
Sbjct 3843  TTAAAGTTCTAGCAATCA  3860

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