Nucleotide Global Alignment

Description

Query:
TRCN0000488970
Subject:
XM_006512003.3
Aligned Length:
2324
Identities:
1913
Gaps:
104

Alignment

Query    1  ATGGCAGGATTTAAGCGAGGGTATGATGGAAAGATTGCTGGATTATATGATCTGGATAAAACCTTGGGTCGAGG  74
            ||||||||.||.||||||||.||||||||.||.|||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCAGGGTTCAAGCGAGGATATGATGGGAAAATTGCTGGATTATATGATCTGGATAAAACCTTGGGTCGAGG  74

Query   75  CCATTTTGCCGTGGTTAAACTTGCCAGGCATGTCTTTACGGGTGAAAAGGTGGCAGTAAAAGTTATTGACAAGA  148
            .||||||||.|||||.||||||||||||||||||||.||.|||||.|||||||||||.|||||.||||||||||
Sbjct   75  TCATTTTGCAGTGGTCAAACTTGCCAGGCATGTCTTCACAGGTGAGAAGGTGGCAGTGAAAGTCATTGACAAGA  148

Query  149  CAAAACTGGACACTCTAGCTACTGGTCATCTTTTCCAGGAAGTGAGATGCATGAAACTAGTGCAGCATCCTAAC  222
            |.||.||||||||||||||.|||||||||||.||||||||||||||.||||||||||||||||||||.||.|||
Sbjct  149  CGAAGCTGGACACTCTAGCCACTGGTCATCTCTTCCAGGAAGTGAGGTGCATGAAACTAGTGCAGCACCCCAAC  222

Query  223  ATCGTCCGCCTTTATGAAGTTATTGACACCCAGACCAAACTATATCTTATTCTAGAACTTGGGGATGGAGGAGA  296
            ||.||.||.||.||||||||.||.|||||||||||||||||.|||||.||||||||||||||.|||||||||||
Sbjct  223  ATTGTGCGTCTCTATGAAGTCATAGACACCCAGACCAAACTTTATCTCATTCTAGAACTTGGAGATGGAGGAGA  296

Query  297  TATGTTTGATTATATAATGAAACATGAGGAGGGTCTTAATGAAGACTTGGCCAAGAAGTATTTTGCTCAGATAG  370
            |||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct  297  TATGTTTGATTATATAATGAAGCACGAGGAGGGTCTTAATGAAGACTTGGCCAAGAAGTACTTTGCTCAGATAG  370

Query  371  TTCATGCTATATCTTATTGCCATAAACTCCATGTGGTTCACAGAGACTTAAAACCAGAGAATGTAGTCTTCTTT  444
            |||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||.|||
Sbjct  371  TTCATGCTATATCTTATTGCCATAAACTCCATGTGGTCCACAGAGACTTGAAACCAGAGAATGTAGTCTTTTTT  444

Query  445  GAAAAACAAGGTCTTGTAAAGTTGACAGACTTTGGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACTAC  518
            |||||||||||||||||.|||||||||||||||||.|||||||||||||||||.||.||.|||||.|||||.||
Sbjct  445  GAAAAACAAGGTCTTGTGAAGTTGACAGACTTTGGCTTCAGCAACAAATTTCAGCCTGGAAAGAAACTCACCAC  518

Query  519  AAGCTGTGGATCTCTTGCATATTCCGCTCCAGAAATTCTGCTTGGTGATGAGTATGATGCACCTGCAGTAGATA  592
            .|||||.||.|||||||||||.||.|||||||||||.||||||||.||||||||.|||||.|||||||||||.|
Sbjct  519  GAGCTGCGGGTCTCTTGCATACTCTGCTCCAGAAATCCTGCTTGGCGATGAGTACGATGCCCCTGCAGTAGACA  592

Query  593  TTTGGAGTCTGGGAGTGATCCTTTTCATGTTGGTGTGTGGGCAGCCGCCCTTTCAAGAAGCCAATGACAGTGAA  666
            |.|||||.|||||.|||||||||||||||.||||||||||||||||.|||||.|||||||||||.|||||.||.
Sbjct  593  TATGGAGCCTGGGCGTGATCCTTTTCATGCTGGTGTGTGGGCAGCCACCCTTCCAAGAAGCCAACGACAGCGAG  666

Query  667  ACACTGACAATGATCATGGATTGCAAATATACAGTACCATCCCATGTGTCTAAAGAGTGTAAAGACCTAATCAC  740
            ||||||||.|||||||||||.|||||.||.||.||.|||.|||..||||||..||.|||.|..|||||.|||||
Sbjct  667  ACACTGACCATGATCATGGACTGCAAGTACACGGTGCCACCCCGCGTGTCTGCAGGGTGCAGGGACCTGATCAC  740

Query  741  ACGGATGCTACAGAGAGATCCCAAGAGAAGGGCTTCTTTAGAAGAGATTGAAAATCATCCTTGGCTTCAGGGAG  814
            |||.||||||||||||||.|||||.||.||.||.|||.|.|||||||||||||..||.||||||||.|||||||
Sbjct  741  ACGAATGCTACAGAGAGACCCCAAAAGGAGAGCCTCTCTGGAAGAGATTGAAAGCCACCCTTGGCTCCAGGGAG  814

Query  815  TGGACCCTTCACCAGCTACAAAGTATAACATTCCCCTTGTGTCATACAAAAATCTCTCGGAAGAGGAGCACAAC  888
            |||||||.||||||||.||.|||||||||||||||||.|||||.|||||.||.|||||.||.||.|||||||||
Sbjct  815  TGGACCCATCACCAGCCACCAAGTATAACATTCCCCTCGTGTCCTACAAGAACCTCTCCGAGGAAGAGCACAAC  888

Query  889  AGCATCATTCAGCGCATGGTGCTTGGGGACATAGCGGATCGAGACGCCATTGTAGAAGCCCTGGAAACCAACAG  962
            ||||||||.||||||||||||||.||||||||.|||||.|||||||||||.|||||||||||||||||||||||
Sbjct  889  AGCATCATCCAGCGCATGGTGCTCGGGGACATCGCGGACCGAGACGCCATCGTAGAAGCCCTGGAAACCAACAG  962

Query  963  GTATAACCATATCACAGCCACATACTTCCTGCTGGCTGAAAGGATCCTGAGAGAAAAGCAAGAGAAAGAAATAC  1036
            |||.|||||.||.||.|||||.|||||..|.||.||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GTACAACCACATTACCGCCACTTACTTTTTACTTGCTGAAAGGATCCTGAGAGAAAAGCAAGAGAAAGAAATAC  1036

Query 1037  AGACCAGATCTGCAAGCCCGAGCAATATCAAGGCCCAGTTTAGGCAGTCATGGCCAACCAAAATTGATGTACCC  1110
            |||||||.|||||.|||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGACCAGGTCTGCTAGCCCCAGCAACATCAAGGCCCAGTTTAGGCAGTCATGGCCAACCAAAATTGATGTACCC  1110

Query 1111  CAGGACCTTGAGGATGACCTCACGGCCACTCCTTTGTCCCACGCGACTGTCCCTCAGTCTCCTGCTCGGGCTGC  1184
            ||.||||||||.|||||.|||||.|||||.|||.||||.||.||.||.|||||.||||||||||||.||||||.
Sbjct 1111  CAAGACCTTGAAGATGATCTCACTGCCACCCCTCTGTCACATGCCACAGTCCCGCAGTCTCCTGCTAGGGCTGG  1184

Query 1185  TGACAGTGTCCTCAATGGCCACAGGAGCAAAGGCCTGTGTGACTCAGCTAAGAAAGATGACCTCCCTGAGTTGG  1258
            |||||.|||||||||||||||||||||||||||||||||||||.||||.|||||||||||.|||||.|||.|||
Sbjct 1185  TGACAATGTCCTCAATGGCCACAGGAGCAAAGGCCTGTGTGACCCAGCCAAGAAAGATGAGCTCCCGGAGCTGG  1258

Query 1259  CTGGACCAGCACTCTCTACGGTGCCACCCGCAAGCTTAAAACCCACAGCCAGTGGGCGGAAGTGTCTGTTCAGG  1332
            ||||.||.|||||.||.||.||.|||||.||||||.|.||.|||.|||||||||||||.||||||||.||||||
Sbjct 1259  CTGGGCCGGCACTGTCCACTGTTCCACCTGCAAGCATGAAGCCCGCAGCCAGTGGGCGCAAGTGTCTCTTCAGG  1332

Query 1333  GTGGAAGAAGATGAAGAGGAAGATGAGGAGGACAAGAAACCCATGTCCCTCTCAACACAAGTGGTTTTGCGCCG  1406
            ||||||||||||||.|||||.|||||||||||||||||.||..|||||||.||.||.||.|||||..|||||||
Sbjct 1333  GTGGAAGAAGATGAGGAGGAGGATGAGGAGGACAAGAAGCCTGTGTCCCTGTCCACGCAGGTGGTGCTGCGCCG  1406

Query 1407  GAAGCCATCTGTAACCAACCGCCTGACATCCAGGAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGGAAGGGG  1480
            |||||||||.||.|||||.||||||||.||..|.||||||||.||.||.||||||||||||||.|||||.||.|
Sbjct 1407  GAAGCCATCGGTCACCAATCGCCTGACGTCTCGCAAGAGTGCCCCAGTGCTCAACCAGATCTTCGAGGAGGGCG  1480

Query 1481  AATCTGACGATGAGTTTGACATGGATGAGAATCTGCCTCCCAAGTTGAGCAGGTTAAAGATGAATATAGCTTCT  1554
            |.||.|||||.||||||||||||||.|||||.|||||.||||||.|||||.||.|.||||||||.||.||.||.
Sbjct 1481  AGTCAGACGACGAGTTTGACATGGACGAGAACCTGCCGCCCAAGCTGAGCCGGCTGAAGATGAACATTGCCTCA  1554

Query 1555  CCAGGTACAGTTCACAAACGCTACCACCGGAGGAAAAGTCAGGGCCGGGGCTCCAGCTGCAGTAGTTCGGAGAC  1628
            |||||.|||||.|||||.|||||||||||.||||||||.||||||||||||||.||||||||.||.||.|||||
Sbjct 1555  CCAGGCACAGTGCACAAGCGCTACCACCGCAGGAAAAGCCAGGGCCGGGGCTCTAGCTGCAGCAGCTCTGAGAC  1628

Query 1629  CAGTGATGATGATTCTGAAAGCCGGCGGCGGCTCGATAAAGATAGCGGGTTCACCTACTCCTGGCACCGACGGG  1702
            |||.|||||.||.||.||.|||||||||.||||.||.||.||.|||||.||..|.|||||.||||||||.||.|
Sbjct 1629  CAGCGATGACGACTCCGAGAGCCGGCGGAGGCTGGACAAGGACAGCGGCTTTGCTTACTCGTGGCACCGGCGTG  1702

Query 1703  ATAGCAGCGAGGGGCCCCCTGGCAGTGAGGGGGATGGCGGGGGCCAGAGCAAGCCAAGCAATGCCAGTGGAGGG  1776
            |.|||||.||||||||.||.|||||.|||||.|||||.||.||||||||||||||.||||   .|.||||.||.
Sbjct 1703  ACAGCAGTGAGGGGCCACCAGGCAGCGAGGGCGATGGTGGCGGCCAGAGCAAGCCTAGCA---GCGGTGGCGGT  1773

Query 1777  GTGGACAAGGCCAGCCCCAGTGAGAA---CAATGCTGGTGGGGGCAGTCCCTCCA--GCGGCTCGGGTGGCAAC  1845
            |||||||||||||||||..|||||.|   ||   |.|||||.|||||     |||  |.|||||.|||||.|.|
Sbjct 1774  GTGGACAAGGCCAGCCCGGGTGAGCAGGGCA---CGGGTGGTGGCAG-----CCAGGGAGGCTCTGGTGGGACC  1839

Query 1846  CCCACCAATACATC-GGGTACCACACGCCGCTGTGCCGGCCC-----CAGCAACTCCAT-----------GCAG  1902
            ||..|...||||.| |||| ||.||.|.||||||||.|||||     ||.|..|.||.|           ||..
Sbjct 1840  CCGTCGGGTACAGCAGGGT-CCTCAAGGCGCTGTGCAGGCCCTGACTCATCCTCACCCTCCCCCGCCTCAGCCT  1912

Query 1903  CTGGCCTCTCGCA-GTGCTGGGGAGCTCGTTGAGAGCCTCAAACTCATGAGCCTCTGCCTCGGCTCCCAGCTTC  1975
            || |||.||| || |||.||..|||||.||..||||||||||||||.|||||||.|||||.|||||.|||||.|
Sbjct 1913  CT-GCCGCTC-CACGTGGTGCAGAGCTTGTGCAGAGCCTCAAACTCGTGAGCCTGTGCCTAGGCTCACAGCTGC  1984

Query 1976  ATGGGAGCACCAAGTACATTATTGATCCACAGAATGGCTTGTCATTTTCCAGTGTGAAAGTCCAAGAGAAATCT  2049
            |||   ||.|||||||||||.|.||.||.|||||.|.||||   ||.|||||.|||||.||.||.|||||.||.
Sbjct 1985  ATG---GCGCCAAGTACATTCTGGACCCGCAGAAGGCCTTG---TTCTCCAGCGTGAAGGTGCAGGAGAAGTCC  2052

Query 2050  ACGTGGAAAATGTGCATTAGCTCCACAGGGAATGCAGGGCAGGTCCCTGCAGTGGGCGGCATAAAGTTTTTCT-  2122
            ||||||||.||||||||.|||.||.||||               |||  ||    ||..|          ||| 
Sbjct 2053  ACGTGGAAGATGTGCATCAGCGCCCCAGG---------------CCC--CA----GCCCC----------TCTG  2095

Query 2123  CTGACCACATGGCAGATACCACCACTGAATTGGAACGGATAAAGAGCAAGAACCTGAAAAATAACGTGCTGCAG  2196
            ||||||                        |.||.|.|.|.|.||.||||||.||||..||.||||.|||.|||
Sbjct 2096  CTGACC------------------------TTGACCCGGTGAGGACCAAGAAGCTGAGGAACAACGCGCTCCAG  2145

Query 2197  CTACCTCTGTGCGAAAAGACCATCTCTGTGAACATCCAGCGGAACCCTAAGGAGGGGCTGCTGTGCGCATCCAG  2270
            ||||||||||||||||||||||||||.||||||||||||||.|.||..|||||.||||||||.|||||.|||||
Sbjct 2146  CTACCTCTGTGCGAAAAGACCATCTCCGTGAACATCCAGCGCAGCCGCAAGGAAGGGCTGCTCTGCGCCTCCAG  2219

Query 2271  CCCAGCCAGCTGTTGCCATGTCATCTGATC  2300
            |||.||||||||.||||||||||||     
Sbjct 2220  CCCCGCCAGCTGCTGCCATGTCATC-----  2244

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