Nucleotide Global Alignment

Description

Query:
TRCN0000489052
Subject:
XR_002957195.1
Aligned Length:
3801
Identities:
958
Gaps:
2843

Alignment

Query    1  --------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG  42
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  GGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG  74

Query   43  CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC  116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC  148

Query  117  ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG  190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG  222

Query  191  GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA  264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA  296

Query  265  GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA  338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA  370

Query  339  CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA  412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA  444

Query  413  CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA  486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA  518

Query  487  AAATTAATCAACAGAGTGGGACCTAATGGTGAGAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTTGCT  560
            |||||||||||||||||||||||||||||||||                                         
Sbjct  519  AAATTAATCAACAGAGTGGGACCTAATGGTGAG-----------------------------------------  551

Query  561  ACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAGAAG  634
                                                                                      
Sbjct  552  --------------------------------------------------------------------------  551

Query  635  CTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGAC  708
                                           |||||||||||||||||||||||||||||||||||||||||||
Sbjct  552  -------------------------------AGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGAC  594

Query  709  TGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAGC  782
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  595  TGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAGC  668

Query  783  TGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGAG  856
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  669  TGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGAG  742

Query  857  CCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAG  930
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  743  CCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAG  816

Query  931  GATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGA  1004
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  817  GATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGA  890

Query 1005  AGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCATGCTGA  1078
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  891  AGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCATGCTGA  964

Query 1079  GGAAGCGTAACCCCCAGGGTTTAGAG------------------------------------------------  1104
            ||||||||||||||||||||||||||                                                
Sbjct  965  GGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGATGGGA  1038

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1039  CCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAACGAACATCAGCTTA  1112

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1113  CAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTCTTTGGGCCTTGAGC  1186

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1187  AGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGTTCAGGTAGGAAAT  1260

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1261  GCTCTTGGTCACATCAGAACTCTAGATCTGGGGGAATAAACAAACCCGAATTATTACCACACTCTCAAAGTTCT  1334

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1335  CTTCAATCTGGACTATTTGTATTCCAAAGAAAAATTTAGTGCTTTAGCTATTCAGCAATATTGAGAAAAAACAT  1408

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1409  GAACACATTTATGACTTTGCCTTGACCATTGACTTTTCTAAAATGTGCTTCCTTTTCCTTTATTTCCCTTTTTT  1482

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1483  TATACAAAGAAAATAGCCCAAATTTCTCCTCTTAGGTCATTCCTTAACCTCTCAGAGAACCAGTTTCCCCATGA  1556

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1557  ATTGGGAATAATGCTCTATTTACAGGGCTGTTTGGATTAAATAAGATGCTGTTTATAAAGTGTCTGTGCCAGGG  1630

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1631  CAAAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAGTGTTGCTGAGATG  1704

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1705  TCACACCTGACACCCTCTAAGGCTACCCTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCAGTCTCCGGGTGCC  1778

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1779  TTTAGTTATAACCTCTTGTCTGGGTCAGACCATTAGCTTTCATGTCTGCTTCTAGCTACAACTGTAGCCTCCCT  1852

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1853  TCCTTTTGCCTTCAAATCTGCCACAGCTGCCCGGCAACAAAAAAAGATTCCTAAGCATCTCGAGGTCCTGTTTA  1926

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1927  AATGGGTTAGGGTCCAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTTATACCTTTTTCATCTCTACAGCC  2000

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2001  CTGTTCTCTTCCTAAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGCGGCACAGCAGACC  2074

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2075  CTGAAGAGAACTGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGTTCTGATGA  2148

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2149  ACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTGAGGTTATGATCTC  2222

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2223  TTTGCTATTATCACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATAGAAAAAAATTAGG  2296

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2297  AAGTAAACAGGGCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCAAGTTTAATTTGTT  2370

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2371  GATATATGTGTGTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGAAAATACCAAGTTT  2444

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2445  GTCATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAAGTCAATAAAAGCA  2518

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2519  CAGTTTTGCAAATTTGTCTAAAACGCCAGATAATCTTGAACAAAAATAAAATGTCTGACCACTCCAAAATAGGA  2592

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2593  AAAGACAATCTTGTGCAAATAGACATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATA  2666

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2667  CTGCACCCTCCTGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTTGCGTTCTAGGAAACTCTGGAT  2740

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2741  CTCAGCCTCATCTCCAGCTTTGCCTGGACCTTGCTAGGGGGAGGGAGGGACAGGAGCACAGAGGAGGAGAGGAG  2814

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2815  AGGGATGTGATGTCTTTCTTAGGAAAGAAAAAAAGGCACAGTGATGAGCTATAAAGGTAGTGATGAGAGCTATA  2888

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2889  AAGGTAGTGATGAAAGCAAGGAATAATTTTCATTCACCCCAAATCCTACGGCAAGCTTTGACAATGTAACATCT  2962

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2963  TTATCTTGTGGTTAGGAAAATGGACCTAGAGAGATTATGTGGTTTGCTCAAAATCACATAGCTACTAAGTGCAG  3036

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3037  TAGTGCTTTCTATAAGACCAACTTGCCTTTCCACTTGGTTGGAAAATTTAAAAACCAAACCTGTCGTAATCTAT  3110

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3111  CTGTTCTGCCCCTCCCGCCTGTATCATGAGATGACTGAAAATTCCAGGTGGCCATAAACTCAAACAAGAGCCTA  3184

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3185  GCCCTTGGCTTATTACCGGTGGCTACTACAAACCTACAGACCAGAGCCCAGGGTAGTATAGAGTCCCAACTCTG  3258

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3259  GGCCCTGACTGCAGGTCATTCAGGTCCCAGTCACAGTGAAAGCAGACTCATTCAGCTATCTGGAGAAGTGTAAT  3332

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3333  CTGAGGGCCACTTGGCATCCTGAGTTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCC  3406

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3407  AGTGTTACTGCAGTAAGAGAAAACCAGGAAGTCCATCTAGGAGATGAAATTTGTGCTTGCATAACAGAGCCATG  3480

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3481  GAAATGGCTATCCCAGCATCTCCCCTCACTGCAGACTCCATTGTAAGCAAAGCATGGACCTTTTTCTTTGAAAC  3554

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3555  CAACCCTGTCACTTGTTAAATTTAGAATTACCTCTAAATGCTAAGTTTATTTAAGAGGTAAATGTCCTGCTATT  3628

Query 1105  ---------------------------  1104
                                       
Sbjct 3629  TTCAGAATGGAGAAAAAAAAAAAAAAA  3655

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