Nucleotide Global Alignment

Description

Query:
TRCN0000489052
Subject:
XR_428848.4
Aligned Length:
3888
Identities:
1104
Gaps:
2784

Alignment

Query    1  --------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG  42
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  GGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG  74

Query   43  CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC  116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC  148

Query  117  ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG  190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG  222

Query  191  GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA  264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA  296

Query  265  GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA  338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA  370

Query  339  CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA  412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA  444

Query  413  CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA  486
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA  518

Query  487  AAATTAATCAACAGAGTGGGACCTAATGGTGAG-----------------------------------------  519
            |||||||||||||||||||||||||||||||||                                         
Sbjct  519  AAATTAATCAACAGAGTGGGACCTAATGGTGAGAGTACCCAGACAGACCATAGTGATGTTTACGTCCATTGCCT  592

Query  520  ----------------------------------------------AGAGCACAGACTGTGACTTCTGACCAAG  547
                                                          ||||||||||||||||||||||||||||
Sbjct  593  AGGAGTATTTACCACTAAATGGTTGGATTGTCTGATATTTCTAAGCAGAGCACAGACTGTGACTTCTGACCAAG  666

Query  548  AGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCT  621
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCT  740

Query  622  CCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTA  695
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTA  814

Query  696  TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTG  769
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTG  888

Query  770  CTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCC  843
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCC  962

Query  844  ACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTT  917
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTT  1036

Query  918  TCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGG  991
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGG  1110

Query  992  AAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACA  1065
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACA  1184

Query 1066  GGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAG-----------------------------------  1104
            |||||||||||||||||||||||||||||||||||||||                                   
Sbjct 1185  GGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAG  1258

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1259  TCCCAAGATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAAC  1332

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1333  GAACATCAGCTTACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTCT  1406

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1407  TTGGGCCTTGAGCAGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGT  1480

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1481  TCAGGTAGGAAATGCTCTTGGTCACATCAGAACTCTAGATCTGGGGGAATAAACAAACCCGAATTATTACCACA  1554

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1555  CTCTCAAAGTTCTCTTCAATCTGGACTATTTGTATTCCAAAGAAAAATTTAGTGCTTTAGCTATTCAGCAATAT  1628

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1629  TGAGAAAAAACATGAACACATTTATGACTTTGCCTTGACCATTGACTTTTCTAAAATGTGCTTCCTTTTCCTTT  1702

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1703  ATTTCCCTTTTTTTATACAAAGAAAATAGCCCAAATTTCTCCTCTTAGGTCATTCCTTAACCTCTCAGAGAACC  1776

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1777  AGTTTCCCCATGAATTGGGAATAATGCTCTATTTACAGGGCTGTTTGGATTAAATAAGATGCTGTTTATAAAGT  1850

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1851  GTCTGTGCCAGGGCAAAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAG  1924

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1925  TGTTGCTGAGATGTCACACCTGACACCCTCTAAGGCTACCCTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCA  1998

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 1999  GTCTCCGGGTGCCTTTAGTTATAACCTCTTGTCTGGGTCAGACCATTAGCTTTCATGTCTGCTTCTAGCTACAA  2072

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2073  CTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCGGCAACAAAAAAAGATTCCTAAGCATCTC  2146

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2147  GAGGTCCTGTTTAAATGGGTTAGGGTCCAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTTATACCTTTTT  2220

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2221  CATCTCTACAGCCCTGTTCTCTTCCTAAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGC  2294

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2295  GGCACAGCAGACCCTGAAGAGAACTGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGT  2368

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2369  GTGGTTCTGATGAACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTG  2442

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2443  AGGTTATGATCTCTTTGCTATTATCACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATA  2516

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2517  GAAAAAAATTAGGAAGTAAACAGGGCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCA  2590

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2591  AGTTTAATTTGTTGATATATGTGTGTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGA  2664

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2665  AAATACCAAGTTTGTCATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAA  2738

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2739  GTCAATAAAAGCACAGTTTTGCAAATTTGTCTAAAACGCCAGATAATCTTGAACAAAAATAAAATGTCTGACCA  2812

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2813  CTCCAAAATAGGAAAAGACAATCTTGTGCAAATAGACATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTC  2886

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2887  CCAGCAAGAGATACTGCACCCTCCTGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTTGCGTTCTA  2960

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 2961  GGAAACTCTGGATCTCAGCCTCATCTCCAGCTTTGCCTGGACCTTGCTAGGGGGAGGGAGGGACAGGAGCACAG  3034

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3035  AGGAGGAGAGGAGAGGGATGTGATGTCTTTCTTAGGAAAGAAAAAAAGGCACAGTGATGAGCTATAAAGGTAGT  3108

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3109  GATGAGAGCTATAAAGGTAGTGATGAAAGCAAGGAATAATTTTCATTCACCCCAAATCCTACGGCAAGCTTTGA  3182

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3183  CAATGTAACATCTTTATCTTGTGGTTAGGAAAATGGACCTAGAGAGATTATGTGGTTTGCTCAAAATCACATAG  3256

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3257  CTACTAAGTGCAGTAGTGCTTTCTATAAGACCAACTTGCCTTTCCACTTGGTTGGAAAATTTAAAAACCAAACC  3330

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3331  TGTCGTAATCTATCTGTTCTGCCCCTCCCGCCTGTATCATGAGATGACTGAAAATTCCAGGTGGCCATAAACTC  3404

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3405  AAACAAGAGCCTAGCCCTTGGCTTATTACCGGTGGCTACTACAAACCTACAGACCAGAGCCCAGGGTAGTATAG  3478

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3479  AGTCCCAACTCTGGGCCCTGACTGCAGGTCATTCAGGTCCCAGTCACAGTGAAAGCAGACTCATTCAGCTATCT  3552

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3553  GGAGAAGTGTAATCTGAGGGCCACTTGGCATCCTGAGTTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAG  3626

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3627  AGAAGGGAAGGCCAGTGTTACTGCAGTAAGAGAAAACCAGGAAGTCCATCTAGGAGATGAAATTTGTGCTTGCA  3700

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3701  TAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCTCACTGCAGACTCCATTGTAAGCAAAGCATGGACCT  3774

Query 1105  --------------------------------------------------------------------------  1104
                                                                                      
Sbjct 3775  TTTTCTTTGAAACCAACCCTGTCACTTGTTAAATTTAGAATTACCTCTAAATGCTAAGTTTATTTAAGAGGTAA  3848

Query 1105  ----------------------------------------  1104
                                                    
Sbjct 3849  ATGTCCTGCTATTTTCAGAATGGAGAAAAAAAAAAAAAAA  3888

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