Nucleotide Global Alignment
Description
- Query:
- TRCN0000489052
- Subject:
- XR_428848.4
- Aligned Length:
- 3888
- Identities:
- 1104
- Gaps:
- 2784
Alignment
Query 1 --------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 74
Query 43 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 148
Query 117 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG 222
Query 191 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 296
Query 265 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA 370
Query 339 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 444
Query 413 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 518
Query 487 AAATTAATCAACAGAGTGGGACCTAATGGTGAG----------------------------------------- 519
|||||||||||||||||||||||||||||||||
Sbjct 519 AAATTAATCAACAGAGTGGGACCTAATGGTGAGAGTACCCAGACAGACCATAGTGATGTTTACGTCCATTGCCT 592
Query 520 ----------------------------------------------AGAGCACAGACTGTGACTTCTGACCAAG 547
||||||||||||||||||||||||||||
Sbjct 593 AGGAGTATTTACCACTAAATGGTTGGATTGTCTGATATTTCTAAGCAGAGCACAGACTGTGACTTCTGACCAAG 666
Query 548 AGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCT 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCT 740
Query 622 CCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTA 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTA 814
Query 696 TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTG 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTG 888
Query 770 CTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCC 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCC 962
Query 844 ACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTT 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTT 1036
Query 918 TCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGG 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGG 1110
Query 992 AAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACA 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACA 1184
Query 1066 GGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAG----------------------------------- 1104
|||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAG 1258
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1259 TCCCAAGATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAAC 1332
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1333 GAACATCAGCTTACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTCT 1406
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1407 TTGGGCCTTGAGCAGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGT 1480
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1481 TCAGGTAGGAAATGCTCTTGGTCACATCAGAACTCTAGATCTGGGGGAATAAACAAACCCGAATTATTACCACA 1554
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1555 CTCTCAAAGTTCTCTTCAATCTGGACTATTTGTATTCCAAAGAAAAATTTAGTGCTTTAGCTATTCAGCAATAT 1628
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1629 TGAGAAAAAACATGAACACATTTATGACTTTGCCTTGACCATTGACTTTTCTAAAATGTGCTTCCTTTTCCTTT 1702
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1703 ATTTCCCTTTTTTTATACAAAGAAAATAGCCCAAATTTCTCCTCTTAGGTCATTCCTTAACCTCTCAGAGAACC 1776
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1777 AGTTTCCCCATGAATTGGGAATAATGCTCTATTTACAGGGCTGTTTGGATTAAATAAGATGCTGTTTATAAAGT 1850
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1851 GTCTGTGCCAGGGCAAAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAG 1924
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1925 TGTTGCTGAGATGTCACACCTGACACCCTCTAAGGCTACCCTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCA 1998
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1999 GTCTCCGGGTGCCTTTAGTTATAACCTCTTGTCTGGGTCAGACCATTAGCTTTCATGTCTGCTTCTAGCTACAA 2072
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2073 CTGTAGCCTCCCTTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCGGCAACAAAAAAAGATTCCTAAGCATCTC 2146
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2147 GAGGTCCTGTTTAAATGGGTTAGGGTCCAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTTATACCTTTTT 2220
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2221 CATCTCTACAGCCCTGTTCTCTTCCTAAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGC 2294
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2295 GGCACAGCAGACCCTGAAGAGAACTGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGT 2368
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2369 GTGGTTCTGATGAACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTG 2442
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2443 AGGTTATGATCTCTTTGCTATTATCACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATA 2516
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2517 GAAAAAAATTAGGAAGTAAACAGGGCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCA 2590
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2591 AGTTTAATTTGTTGATATATGTGTGTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGA 2664
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2665 AAATACCAAGTTTGTCATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAA 2738
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2739 GTCAATAAAAGCACAGTTTTGCAAATTTGTCTAAAACGCCAGATAATCTTGAACAAAAATAAAATGTCTGACCA 2812
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2813 CTCCAAAATAGGAAAAGACAATCTTGTGCAAATAGACATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTC 2886
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2887 CCAGCAAGAGATACTGCACCCTCCTGACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTTGCGTTCTA 2960
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2961 GGAAACTCTGGATCTCAGCCTCATCTCCAGCTTTGCCTGGACCTTGCTAGGGGGAGGGAGGGACAGGAGCACAG 3034
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3035 AGGAGGAGAGGAGAGGGATGTGATGTCTTTCTTAGGAAAGAAAAAAAGGCACAGTGATGAGCTATAAAGGTAGT 3108
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3109 GATGAGAGCTATAAAGGTAGTGATGAAAGCAAGGAATAATTTTCATTCACCCCAAATCCTACGGCAAGCTTTGA 3182
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3183 CAATGTAACATCTTTATCTTGTGGTTAGGAAAATGGACCTAGAGAGATTATGTGGTTTGCTCAAAATCACATAG 3256
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3257 CTACTAAGTGCAGTAGTGCTTTCTATAAGACCAACTTGCCTTTCCACTTGGTTGGAAAATTTAAAAACCAAACC 3330
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3331 TGTCGTAATCTATCTGTTCTGCCCCTCCCGCCTGTATCATGAGATGACTGAAAATTCCAGGTGGCCATAAACTC 3404
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3405 AAACAAGAGCCTAGCCCTTGGCTTATTACCGGTGGCTACTACAAACCTACAGACCAGAGCCCAGGGTAGTATAG 3478
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3479 AGTCCCAACTCTGGGCCCTGACTGCAGGTCATTCAGGTCCCAGTCACAGTGAAAGCAGACTCATTCAGCTATCT 3552
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3553 GGAGAAGTGTAATCTGAGGGCCACTTGGCATCCTGAGTTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAG 3626
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3627 AGAAGGGAAGGCCAGTGTTACTGCAGTAAGAGAAAACCAGGAAGTCCATCTAGGAGATGAAATTTGTGCTTGCA 3700
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3701 TAACAGAGCCATGGAAATGGCTATCCCAGCATCTCCCCTCACTGCAGACTCCATTGTAAGCAAAGCATGGACCT 3774
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3775 TTTTCTTTGAAACCAACCCTGTCACTTGTTAAATTTAGAATTACCTCTAAATGCTAAGTTTATTTAAGAGGTAA 3848
Query 1105 ---------------------------------------- 1104
Sbjct 3849 ATGTCCTGCTATTTTCAGAATGGAGAAAAAAAAAAAAAAA 3888
