Nucleotide Global Alignment

Description

• Query: TRCN0000489078
• Subject: NM_001301853.1
• Aligned Length: 1321
• Identities: 1045
• Gaps: 107

Alignment

Query    1  ATGGAGGTGGTGGACCCGCAGCAGCTGGGCATGTTCACGGAGGGCGAGCTGATGTCGGTGGGTATGGACACGTT  74
            |||||.||||.||||||..|||.|.|||||.|.|||.|.|||||||||||||||||||||||.||||||||.||
Sbjct    1  ATGGACGTGGCGGACCCCGAGCCGTTGGGCCTTTTCTCCGAGGGCGAGCTGATGTCGGTGGGCATGGACACCTT  74

Query   75  CATCCACCGCATCGACTCCACCGAGGTCATCTACCAGCCGCGCCGCAAGCGGGCCAAGCTCATCGGCAAGTACC  148
            |||||||||||||||||||||||||||.||||||||||||||||||||.||.||||||||||||||||||||||
Sbjct   75  CATCCACCGCATCGACTCCACCGAGGTAATCTACCAGCCGCGCCGCAAACGCGCCAAGCTCATCGGCAAGTACC  148

Query  149  TGATGGGGGACCTGCTGGGGGAAGGCTCTTACGGCAAGGTGAAGGAGGTGCTGGACTCGGAGACGCTGTGCAGG  222
            ||||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||||.|||||..|.|||.|.
Sbjct  149  TGATGGGGGACCTGCTCGGGGAGGGCTCGTACGGCAAGGTGAAGGAGGTGCTGGACTCCGAGACCTTATGCCGC  222

Query  223  AGGGCCGTCAAGATCCTCAAGAAGAAGAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACGTGAAGAAGGAAAT  296
            |||||.||||||||||||||||||||.|||.||||.|||||||||||.||.|||||||||||.||||||||.||
Sbjct  223  AGGGCGGTCAAGATCCTCAAGAAGAAAAAGCTGCGCAGGATCCCCAATGGAGAGGCCAACGTCAAGAAGGAGAT  296

Query  297  TCAACTACTGAGGAGGTTACGGCACAAAAATGTCATCCAGCTGGTGGATGTGTTATACAACGAAGAGAAGCAGA  370
            .||.||.|||.||.||.|.|||||....|||||.||||||||.|||||.|||.|.|||||.||.||||||||||
Sbjct  297  CCAGCTGCTGCGGCGGCTGCGGCATCGGAATGTGATCCAGCTTGTGGACGTGCTGTACAATGAGGAGAAGCAGA  370

Query  371  AAATGTATATGGTGATGGAGTACTGCGTGTGTGGCATGCAGGAAATGCTGGACAGCGTGCCGGAGAAGCGTTTC  444
            |.||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||||||||||||||.|||
Sbjct  371  AGATGTATATGGTGATGGAGTACTGCGTATGTGGCATGCAGGAGATGCTGGACAGTGTGCCGGAGAAGCGCTTC  444

Query  445  CCAGTGTGCCAGGCCCACGGGTACTTCTGTCAGCTGATTGACGGCCTGGAGTACCTGCATAGCCAGGGCATTGT  518
            ||.||||||||.||.||.|||||||||.|.||||||||||||||||||||.|||||.||.||||||||||||||
Sbjct  445  CCTGTGTGCCAAGCTCATGGGTACTTCCGCCAGCTGATTGACGGCCTGGAATACCTACACAGCCAGGGCATTGT  518

Query  519  GCACAAGGACATCAAGCCGGGGAACCTGCTGCTCACCACCGGTGGCACCCTCAAAATCTCCGACCTGGGCGTGG  592
            .||||||||||||||||||||.||||||||.|||||||||..||||||.|||||.|||||||||||.||.||.|
Sbjct  519  TCACAAGGACATCAAGCCGGGCAACCTGCTACTCACCACCAATGGCACACTCAAGATCTCCGACCTCGGTGTTG  592

Query  593  CCGAGGCACTGCACCCGTTCGCGGCGGACGACACCTGCCGGACCAGCCAGGGCTCCCCGGCTTTCCAGCCGCCC  666
            |||||||.||||||||.|||||.|.|||.||||||||||||||.|||||||||||||||||.||||||||.||.
Sbjct  593  CCGAGGCCCTGCACCCTTTCGCTGTGGATGACACCTGCCGGACAAGCCAGGGCTCCCCGGCCTTCCAGCCTCCT  666

Query  667  GAGATTGCCAACGGCCTGGACACCTTCTCCGGCTTCAAGGTGGACATCTGGTCGGCTGGGGTCACCCTCTACAA  740
            |||||||||||.||.|||||||||||.||.||.||||||||||||||||||||.|||||||||||.||.|||||
Sbjct  667  GAGATTGCCAATGGACTGGACACCTTTTCAGGTTTCAAGGTGGACATCTGGTCAGCTGGGGTCACACTTTACAA  740

Query  741  CATCACCACGGGTCTGTACCCCTTCGAAGGGGACAACATCTACAAGTTGTTTGAGAACATCGGGAAGGGGAG-C  813
            ||||||||||||.||||||||.||.||.||||||||.|||||||||.|.|||||||||||.||| ||.|||| |
Sbjct  741  CATCACCACGGGCCTGTACCCATTTGAGGGGGACAATATCTACAAGCTCTTTGAGAACATTGGG-AGAGGAGAC  813

Query  814  TACGCCATCCCGGGCGACTGTGGCCCCCCGCTCTCTGACCTGCTGAAAGGGATGCTTGAGTACGAACCGGCCAA  887
            |.|.|||||||..|.|||||.|||||.||.|||||||||||.||...|||||||.|.|||||.||.||||||||
Sbjct  814  TTCACCATCCCTTGTGACTGCGGCCCACCACTCTCTGACCTACTCCGAGGGATGTTGGAGTATGAGCCGGCCAA  887

Query  888  GAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCTGGTTCCGGAAGAAACATCCTCCGGCTGAAGCACCAGTGC  961
            |||||||||||||||.|||||..||||||||||||||||||||||||||||.||||.||||||.||.|..||.|
Sbjct  888  GAGGTTCTCCATCCGACAGATTAGGCAGCACAGCTGGTTCCGGAAGAAACACCCTCTGGCTGAGGCGCTCGTAC  961

Query  962  CCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGTACTTGGAGGACCTGCAC  1035
            |.||||||||.|||||||||||.||||||||.||||||||.||||||||.|||||.|||.|||||||||||||.
Sbjct  962  CTATCCCACCAAGCCCAGACACTAAGGACCGCTGGCGCAGTATGACTGTAGTGCCCTACCTGGAGGACCTGCAT  1035

Query 1036  GGC---GCGGACGAGGACGAG------GACCTCTTCGACATCGAGGATGACATCATCTACACTCAGGACTTCAC  1100
            |||   |||||.|||||.|||      |||.|.||.|||||.|||||.|.|||.||||||||.|||||||||||
Sbjct 1036  GGCCGTGCGGAGGAGGAGGAGGAGGAAGACTTGTTTGACATTGAGGACGGCATTATCTACACCCAGGACTTCAC  1109

Query 1101  GGTGCCCGGACAGGTCCCAGAAGAGGAGGCCAGTCACAATGGACAGCGCCGGGGCCTCCCCAAGGC----CGTG  1170
            .|||||.||   .|||      ||||||||                .||||.||      ||.|||    ||.|
Sbjct 1110  AGTGCCTGG---TGTC------GAGGAGGC----------------GGCCGAGG------CAGGGCTTAGCGAG  1152

Query 1171  --TGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCCCCCAACCCTGCC  1242
              ||.|||  ||.||||       .|||  ||.|.|  |.|.||||||||.|||              |||.||
Sbjct 1153  GATGCATG--CGACACA-------TGCA--TGTGGA--AGAGCCAGGGCGCAGG--------------CCTTCC  1199

Query 1243  CGCA-AGGCCTGCTCCGCCAGCAGCAAGATCCGCCGGCTGTCGGCC-----TGCAAGCAGCAG  1299
            .|.| |||  .|| |||  ||.||           ||.|.|.||.|     ||          
Sbjct 1200  TGGAGAGG--AGC-CCG--AGGAG-----------GGGTTTGGGGCTTTAGTG----------  1236