Nucleotide Global Alignment
Description
- Query:
- TRCN0000489078
- Subject:
- NM_001301854.1
- Aligned Length:
- 1318
- Identities:
- 790
- Gaps:
- 401
Alignment
Query 1 ATGGAGGTGGTGGACCCGCAGCAGCTGGGCATGTTCACGGAGGGCGAGCTGATGTCGGTGGGTATGGACACGTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATCCACCGCATCGACTCCACCGAGGTCATCTACCAGCCGCGCCGCAAGCGGGCCAAGCTCATCGGCAAGTACC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGATGGGGGACCTGCTGGGGGAAGGCTCTTACGGCAAGGTGAAGGAGGTGCTGGACTCGGAGACGCTGTGCAGG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AGGGCCGTCAAGATCCTCAAGAAGAAGAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACGTGAAGAAGGAAAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TCAACTACTGAGGAGGTTACGGCACAAAAATGTCATCCAGCTGGTGGATGTGTTATACAACGAAGAGAAGCAGA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAATGTATATGGTGATGGAGTACTGCGTGTGTGGCATGCAGGAAATGCTGGACAGCGTGCCGGAGAAGCGTTTC 444
||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||||||||||||||.|||
Sbjct 1 --ATGTATATGGTGATGGAGTACTGCGTATGTGGCATGCAGGAGATGCTGGACAGTGTGCCGGAGAAGCGCTTC 72
Query 445 CCAGTGTGCCAGGCCCACGGGTACTTCTGTCAGCTGATTGACGGCCTGGAGTACCTGCATAGCCAGGGCATTGT 518
||.||||||||.||.||.|||||||||.|.||||||||||||||||||||.|||||.||.||||||||||||||
Sbjct 73 CCTGTGTGCCAAGCTCATGGGTACTTCCGCCAGCTGATTGACGGCCTGGAATACCTACACAGCCAGGGCATTGT 146
Query 519 GCACAAGGACATCAAGCCGGGGAACCTGCTGCTCACCACCGGTGGCACCCTCAAAATCTCCGACCTGGGCGTGG 592
.||||||||||||||||||||.||||||||.|||||||||..||||||.|||||.|||||||||||.||.||.|
Sbjct 147 TCACAAGGACATCAAGCCGGGCAACCTGCTACTCACCACCAATGGCACACTCAAGATCTCCGACCTCGGTGTTG 220
Query 593 CCGAGGCACTGCACCCGTTCGCGGCGGACGACACCTGCCGGACCAGCCAGGGCTCCCCGGCTTTCCAGCCGCCC 666
|||||||.||||||||.|||||.|.|||.||||||||||||||.|||||||||||||||||.||||||||.||.
Sbjct 221 CCGAGGCCCTGCACCCTTTCGCTGTGGATGACACCTGCCGGACAAGCCAGGGCTCCCCGGCCTTCCAGCCTCCT 294
Query 667 GAGATTGCCAACGGCCTGGACACCTTCTCCGGCTTCAAGGTGGACATCTGGTCGGCTGGGGTCACCCTCTACAA 740
|||||||||||.||.|||||||||||.||.||.||||||||||||||||||||.|||||||||||.||.|||||
Sbjct 295 GAGATTGCCAATGGACTGGACACCTTTTCAGGTTTCAAGGTGGACATCTGGTCAGCTGGGGTCACACTTTACAA 368
Query 741 CATCACCACGGGTCTGTACCCCTTCGAAGGGGACAACATCTACAAGTTGTTTGAGAACATCGGGAAGGGGAG-C 813
||||||||||||.||||||||.||.||.||||||||.|||||||||.|.|||||||||||.||| ||.|||| |
Sbjct 369 CATCACCACGGGCCTGTACCCATTTGAGGGGGACAATATCTACAAGCTCTTTGAGAACATTGGG-AGAGGAGAC 441
Query 814 TACGCCATCCCGGGCGACTGTGGCCCCCCGCTCTCTGACCTGCTGAAAGGGATGCTTGAGTACGAACCGGCCAA 887
|.|.|||||||..|.|||||.|||||.||.|||||||||||.||...|||||||.|.|||||.||.||||||||
Sbjct 442 TTCACCATCCCTTGTGACTGCGGCCCACCACTCTCTGACCTACTCCGAGGGATGTTGGAGTATGAGCCGGCCAA 515
Query 888 GAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCTGGTTCCGGAAGAAACATCCTCCGGCTGAAGCACCAGTGC 961
|||||||||||||||.|||||..||||||||||||||||||||||||||||.||||.||||||.||.|..||.|
Sbjct 516 GAGGTTCTCCATCCGACAGATTAGGCAGCACAGCTGGTTCCGGAAGAAACACCCTCTGGCTGAGGCGCTCGTAC 589
Query 962 CCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGTACTTGGAGGACCTGCAC 1035
|.||||||||.|||||||||||.||||||||.||||||||.||||||||.|||||.|||.|||||||||||||.
Sbjct 590 CTATCCCACCAAGCCCAGACACTAAGGACCGCTGGCGCAGTATGACTGTAGTGCCCTACCTGGAGGACCTGCAT 663
Query 1036 GGC---GCGGACGAGGACGAG------GACCTCTTCGACATCGAGGATGACATCATCTACACTCAGGACTTCAC 1100
||| |||||.|||||.||| |||.|.||.|||||.|||||.|.|||.||||||||.|||||||||||
Sbjct 664 GGCCGTGCGGAGGAGGAGGAGGAGGAAGACTTGTTTGACATTGAGGACGGCATTATCTACACCCAGGACTTCAC 737
Query 1101 GGTGCCCGGACAGGTCCCAGAAGAGGAGGCCAGTCACAATGGACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTA 1174
.|||||.||||||||||..||||||||.|...||||.|||||||||.|||...|..|.||||||||.||.|||.
Sbjct 738 AGTGCCTGGACAGGTCCTGGAAGAGGAAGTGGGTCAGAATGGACAGAGCCACAGTTTGCCCAAGGCTGTTTGTG 811
Query 1175 TGAACGGCACAGAGGCGGCGCAGCTGAGCACCA-----AATCCAG--GGCGGAGGGCCGGG--CCCCCAACCCT 1239
||||.|||||||| |.|.|||||.||||.|| ||.|||| |||.|| ||.|| ||.||||||||
Sbjct 812 TGAATGGCACAGA---GCCCCAGCTCAGCAGCAAGGTGAAGCCAGAAGGCCGA---CCTGGCACCGCCAACCCT 879
Query 1240 GCCCGCAAGGCCTGCTCCGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAG 1299
||.|||||||..|||| ||||||.|||||||||||||||.||||||||||||||||||
Sbjct 880 GCGCGCAAGGTGTGCT---CCAGCAACAAGATCCGCCGGCTCTCGGCCTGCAAGCAGCAG 936