Nucleotide Global Alignment
Description
- Query:
- TRCN0000489110
- Subject:
- XR_001779869.1
- Aligned Length:
- 3323
- Identities:
- 1130
- Gaps:
- 2082
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGATTCCCAGCTGCGTCCACAGCGTTGCGGCGCAATGCGCGCCCTGCTTTCCCCTCCTTACAGACTAGGTGCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTCCGCTGTCACCACTTATCTTGGGGCCTGGACCAAAAAGACAGACGTTCAGTTCCAAAAACGAATGAATGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAGTGAACGAACGAACGAAGGATTCAAAAAGGAAGGGTTCCCGCCGCAGAGCATCAGTGTCCCAGCACATCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGTGTGTTTAGGCCAAAGGCGCGCGGATCGGGAGGGGGATTCGGGCCCGGCCTCCCCTCCCCACTAAATTGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCGGAGGTGAACCTCCTGGATGGCTGCAGGGCGGGAACCACCCAAATGTAGTTCTCAGCTTCTTTTTCCACGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGCTGAGTTTTGTGGAAATCGCCCTATTCCCCAGCGCCTACTAGCCTTCTAAATCCCGCCCCCCGAGCCCCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGTACCCCGGGATCCCCCGGACTCTTTTGGTCCGGACATCCAGCCTCACAGGAGGCTAGAGAAGAAAGGCTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGCTCTCCAGCAGCCGCCTCCCGGATCCCCGGTTTTTCCCTAGCTGCGGTGGCAGCCGCCGCCGCCTGTGCGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCGCGCACTGCCGCAAGCCGGGGTGCGGGGAGAGGGGGTTCAGCACGGCCAGGGTGCGGGGATCCGGGCCGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTGGGCAGTGGACCGAGGAGACCGGAGCCTGCAGCCAGCGGAGGGGCGAGGAGCGGAGGAGGGACAGGAGGGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGCGGAGGGAGAAAGAGGAGGGGACACGAGGCGAGGGGGCGGGGAGCAGAGGCGAGAGGCAGGCGGACCGTGGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGAGGCGACCGGGCTAGGCGGGATCCAGGCAGGAGAGAGGTAGCTGTGGGCCCAGCTGAGTGGGGAGAAGGCGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCAGACTTGCTCGCGCAGGGCGAGCCAGAGCCTGCCGGTGGGGCGGGGCGGGAGGGTGCGAAGCCGGGCGCCTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAGCAGCTCAGCGACCCGGGAGACTGGCCGCCCAACGGAGACCGCAGCCGCCCGCTCTTCGCTCTGGGATGTC 1036
Query 1 --------------------------------------------ATGGGAGGGCACCCGCAGCTCCGTCTCGTC 30
||||||..||.||||||||||||.|||||.
Sbjct 1037 GGAGCGATCCTGGCATCCAGGACGCTGACAGAGCGAGCCCGAGGATGGGACAGCGCCCGCAGCTCCGGCTCGTG 1110
Query 31 AAGGCCCTTCTCCTTCTGGGGCTGAACCCCGTCTCTGCCTCCCTCCAGGACCAGCACTGCGAGAGCCTGTCCCT 104
|||||||||||||||||||||||||||||||||||..|||||||||||||.|||||.||.||||||||||||||
Sbjct 1111 AAGGCCCTTCTCCTTCTGGGGCTGAACCCCGTCTCCACCTCCCTCCAGGATCAGCAGTGTGAGAGCCTGTCCCT 1184
Query 105 GGCCAGCAACATCTCAGGACTGCAGTGCAACGCATCCGTGGACCTCATTGGCACCTGCTGGCCCCGCAGCCCTG 178
|||||||||..||||.||.|||||||||||.||.||||||||||||||||||||||||||||||.|.|||||||
Sbjct 1185 GGCCAGCAATGTCTCTGGCCTGCAGTGCAATGCCTCCGTGGACCTCATTGGCACCTGCTGGCCCAGGAGCCCTG 1258
Query 179 CGGGGCAGCTAGTGGTTCGGCCCTGCCCTGCCTTTTTCTATGGTGTCCGCTACAATACCACAAACAATGGCTAC 252
|.||||||.|.|||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||
Sbjct 1259 CAGGGCAGTTGGTGGTTCGGCCCTGCCCTGCCTTTTTCTACGGTGTCCGCTACAACACCACAAACAATGGCTAC 1332
Query 253 CGGGAGTGCCTGGCCAATGGCAGCTGGGCCGCCCGCGTGAATTACTCCGAGTGCCAGGAGATCCTCAATGAGGA 326
|||||.|||||||||||.|||||||||||.|||||.||||||||.||.||||||||||||||.|||||.||.||
Sbjct 1333 CGGGAATGCCTGGCCAACGGCAGCTGGGCAGCCCGTGTGAATTATTCTGAGTGCCAGGAGATTCTCAACGAAGA 1406
Query 327 GAAAAAAAGCAAGGTGCACTACCATGTCGCAGTCATCATCAACTACCTGGGCCACTGTATCTCCCTGGTGGCCC 400
|||.||.|||||.|||||||||||..|.||.||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1407 GAAGAAGAGCAAAGTGCACTACCACATTGCCGTCATCATCAACTACCTGGGCCACTGCATCTCCCTGGTGGCCC 1480
Query 401 TCCTGGTGGCCTTTGTCCTCTTTCTGCGGCTCAGGAGCATCCGGTGCCTGCGAAACATCATCCACTGGAACCTC 474
||||||||||||||||||||||.|||||||||||||||||||||||||||.|.|||||||||||||||||||||
Sbjct 1481 TCCTGGTGGCCTTTGTCCTCTTCCTGCGGCTCAGGAGCATCCGGTGCCTGAGGAACATCATCCACTGGAACCTC 1554
Query 475 ATCTCCGCCTTCATCCTGCGCAACGCCACCTGGTTCGTGGTCCAGCTAACCATGAGCCCCGAGGTCCACCAGAG 548
|||||.||.||||||||||||||||||||.|||||.|||||||||||.|||.||||||||||||||||||||||
Sbjct 1555 ATCTCGGCTTTCATCCTGCGCAACGCCACGTGGTTTGTGGTCCAGCTCACCGTGAGCCCCGAGGTCCACCAGAG 1628
Query 549 CAACGTGGGCTGGTGCAGGTTGGTGACAGCCGCCTACAACTACTTCCATGTGACCAACTTCTTCTGGATGTTCG 622
||||||||.||||||||||.||||||||||||||||||||||||||||.||.||||||||||||||||||||||
Sbjct 1629 CAACGTGGCCTGGTGCAGGCTGGTGACAGCCGCCTACAACTACTTCCACGTAACCAACTTCTTCTGGATGTTCG 1702
Query 623 GCGAGGGCTGCTACCTGCACACAGCCATCGTGCTCACCTACTCCACTGACCGGCTGCGCAAATGGATGTTCATC 696
|.|||||||||||||||||||||||||||||.|||||.||||||||.|||||.||||||||.|||||||||.||
Sbjct 1703 GTGAGGGCTGCTACCTGCACACAGCCATCGTACTCACGTACTCCACCGACCGTCTGCGCAAGTGGATGTTCGTC 1776
Query 697 TGCATTGGCTGGGGTGTGCCCTTCCCCATCATTGTGGCCTGGGCCATTGGGAAGCTGTACTACGACAATGAGAA 770
|||||.||||||||||||||.|||||||||||||||||.||||||||||||||.||.||||||||||||||.||
Sbjct 1777 TGCATCGGCTGGGGTGTGCCTTTCCCCATCATTGTGGCTTGGGCCATTGGGAAACTTTACTACGACAATGAAAA 1850
Query 771 GTGCTGGTTTGGCAAAAGGCCTGGGGTGTACACCGACTACATCTACCAGGGCCCCATGATCCTGGTCCTGCTGA 844
||||||||||||||||.|.|||||.||.||.||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GTGCTGGTTTGGCAAACGTCCTGGAGTATATACTGACTACATCTACCAGGGCCCCATGATCCTGGTCCTGCTGA 1924
Query 845 TCAATTTCATCTTCCTTTTCAACATCGTCCGCATCCTCATGACCAAGCTCCGGGCATCCACCACGTCTGAGACC 918
||||.||.|||||.||.||||||||.||||||||||||||||||||.|||||.|||||||||||.||||||||.
Sbjct 1925 TCAACTTTATCTTTCTCTTCAACATTGTCCGCATCCTCATGACCAAACTCCGAGCATCCACCACATCTGAGACT 1998
Query 919 ATTCAGTACAGGAAGGCTGTGAAAGCCACTCTGGTGCTGCTGCCCCTCCTGGGCATCACCTACATGCTGTTCTT 992
||||||||| ||||||||||.||||||||||||||..||||||||||||||||||||||||||.|||||||
Sbjct 1999 ATTCAGTAC----AGGCTGTGAAGGCCACTCTGGTGCTCTTGCCCCTCCTGGGCATCACCTACATGTTGTTCTT 2068
Query 993 CGTCAATCCCGGGGAGGATGAGGTCTCCCGGGTCGTCTTCATCTACTTCAACTCCTTCCTGGAATCCTTCCAGG 1066
||||||.||.||||||||.|||||||||.||||.||||||||||||||||||||.||||||||.|||||.||||
Sbjct 2069 CGTCAACCCTGGGGAGGACGAGGTCTCCAGGGTTGTCTTCATCTACTTCAACTCTTTCCTGGAGTCCTTTCAGG 2142
Query 1067 GCTTCTTTGTGTCTGTGTTCTACTGTTTCCTCAATAGTGAGGTCCGTTCTGCCATCCGGAAGAGGTGGCACCGG 1140
|||||||.||||||||||||||.|||||.||.||.|||||||||||.||||||||||||||||||||||..||.
Sbjct 2143 GCTTCTTCGTGTCTGTGTTCTATTGTTTTCTGAACAGTGAGGTCCGCTCTGCCATCCGGAAGAGGTGGCGGCGA 2216
Query 1141 TGGCAGGACAAGCACTCGATCCGTGCCCGAGTGGCCCGTGCCATGTCCATCCCCACCTCCCCAACCCGTGTCAG 1214
|||||||||||||||||.|||.|.||||||||||||||.|||||||||||||||||||||||.|||.|.|||||
Sbjct 2217 TGGCAGGACAAGCACTCCATCAGAGCCCGAGTGGCCCGCGCCATGTCCATCCCCACCTCCCCCACCAGAGTCAG 2290
Query 1215 CTTTCACAGCATCAAGCAGTCCACAGCAGTC------------------------------------------- 1245
|||.||||||||||||||||||||||||||.
Sbjct 2291 CTTCCACAGCATCAAGCAGTCCACAGCAGTGTGAACCTCAGGCCACAGAGCAGCCCCCAAGACCCGAGGCTGGG 2364
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2365 GAAATGATGCAAGCTCACTAGCGAGCCTGTCTGCAGAGGCAGGCAGCCTTCCCATCCCTGCCCCTGGGATGCAG 2438
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2439 ACCTGTAAGCCTGCCCAGCCGTGGACAAAGCCCATAGCACTGGGGTGGGCCCTTGGCATCTAGCTCCCTGCTGC 2512
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2513 CCATTCTCCCTGGGAAGTTGAAATGGGCATTGGGGGCTGGAAACCCTGCAGCAGTTTGATGGGCCTGTGAGCGC 2586
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2587 TGTCTTCTCCCAGAGCAGCTTACTGAAGATCTGTCGTCTTCAGGAGCTGTTGGGGAGGCCAACTGTTACCCTGG 2660
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2661 GGCATCATGGAAAACTCCCTTCTGAGACTGTAAAGTCTCTGAGTGTTAGCGATGCCTTGGGATGCTACCGAGGA 2734
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2735 CCAACATGGTCCAGTCAGGAGACCGGGAGATAGCGGTAGAAATCTGGGAACGTCATCAGATGGCACTCCACCTC 2808
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2809 CCTACAAGTCACTCCTGAGCCACCAGGATTTCATCAGCACTGTGGCACTGCCACTGGAAAGCCCTGCCTTGCTG 2882
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2883 CTTTGCTGCCCTGCACCTTTAGACATTTACTATTCTGCAGGCCAAGCCAGCTTTCTGTCACTTATCCACTGACA 2956
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2957 GCAACGGTCCCCTCGCCCCCAAATCCTCCCACCTCTGGGTATCTTCTAACCTGTGAGAAGATGGGGGTCGGGAA 3030
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3031 GGGGACTTGAGTTGCCAGGAACCAGAGTGGGCCCAGTCTATGAGGAAGGAGTGGCCCCTGGGTACCCAGGCCAC 3104
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3105 TGGCTTCAGTGGCTGGCCTCTTGAACACAGTCACAAGCTGGGGGAAGGATCTATTCAAGTGCCCTGACCAGCGA 3178
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3179 CAGGTGGCTCCTGGGACAACTAACTAACTAAGCCCTTGCTCCCAGGCTTGGAATGGCCCAGTCCTCAGTGGGTA 3252
Query 1246 ------------------------------------------------------------------- 1245
Sbjct 3253 GGAGAGCTGAGGAGCCGCAGCAGGACTGAGGTGGGGGTGATATAAATAATATTTATCTTTTCAACTA 3319
