Nucleotide Global Alignment
Description
- Query:
- TRCN0000489143
- Subject:
- XR_939695.2
- Aligned Length:
- 3065
- Identities:
- 1678
- Gaps:
- 1316
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGCTGGCCTGCGCCCCCGAGCCGGATCGGCGGCCGCCCGGACTCCGAGCCCGCGCGGATGTGAGATTCCGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCTGGCGCCTCCCGATCGCCGGCTCCGGCGCGGCGCTGCTTCGCCCAGGAGGCGGCGGCCCCGGCTGGCCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGGCTTGTGGATTTTTAAAAATTTGGCTCCGAGGAGGACCATTTCCTCTCGACATGCATCCCTCCGGATAGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAACATCCCTCCGTTCACCCCCCCGCCCCGCGCGGTCAGAGGCAGGCGCTGAGTGTGCGAAGAGGATCCGGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAAATCTGCGCCCCCGGTTCTCGTCCCCGCCCCGTCCCACCGCCCCATCCCCCTCCCGGAGTCGAAATTTCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGATTATGTTTCGGAAAGGTAGGTAAGCGCCGGGCGCGGCGCCCGCTTTCCCGCAGTCCGGAGCCGGAGAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCGAGGCGGCGAGGCAGCCCCCGCGGCTTGCAGCGGAGCCGACAGCTCGTCTTCTCTTCTGGAGGTGCAGCTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGGTCGGGGGGAGAGACTTGCTCCAAACACGGACATCCCCCAGCTCTCCCCCCTCCCTGTTTTCCGTTAGGAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCGGCGAGGAAATACATGCACTGGCTGAGAATCGCCCGCGCCAGGGCGCAACGCCACAAGGTGTAGGGAGTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCGGGGTGGGGCGAAAGGGGACCCAAGAGTCCCTGTGGCTCGGAGTGCCGGGCCGTCGGTTCTTCATTCCTGCC 740
Query 1 ----------------------------------------------ATGGTAGTGTTCAATGGCCTTCTTAAGA 28
||||||||||||||||||||||||||||
Sbjct 741 CTCGGGGCAGACGGAGTGACCCCGGCCCCCACTCCCCGCCCCGACCATGGTAGTGTTCAATGGCCTTCTTAAGA 814
Query 29 TCAAAATCTGCGAGGCCGTGAGCTTGAAGCCCACAGCCTGGTCGCTGCGCCATGCGGTGGGACCCCGGCCGCAG 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCAAAATCTGCGAGGCCGTGAGCTTGAAGCCCACAGCCTGGTCGCTGCGCCATGCGGTGGGACCCCGGCCGCAG 888
Query 103 ACTTTCCTTCTCGACCCCTACATTGCCCTCAATGTGGACGACTCGCGCATCGGCCAAACGGCCACCAAGCAGAA 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACTTTCCTTCTCGACCCCTACATTGCCCTCAATGTGGACGACTCGCGCATCGGCCAAACGGCCACCAAGCAGAA 962
Query 177 GACCAACAGCCCGGCCTGGCACGACGAGTTCGTCACCGATGTGTGCAACGGACGCAAGATCGAGCTGGCTGTCT 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GACCAACAGCCCGGCCTGGCACGACGAGTTCGTCACCGATGTGTGCAACGGACGCAAGATCGAGCTGGCTGTCT 1036
Query 251 TTCACGATGCCCCCATAGGCTACGACGACTTCGTGGCCAACTGCACCATCCAGTTTGAGGAGCTGCTGCAGAAC 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTCACGATGCCCCCATAGGCTACGACGACTTCGTGGCCAACTGCACCATCCAGTTTGAGGAGCTGCTGCAGAAC 1110
Query 325 GGGAGCCGCCACTTCGAGGACTGGATTGATCTGGAGCCAGAAGGAAGAGTGTATGTGATCATCGATCTCTCAGG 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGGAGCCGCCACTTCGAGGACTGGATTGATCTGGAGCCAGAAGGAAGAGTGTATGTGATCATCGATCTCTCAGG 1184
Query 399 GTCGTCGGGTGAAGCCCCTAAAGACAATGAAGAGCGTGTGTTCAGGGAACGCATGCGGCCGAGGAAGCGGCAGG 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTCGTCGGGTGAAGCCCCTAAAGACAATGAAGAGCGTGTGTTCAGGGAACGCATGCGGCCGAGGAAGCGGCAGG 1258
Query 473 GGGCCGTCAGGCGCAGGGTCCATCAGGTCAACGGCCACAAGTTCATGGCCACCTATCTTCGGCAGCCCACCTAC 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGGCCGTCAGGCGCAGGGTCCATCAGGTCAACGGCCACAAGTTCATGGCCACCTATCTTCGGCAGCCCACCTAC 1332
Query 547 TGCTCCCATTGCAGAGACTTCATCTGGGGTGTCATAGGAAAGCAGGGATACCAGTGTCAAGTCTGCACCTGCGT 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGCTCCCATTGCAGAGACTTCATCTGGGGTGTCATAGGAAAGCAGGGATACCAGTGTCAAGTCTGCACCTGCGT 1406
Query 621 GGTCCACAAGCGGTGCCACGAGCTCATAATCACAAAGTGTGCTGGGTTAAAGAAGCAGGAGACCCCCGACCAGG 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGTCCACAAGCGGTGCCACGAGCTCATAATCACAAAGTGTGCTGGGTTAAAGAAGCAGGAGACCCCCGACCAGG 1480
Query 695 TGGGCTCCCAGCGGTTCAGCGTCAACATGCCCCACAAGTTCGGTATCCACAACTACAAGGTCCCTACCTTCTGC 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TGGGCTCCCAGCGGTTCAGCGTCAACATGCCCCACAAGTTCGGTATCCACAACTACAAGGTCCCTACCTTCTGC 1554
Query 769 GATCACTGTGGGTCCCTGCTCTGGGGACTCTTGCGGCAGGGTTTGCAGTGTAAAGTCTGCAAAATGAATGTTCA 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GATCACTGTGGGTCCCTGCTCTGGGGACTCTTGCGGCAGGGTTTGCAGTGTAAAGTCTGCAAAATGAATGTTCA 1628
Query 843 CCGTCGATGTGAGACCAACGTGGCTCCCAACTGTGGAGTGGATGCCAGAGGAATCGCCAAAGTACTGGCCGACC 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCGTCGATGTGAGACCAACGTGGCTCCCAACTGTGGAGTGGATGCCAGAGGAATCGCCAAAGTACTGGCCGACC 1702
Query 917 TGGGCGTTACCCCAGACAAAATCACCAACAGCGGCCAGAGAAGGAAAAAGCTCATTGCTGGTGCCGAGTCCCCG 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TGGGCGTTACCCCAGACAAAATCACCAACAGCGGCCAGAGAAGGAAAAAGCTCATTGCTGGTGCCGAGTCCCCG 1776
Query 991 CAGCCTGCTTCTGGAAGCTCACCATCTGAGGAAGATCGATCCAAGTCAGCACCCACCTCCCCTTGTGACCAGGA 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CAGCCTGCTTCTGGAAGCTCACCATCTGAGGAAGATCGATCCAAGTCAGCACCCACCTCCCCTTGTGACCAGGA 1850
Query 1065 AATAAAAGAACTTGAGAACAACATTCGGAAAGCCTTGTCATTTGACAACCGAGGAGAGGAGCACCGGGCAGCAT 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AATAAAAGAACTTGAGAACAACATTCGGAAAGCCTTGTCATTTGACAACCGAGGAGAGGAGCACCGGGCAGCAT 1924
Query 1139 CGTCTCCTGATGGCCAGCTGATGAGCCCCGGTGAGAATGGCGAAGTCCGGCAAGGCCAGGCCAAGCGCCTGGGC 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CGTCTCCTGATGGCCAGCTGATGAGCCCCGGTGAGAATGGCGAAGTCCGGCAAGGCCAGGCCAAGCGCCTGGGC 1998
Query 1213 CTGGATGAGTTCAACTTCATCAAGGTGTTGGGCAAAGGCAGCTTTGGCAAGGTCATGTTGGCAGAACTCAAGGG 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CTGGATGAGTTCAACTTCATCAAGGTGTTGGGCAAAGGCAGCTTTGGCAAGGTCATGTTGGCAGAACTCAAGGG 2072
Query 1287 CAAAGATGAAGTATATGCTGTGAAGGTCTTAAAGAAGGACGTCATCCTTCAGGATGATGACGTGGACTGCACAA 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CAAAGATGAAGTATATGCTGTGAAGGTCTTAAAGAAGGACGTCATCCTTCAGGATGATGACGTGGACTGCACAA 2146
Query 1361 TGACAGAGAAGAGGATTTTGGCTCTGGCACGGAAACACCCGTACCTTACCCAACTCTACTGCTGCTTCCAGACC 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TGACAGAGAAGAGGATTTTGGCTCTGGCACGGAAACACCCGTACCTTACCCAACTCTACTGCTGCTTCCAGACC 2220
Query 1435 AAGGACCGCCTCTTTTTCGTCATGGAATATGTAAATGGTGGAGACCTCATGTTTCAGATTCAGCGCTCCCGAAA 1508
||| |.|.||||.|.| ||.||
Sbjct 2221 AAG------------------AGGCAATAGGAA----GTTGA-------------------------------- 2240
Query 1509 ATTCGACGAGCCTCGTTCACGGTTCTATGCTGCAGAGGTCACATCGGCCCTCATGTTCCTCCACCAGCATGGAG 1582
|||||| |||.|..|.|||||| |||||
Sbjct 2241 --------AGCCTC-------------------------CACTTTTGACCTCAT---------------TGGAG 2266
Query 1583 TCATCTACAGGGATTTGAAACTGGACAACAT--CCTTCTGGATGCAGAAGGTCACTGCAAGCTGGCTGACTTCG 1654
||| |||| |....|.||| |.||| .|.|.||||.|.|| |.||| || ||
Sbjct 2267 -CAT---------TTTG----TTTTTACCATGACGTTC--CAGGGAGAATGCCA--GGAAG------GA--TC- 2313
Query 1655 GGATGTGCAAGGAAGGGATTCTGAATGGTGTGACGACCACCACGTTCTGTGGGACTCCTGACTACATAGCTCCT 1728
|||.|||| ||.|.||||| .||.||..|.||||| ||| |
Sbjct 2314 --ATGGGCAA--AAAGAATTCT----------------------CTCAGTCCGCCTCCT-------TAG----T 2350
Query 1729 GAGATCCTGCAGGAGTTGGAGTATGGCCCCTCCGTGGACTGGTGGGCCCTGGGGGTGCTGATGTACGAGA---- 1798
|.| ||||||||..|| ||.|| ||.|.|.||.|||
Sbjct 2351 GTG-----GCAGGAGTATGA----------TCTGT----------------------CTCAAGGACAAGAAGTG 2387
Query 1799 TGATGGCTGGACAGCCTCCCTTTGAGGCC-----------GACAATGAGGACGACCTATTTGAGTCC--ATCC- 1858
||.||.|||| ||||.| |||| .|.|||||.| || .||||| ||||
Sbjct 2388 TGGTGACTGG------TCCCAT---GGCCTATTTAGCTGGAAGAATGAAG-CG--------TAGTCCCTATCCT 2443
Query 1859 ---TCCATGACGACGTGCTGTACCCAG-TCTGGCTCA--GCAAGGAGGCTGTCAGCATCTTGAA---------- 1916
||||.|||.|.| .||.|| |..|||||| .|.|||.||.|.||..|| |||
Sbjct 2444 CTTTCCAAGACCAAG------GCCAAGATGGGGCTCAAGACCAGGGGGTTATCTACA----GAACTGCTGGCCC 2507
Query 1917 AGCTTTCATGACGAAGAATCCCCACAAGCGCCTGGGCTGTGTGGCATCGCAGAATGGCGAGGACGCCATCAAGC 1990
|.|||.|| ||.|| |||||| ||||
Sbjct 2508 ACCTTCCA------------CCTAC-----CCTGGG------------------------GGAC---------- 2530
Query 1991 AGCACCCATTCTTCAA-------------------------------AGAGATTGACTGGGTGCTC-CTGGAGC 2032
|.||| ||||.|| .|||||.||.|.|| |||| .|||..|
Sbjct 2531 --CTCCC--TCTTGAAGGTTGGGATTCTTTTTTTTCTTTTTTTTTTTTGAGATGGAGTCGG-GCTCTGTGGCCC 2599
Query 2033 AGAAGAAGATCAAGCCACCCTTCAAACCACGCATTAAAACCAAAAGAGACGTCAATAATTTTGACCAAGACTTT 2106
|||.
Sbjct 2600 AGAC---------------------------------------------------------------------- 2603
Query 2107 ACCCGGGAAGAGCCGGTACTCACCCTTGTGGACGAAGCAATTGTAAAGCAGATCAACCAGGAGGAATTCAAAGG 2180
Sbjct 2604 -------------------------------------------------------------------------- 2603
Query 2181 TTTCTCCTACTTTGGTGAAGACCTGATGCCC 2211
Sbjct 2604 ------------------------------- 2603