Nucleotide Global Alignment
Description
- Query:
- TRCN0000489207
- Subject:
- XR_001753680.1
- Aligned Length:
- 3571
- Identities:
- 1846
- Gaps:
- 1725
Alignment
Query 1 -------------------------------------ATGCGGGCTCCGGGTGCGGGCGCGGCCTCGGTGGTCT 37
|||||||||||||||||||||||||||||||||||||
Sbjct 1 AGCGGCCCGCGGCCTCAGCTCTCTCTGCTTCCCCAGGATGCGGGCTCCGGGTGCGGGCGCGGCCTCGGTGGTCT 74
Query 38 CGCTGGCGCTGTTGTGGCTGCTGGGGCTGCCGTGGACCTGGAGCGCGGCAGCGGCGCTCGGCGTGTACGTGGGC 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGCTGGCGCTGTTGTGGCTGCTGGGGCTGCCGTGGACCTGGAGCGCGGCAGCGGCGCTCGGCGTGTACGTGGGC 148
Query 112 AGCGGCGGCTGGCGCTTCCTGCGCATCGTCTGCAAGACCGCGAGGCGAGACCTCTTCGGTCTCTCTGTGCTGAT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGCGGCGGCTGGCGCTTCCTGCGCATCGTCTGCAAGACCGCGAGGCGAGACCTCTTCGGTCTCTCTGTGCTGAT 222
Query 186 CCGCGTGCGCCTGGAGCTGCGGCGGCACCAGCGTGCCGGCCACACCATCCCGCGCATCTTTCAGGCGGTAGTGC 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCGCGTGCGCCTGGAGCTGCGGCGGCACCAGCGTGCCGGCCACACCATCCCGCGCATCTTTCAGGCGGTAGTGC 296
Query 260 AGCGACAGCCCGAGCGCCTGGCGCTGGTGGATGCCGGGACCGGCGAGTGCTGGACCTTTGCGCAGCTGGACGCC 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGCGACAGCCCGAGCGCCTGGCGCTGGTGGATGCCGGGACCGGCGAGTGCTGGACCTTTGCGCAGCTGGACGCC 370
Query 334 TACTCCAATGCGGTAGCCAACCTCTTCCGCCAGCTGGGCTTCGCGCCGGGCGACGTGGTGGCCATCTTCCTGGA 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TACTCCAATGCGGTAGCCAACCTCTTCCGCCAGCTGGGCTTCGCGCCGGGCGACGTGGTGGCCATCTTCCTGGA 444
Query 408 GGGCCGGCCGGAGTTCGTGGGGCTGTGGCTGGGCCTGGCCAAGGCGGGCATGGAGGCCGCGCTGCTCAACGTGA 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGGCCGGCCGGAGTTCGTGGGGCTGTGGCTGGGCCTGGCCAAGGCGGGCATGGAGGCCGCGCTGCTCAACGTGA 518
Query 482 ACCTGCGGCGCGAGCCCCTGGCCTTCTGCCTGGGCACCTCGGGCGCTAAGGCCCTGATCTTTGGAGGAGAAATG 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCTGCGGCGCGAGCCCCTGGCCTTCTGCCTGGGCACCTCGGGCGCTAAGGCCCTGATCTTTGGAGGAGAAATG 592
Query 556 GTGGCGGCGGTGGCCGAAGTGAGCGGGCATCTGGGGAAAAGTTTGATCAAGTTCTGCTCTGGAGACTTGGGGCC 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGGCGGCGGTGGCCGAAGTGAGCGGGCATCTGGGGAAAAGTTTGATCAAGTTCTGCTCTGGAGACTTGGGGCC 666
Query 630 CGAGGGCATCTTGCCGGACACCCACCTCCTGGACCCGCTGCTGAAGGAGGCCTCTACTGCCCCCTTGGCACAGA 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGAGGGCATCTTGCCGGACACCCACCTCCTGGACCCGCTGCTGAAGGAGGCCTCTACTGCCCCCTTGGCACAGA 740
Query 704 TCCCCAGCAAGGGCATGGACGATCGTCTTTTCTACATCTACACGTCGGGGACCACCGGGCTGCCCAAGGCTGCC 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCCCCAGCAAGGGCATGGACGATCGTCTTTTCTACATCTACACGTCGGGGACCACCGGGCTGCCCAAGGCTGCC 814
Query 778 ATTGTCGTGCACAGCAGGTACTACCGCATGGCAGCCTTCGGCCACCACGCCTACCGCATGCAGGCGGCTGACGT 851
|||||||||||||
Sbjct 815 ATTGTCGTGCACA------------------------------------------------------------- 827
Query 852 GCTCTATGACTGCCTGCCCCTGTACCACTCGGCAGGAAACATCATCGGCGTGGGGCAGTGTCTCATCTATGGGC 925
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 828 -------------------------------GCAGGAAACATCATCGGCGTGGGGCAGTGTCTCATCTATGGGC 870
Query 926 TGACAGTCGTCCTCCGCAAGAAATTCTCGGCCAGCCGCTTCTGGGACGACTGCATCAAGTACAACTGCAC---- 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 871 TGACAGTCGTCCTCCGCAAGAAATTCTCGGCCAGCCGCTTCTGGGACGACTGCATCAAGTACAACTGCACGATC 944
Query 996 --------------------------------GGTGGTTCAGTACATCGGGGAGATCTGCCGCTACCTGCTGAA 1037
||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 AATGGAGTCAGACACTGTCGCCTTTTGTGTCTGGTGGTTCAGTACATCGGGGAGATCTGCCGCTACCTGCTGAA 1018
Query 1038 GCAGCCGGTGCGCGAGGCGGAGAGGCGACACCGCGTGCGCCTGGCGGTGGGGAACGGGCTGCGTCCTGCCATCT 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 GCAGCCGGTGCGCGAGGCGGAGAGGCGACACCGCGTGCGCCTGGCGGTGGGGAACGGGCTGCGTCCTGCCATCT 1092
Query 1112 GGGAGGAGTTCACGGAGCGCTTCGGCGTACGCCAAATCGGGGAGTTCTACGGCGCCACCGAGTGCAACTGCAGC 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1093 GGGAGGAGTTCACGGAGCGCTTCGGCGTACGCCAAATCGGGGAGTTCTACGGCGCCACCGAGTGCAACTGCAGC 1166
Query 1186 ATTGCCAACATGGACGGCAAGGTCGGCTCCTGTGGTTTCAACAGCCGCATCCTGCCCCACGTGTACCCCATCCG 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167 ATTGCCAACATGGACGGCAAGGTCGGCTCCTGTGGTTTCAACAGCCGCATCCTGCCCCACGTGTACCCCATCCG 1240
Query 1260 GCTGGTGAAGGTCAATGAGGACACAATGGAGCTGCTGCGGGATGCCCAGGGCCTCTGCATCCCCTGCCAGGCCG 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1241 GCTGGTGAAGGTCAATGAGGACACAATGGAGCTGCTGCGGGATGCCCAGGGCCTCTGCATCCCCTGCCAGGCCG 1314
Query 1334 GGGAGCCTGGCCTCCTTGTGGGTCAGATCAACCAACAGGACCCGCTGCGCCGCTTCGATGGCTATGTCAGCGAG 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 GGGAGCCTGGCCTCCTTGTGGGTCAGATCAACCAACAGGACCCGCTGCGCCGCTTCGATGGCTATGTCAGCGAG 1388
Query 1408 AGCGCCACCAGCAAGAAGATCGCCCACAGCGTCTTCAGCAAGGGCGACAGCGCCTACCTCTCAGGTGACGTGCT 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389 AGCGCCACCAGCAAGAAGATCGCCCACAGCGTCTTCAGCAAGGGCGACAGCGCCTACCTCTCAGGTGACGTGCT 1462
Query 1482 AGTGATGGATGAGCTGGGCTACATGTACTTCCGGGACCGTAGCGGGGACACCTTCCGCTGGCGAGGGGAGAACG 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1463 AGTGATGGATGAGCTGGGCTACATGTACTTCCGGGACCGTAGCGGGGACACCTTCCGCTGGCGAGGGGAGAACG 1536
Query 1556 TCTCCACCACCGAGGTGGAGGGCGTGCTGAGCCGCCTGCTGGGCCAGACAGACGTGGCCGTCTATGGGGTGGCT 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537 TCTCCACCACCGAGGTGGAGGGCGTGCTGAGCCGCCTGCTGGGCCAGACAGACGTGGCCGTCTATGGGGTGGCT 1610
Query 1630 GTTCCAGGAGTGGAGGGTAAGGCAGGGATGGCGGCCGTCGCAGACCCCCACAGCCTGCTGGACCCCAACGCGAT 1703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1611 GTTCCAGGAGTGGAGGGTAAGGCAGGGATGGCGGCCGTCGCAGACCCCCACAGCCTGCTGGACCCCAACGCGAT 1684
Query 1704 ATACCAGGAGCTGCAGAAGGTGCTGGCACCCTATGCCCGGCCCATCTTCCTGCGCCTCCTGCCCCAGGTGGACA 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1685 ATACCAGGAGCTGCAGAAGGTGCTGGCACCCTATGCCCGGCCCATCTTCCTGCGCCTCCTGCCCCAGGTGGACA 1758
Query 1778 CCACAGGCACCTTCAAGATCCAGAAGACGAGGCTGCAGCGAGAGGGCTTTGACCCACGCCAGACCTCAGACCGG 1851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1759 CCACAGGCACCTTCAAGATCCAGAAGACGAGGCTGCAGCGAGAGGGCTTTGACCCACGCCAGACCTCAGACCGG 1832
Query 1852 CTCTTCTTCCTGGACCTGAAGCAGGGCCACTACCTGCCCTTAAATGAGGCAGTCTACACTCGCATCTGCTCGGG 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1833 CTCTTCTTCCTGGACCTGAAGCAGGGCCACTACCTGCCCTTAAATGAGGCAGTCTACACTCGCATCTGCTCGGG 1906
Query 1926 CGCCTTCGCCCTC------------------------------------------------------------- 1938
|||||||||||||
Sbjct 1907 CGCCTTCGCCCTCTGAAGCTGTTCCTCTACTGGCCACAAACTCTGGGCCTGGTGGGAGAGGCCAGCTTGAGCCA 1980
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 1981 GACAGCGCTGCCCAGGGGTGGCCGCCTAGTACACACCCACCTGGCCGAGCTGTACCTGGCACGGCCCATCCTGG 2054
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2055 ACTGAGAAACTGGAACCTCAGAGGAACCCGTGCCTCTCTGCTGCCTTGGTGCCCCTGTGTCTGCCTCCTCTCCC 2128
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2129 TGCTTTTCAGCCTCTGTCTCCTTCCATCCCTGTCCCTGTCTGGCCTTAACTCTTCCCTCTTTTTCTTTTCTTTC 2202
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2203 TTTCTTTCTTTTTTTTTTAAGATAGAGTCTCACTCTGCTGCCCGGGCTAGAGTGCAGTGGTGGGATCTCGGCTC 2276
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2277 ACTGCAACCTCTGCCTCCTGGGGTTCAAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAC 2350
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2351 CCGCCACCACGTCCAGCTAATTTTTATATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGTTGGTCTTG 2424
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2425 AACTCCTGACCTCAGGTGATCCGCTGGCCTCGGCCTCCCAGAGTGCTGGGATTATAGGCGTGAGCCTCTGGCCC 2498
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2499 GGCCTTTCCTTTTTCCTCTCCTCTCCTGCCGAGAGTGGAACACGCGTGTCCTGGGAGCTGCATCTTGTGTAGGG 2572
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2573 TCCAGCTGCTTTTGGGGACTGCAGGAATCATCTCCCCTGGGCCCTGGACTCGGACTGGGGCCTCCCCACCTCCC 2646
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2647 TCTCGGCTGTGCCTTACGGAGCCCCGATCCAGGCCTCCTGTGGCTGTTGGGTTCCAGATGCTGCAGCTCCATGT 2720
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2721 GACTTCCAAGCAGGCCCTCCGCCCTCCCTGCTGAATGGAGGAGCCGGGGGTCCCCCAGGCCAACTGGAAAATCT 2794
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2795 CCCAGGCTAGGCCAATTGCCTTTTGCACTTCCCCGTTCCTGTCACATTTCCCCAGCCCCACCTTCCCCTCCTGA 2868
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2869 TGCCCTGAAAGCTTCCGGAATTGACTGTGACCACTTGGATGTCACCACTGTCAGCCCCTGCCTTGATGTCCCCA 2942
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 2943 TTTAGCCATCTCCATGGAGCTCCTGCTGGAGGGCCCTGAACCCTGCACTGCGTGGCTGCCCAGCCAGCTGCCTC 3016
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3017 CTGTCCTGGGAGGAGGCCTCCTGGGTGTCCTCATCTGGTGTGTCTACTGGAGGGTCCCACAGGAGAGGCAGCAG 3090
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3091 AGGGGTCAGGGGAGGTCTCCTGCCGGGGGTTGGCCTCTCAAGCCTCAGGGGTTCTAGCCTGTTGAATATACCCC 3164
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3165 ACCTGGTGGTGGCCCCTCCGATGTCCCCACTGATGGCTCTGACACCGTGTTGGTGGCGATGTCCCAGACAATCC 3238
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3239 CACCAGGACGGCCCAGACATCCCTACTGGCTTCGCTGGTGGCTCATCTCGAACATCCACGCCAGCCTTTCTGGG 3312
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3313 GCCGGCCACCCAGGCCGCCTGTCCGTCTGTCCTCCCTCCAGCAGCACCCCCTGGCCCCTGGAGTGGTGGGGCCA 3386
Query 1939 -------------------------------------------------------------------------- 1938
Sbjct 3387 TGGCAAGAGACACCGTGGCGTCTCATGTGAACTTTCCTGGGCACTGTGGTTTTATTTCCTAATTGATTTAAGAA 3460
Query 1939 ------------------- 1938
Sbjct 3461 ATAAACCTGAAGACCGTCT 3479
