Nucleotide Global Alignment

Description

Query:
TRCN0000489207
Subject:
XR_001753680.1
Aligned Length:
3571
Identities:
1846
Gaps:
1725

Alignment

Query    1  -------------------------------------ATGCGGGCTCCGGGTGCGGGCGCGGCCTCGGTGGTCT  37
                                                 |||||||||||||||||||||||||||||||||||||
Sbjct    1  AGCGGCCCGCGGCCTCAGCTCTCTCTGCTTCCCCAGGATGCGGGCTCCGGGTGCGGGCGCGGCCTCGGTGGTCT  74

Query   38  CGCTGGCGCTGTTGTGGCTGCTGGGGCTGCCGTGGACCTGGAGCGCGGCAGCGGCGCTCGGCGTGTACGTGGGC  111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGCTGGCGCTGTTGTGGCTGCTGGGGCTGCCGTGGACCTGGAGCGCGGCAGCGGCGCTCGGCGTGTACGTGGGC  148

Query  112  AGCGGCGGCTGGCGCTTCCTGCGCATCGTCTGCAAGACCGCGAGGCGAGACCTCTTCGGTCTCTCTGTGCTGAT  185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGCGGCGGCTGGCGCTTCCTGCGCATCGTCTGCAAGACCGCGAGGCGAGACCTCTTCGGTCTCTCTGTGCTGAT  222

Query  186  CCGCGTGCGCCTGGAGCTGCGGCGGCACCAGCGTGCCGGCCACACCATCCCGCGCATCTTTCAGGCGGTAGTGC  259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCGCGTGCGCCTGGAGCTGCGGCGGCACCAGCGTGCCGGCCACACCATCCCGCGCATCTTTCAGGCGGTAGTGC  296

Query  260  AGCGACAGCCCGAGCGCCTGGCGCTGGTGGATGCCGGGACCGGCGAGTGCTGGACCTTTGCGCAGCTGGACGCC  333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGCGACAGCCCGAGCGCCTGGCGCTGGTGGATGCCGGGACCGGCGAGTGCTGGACCTTTGCGCAGCTGGACGCC  370

Query  334  TACTCCAATGCGGTAGCCAACCTCTTCCGCCAGCTGGGCTTCGCGCCGGGCGACGTGGTGGCCATCTTCCTGGA  407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TACTCCAATGCGGTAGCCAACCTCTTCCGCCAGCTGGGCTTCGCGCCGGGCGACGTGGTGGCCATCTTCCTGGA  444

Query  408  GGGCCGGCCGGAGTTCGTGGGGCTGTGGCTGGGCCTGGCCAAGGCGGGCATGGAGGCCGCGCTGCTCAACGTGA  481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGGCCGGCCGGAGTTCGTGGGGCTGTGGCTGGGCCTGGCCAAGGCGGGCATGGAGGCCGCGCTGCTCAACGTGA  518

Query  482  ACCTGCGGCGCGAGCCCCTGGCCTTCTGCCTGGGCACCTCGGGCGCTAAGGCCCTGATCTTTGGAGGAGAAATG  555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ACCTGCGGCGCGAGCCCCTGGCCTTCTGCCTGGGCACCTCGGGCGCTAAGGCCCTGATCTTTGGAGGAGAAATG  592

Query  556  GTGGCGGCGGTGGCCGAAGTGAGCGGGCATCTGGGGAAAAGTTTGATCAAGTTCTGCTCTGGAGACTTGGGGCC  629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTGGCGGCGGTGGCCGAAGTGAGCGGGCATCTGGGGAAAAGTTTGATCAAGTTCTGCTCTGGAGACTTGGGGCC  666

Query  630  CGAGGGCATCTTGCCGGACACCCACCTCCTGGACCCGCTGCTGAAGGAGGCCTCTACTGCCCCCTTGGCACAGA  703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CGAGGGCATCTTGCCGGACACCCACCTCCTGGACCCGCTGCTGAAGGAGGCCTCTACTGCCCCCTTGGCACAGA  740

Query  704  TCCCCAGCAAGGGCATGGACGATCGTCTTTTCTACATCTACACGTCGGGGACCACCGGGCTGCCCAAGGCTGCC  777
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCCCCAGCAAGGGCATGGACGATCGTCTTTTCTACATCTACACGTCGGGGACCACCGGGCTGCCCAAGGCTGCC  814

Query  778  ATTGTCGTGCACAGCAGGTACTACCGCATGGCAGCCTTCGGCCACCACGCCTACCGCATGCAGGCGGCTGACGT  851
            |||||||||||||                                                             
Sbjct  815  ATTGTCGTGCACA-------------------------------------------------------------  827

Query  852  GCTCTATGACTGCCTGCCCCTGTACCACTCGGCAGGAAACATCATCGGCGTGGGGCAGTGTCTCATCTATGGGC  925
                                           |||||||||||||||||||||||||||||||||||||||||||
Sbjct  828  -------------------------------GCAGGAAACATCATCGGCGTGGGGCAGTGTCTCATCTATGGGC  870

Query  926  TGACAGTCGTCCTCCGCAAGAAATTCTCGGCCAGCCGCTTCTGGGACGACTGCATCAAGTACAACTGCAC----  995
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct  871  TGACAGTCGTCCTCCGCAAGAAATTCTCGGCCAGCCGCTTCTGGGACGACTGCATCAAGTACAACTGCACGATC  944

Query  996  --------------------------------GGTGGTTCAGTACATCGGGGAGATCTGCCGCTACCTGCTGAA  1037
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct  945  AATGGAGTCAGACACTGTCGCCTTTTGTGTCTGGTGGTTCAGTACATCGGGGAGATCTGCCGCTACCTGCTGAA  1018

Query 1038  GCAGCCGGTGCGCGAGGCGGAGAGGCGACACCGCGTGCGCCTGGCGGTGGGGAACGGGCTGCGTCCTGCCATCT  1111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019  GCAGCCGGTGCGCGAGGCGGAGAGGCGACACCGCGTGCGCCTGGCGGTGGGGAACGGGCTGCGTCCTGCCATCT  1092

Query 1112  GGGAGGAGTTCACGGAGCGCTTCGGCGTACGCCAAATCGGGGAGTTCTACGGCGCCACCGAGTGCAACTGCAGC  1185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1093  GGGAGGAGTTCACGGAGCGCTTCGGCGTACGCCAAATCGGGGAGTTCTACGGCGCCACCGAGTGCAACTGCAGC  1166

Query 1186  ATTGCCAACATGGACGGCAAGGTCGGCTCCTGTGGTTTCAACAGCCGCATCCTGCCCCACGTGTACCCCATCCG  1259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167  ATTGCCAACATGGACGGCAAGGTCGGCTCCTGTGGTTTCAACAGCCGCATCCTGCCCCACGTGTACCCCATCCG  1240

Query 1260  GCTGGTGAAGGTCAATGAGGACACAATGGAGCTGCTGCGGGATGCCCAGGGCCTCTGCATCCCCTGCCAGGCCG  1333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1241  GCTGGTGAAGGTCAATGAGGACACAATGGAGCTGCTGCGGGATGCCCAGGGCCTCTGCATCCCCTGCCAGGCCG  1314

Query 1334  GGGAGCCTGGCCTCCTTGTGGGTCAGATCAACCAACAGGACCCGCTGCGCCGCTTCGATGGCTATGTCAGCGAG  1407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315  GGGAGCCTGGCCTCCTTGTGGGTCAGATCAACCAACAGGACCCGCTGCGCCGCTTCGATGGCTATGTCAGCGAG  1388

Query 1408  AGCGCCACCAGCAAGAAGATCGCCCACAGCGTCTTCAGCAAGGGCGACAGCGCCTACCTCTCAGGTGACGTGCT  1481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389  AGCGCCACCAGCAAGAAGATCGCCCACAGCGTCTTCAGCAAGGGCGACAGCGCCTACCTCTCAGGTGACGTGCT  1462

Query 1482  AGTGATGGATGAGCTGGGCTACATGTACTTCCGGGACCGTAGCGGGGACACCTTCCGCTGGCGAGGGGAGAACG  1555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1463  AGTGATGGATGAGCTGGGCTACATGTACTTCCGGGACCGTAGCGGGGACACCTTCCGCTGGCGAGGGGAGAACG  1536

Query 1556  TCTCCACCACCGAGGTGGAGGGCGTGCTGAGCCGCCTGCTGGGCCAGACAGACGTGGCCGTCTATGGGGTGGCT  1629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537  TCTCCACCACCGAGGTGGAGGGCGTGCTGAGCCGCCTGCTGGGCCAGACAGACGTGGCCGTCTATGGGGTGGCT  1610

Query 1630  GTTCCAGGAGTGGAGGGTAAGGCAGGGATGGCGGCCGTCGCAGACCCCCACAGCCTGCTGGACCCCAACGCGAT  1703
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1611  GTTCCAGGAGTGGAGGGTAAGGCAGGGATGGCGGCCGTCGCAGACCCCCACAGCCTGCTGGACCCCAACGCGAT  1684

Query 1704  ATACCAGGAGCTGCAGAAGGTGCTGGCACCCTATGCCCGGCCCATCTTCCTGCGCCTCCTGCCCCAGGTGGACA  1777
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1685  ATACCAGGAGCTGCAGAAGGTGCTGGCACCCTATGCCCGGCCCATCTTCCTGCGCCTCCTGCCCCAGGTGGACA  1758

Query 1778  CCACAGGCACCTTCAAGATCCAGAAGACGAGGCTGCAGCGAGAGGGCTTTGACCCACGCCAGACCTCAGACCGG  1851
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1759  CCACAGGCACCTTCAAGATCCAGAAGACGAGGCTGCAGCGAGAGGGCTTTGACCCACGCCAGACCTCAGACCGG  1832

Query 1852  CTCTTCTTCCTGGACCTGAAGCAGGGCCACTACCTGCCCTTAAATGAGGCAGTCTACACTCGCATCTGCTCGGG  1925
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1833  CTCTTCTTCCTGGACCTGAAGCAGGGCCACTACCTGCCCTTAAATGAGGCAGTCTACACTCGCATCTGCTCGGG  1906

Query 1926  CGCCTTCGCCCTC-------------------------------------------------------------  1938
            |||||||||||||                                                             
Sbjct 1907  CGCCTTCGCCCTCTGAAGCTGTTCCTCTACTGGCCACAAACTCTGGGCCTGGTGGGAGAGGCCAGCTTGAGCCA  1980

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 1981  GACAGCGCTGCCCAGGGGTGGCCGCCTAGTACACACCCACCTGGCCGAGCTGTACCTGGCACGGCCCATCCTGG  2054

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2055  ACTGAGAAACTGGAACCTCAGAGGAACCCGTGCCTCTCTGCTGCCTTGGTGCCCCTGTGTCTGCCTCCTCTCCC  2128

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2129  TGCTTTTCAGCCTCTGTCTCCTTCCATCCCTGTCCCTGTCTGGCCTTAACTCTTCCCTCTTTTTCTTTTCTTTC  2202

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2203  TTTCTTTCTTTTTTTTTTAAGATAGAGTCTCACTCTGCTGCCCGGGCTAGAGTGCAGTGGTGGGATCTCGGCTC  2276

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2277  ACTGCAACCTCTGCCTCCTGGGGTTCAAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAC  2350

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2351  CCGCCACCACGTCCAGCTAATTTTTATATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGTTGGTCTTG  2424

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2425  AACTCCTGACCTCAGGTGATCCGCTGGCCTCGGCCTCCCAGAGTGCTGGGATTATAGGCGTGAGCCTCTGGCCC  2498

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2499  GGCCTTTCCTTTTTCCTCTCCTCTCCTGCCGAGAGTGGAACACGCGTGTCCTGGGAGCTGCATCTTGTGTAGGG  2572

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2573  TCCAGCTGCTTTTGGGGACTGCAGGAATCATCTCCCCTGGGCCCTGGACTCGGACTGGGGCCTCCCCACCTCCC  2646

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2647  TCTCGGCTGTGCCTTACGGAGCCCCGATCCAGGCCTCCTGTGGCTGTTGGGTTCCAGATGCTGCAGCTCCATGT  2720

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2721  GACTTCCAAGCAGGCCCTCCGCCCTCCCTGCTGAATGGAGGAGCCGGGGGTCCCCCAGGCCAACTGGAAAATCT  2794

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2795  CCCAGGCTAGGCCAATTGCCTTTTGCACTTCCCCGTTCCTGTCACATTTCCCCAGCCCCACCTTCCCCTCCTGA  2868

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2869  TGCCCTGAAAGCTTCCGGAATTGACTGTGACCACTTGGATGTCACCACTGTCAGCCCCTGCCTTGATGTCCCCA  2942

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 2943  TTTAGCCATCTCCATGGAGCTCCTGCTGGAGGGCCCTGAACCCTGCACTGCGTGGCTGCCCAGCCAGCTGCCTC  3016

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 3017  CTGTCCTGGGAGGAGGCCTCCTGGGTGTCCTCATCTGGTGTGTCTACTGGAGGGTCCCACAGGAGAGGCAGCAG  3090

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 3091  AGGGGTCAGGGGAGGTCTCCTGCCGGGGGTTGGCCTCTCAAGCCTCAGGGGTTCTAGCCTGTTGAATATACCCC  3164

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 3165  ACCTGGTGGTGGCCCCTCCGATGTCCCCACTGATGGCTCTGACACCGTGTTGGTGGCGATGTCCCAGACAATCC  3238

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 3239  CACCAGGACGGCCCAGACATCCCTACTGGCTTCGCTGGTGGCTCATCTCGAACATCCACGCCAGCCTTTCTGGG  3312

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 3313  GCCGGCCACCCAGGCCGCCTGTCCGTCTGTCCTCCCTCCAGCAGCACCCCCTGGCCCCTGGAGTGGTGGGGCCA  3386

Query 1939  --------------------------------------------------------------------------  1938
                                                                                      
Sbjct 3387  TGGCAAGAGACACCGTGGCGTCTCATGTGAACTTTCCTGGGCACTGTGGTTTTATTTCCTAATTGATTTAAGAA  3460

Query 1939  -------------------  1938
                               
Sbjct 3461  ATAAACCTGAAGACCGTCT  3479

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