Nucleotide Global Alignment

Description

• Query: TRCN0000489210
• Subject: XM_006532408.3
• Aligned Length: 1237
• Identities: 878
• Gaps: 221

Alignment

Query    1  ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA  74
            ||||||||.||.|||||||||||.||....||||||||.||.|||||                        |||
Sbjct    1  ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA  50

Query   75  TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGC----------------------  126
            |         |||||..|||.||||||||||||.||.||||.||||..||||                      
Sbjct   51  T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAAAAGAGTCTCCCCCACAGC  115

Query  127  ------------------------------------------------------------------CTGAA---  131
                                                                              |||||   
Sbjct  116  CCCCCGCCGATGATGGAGCGGAGGAACCAGGGTCGGAGACCTCCGATGCTAAGAGCACTCCAACTGCTGAAGAC  189

Query  132  --------------------------------------------------------------------------  131
                                                                                      
Sbjct  190  GTGACTGCGCCCCTAGTGGATGAGAGAGCTCCCGACAAGCAGGCCGCTGCCCAGCCCCACACGGAGATCCCAGA  263

Query  132  ---------AGCTGAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCC  196
                     |||.||||||||||||||.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.|
Sbjct  264  AGGAATTACAGCCGAAGAAGCAGGCATCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTC  337

Query  197  AAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGGGGGCTGATGGTAAA  270
            |||||||..|||.|      |||||||||.||||.||||..||.||.||.|||||||||||.||||||||.|||
Sbjct  338  AAGCTCGTGTGGCC------AGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGGGCGCTGATGGCAAA  405

Query  271  A------CGAAGATCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGAT  338
            |      ||||||||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||
Sbjct  406  ACCGGGGCGAAGATCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGAT  479

Query  339  TCCAGCAAAAACCCCGCCC-GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGC  411
            .||.||.||.|||.||||| || ||.|||||.||.||..|.||.||||||||.||||||||.||.||.||.|||
Sbjct  480  CCCGGCCAAGACCACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGGTGAACCACCAAAATCCGGAGAACGAAGC  552

Query  412  GGCTACAGCAGCCCCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCAC  485
            ||||||||||||||||||||.||.||.||.||.|||||.|||||.||||||||.|||||.|||||.||.|||||
Sbjct  553  GGCTACAGCAGCCCCGGCTCTCCCGGAACGCCTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCAC  626

Query  486  CCGGGAGCCCAAGAAGGTGGCAGTGGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGA  559
            ||||||||||||||||||||||||||||||.|||||.||.|||||.||.||..|....||||||||||||||||
Sbjct  627  CCGGGAGCCCAAGAAGGTGGCAGTGGTCCGCACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGA  700

Query  560  CAGCCCCCGTGCCCATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAG  633
            |.|||||.|||||||||||||||||.||||||||||.|||.|||||.|||||.|||||||||||||||||||||
Sbjct  701  CTGCCCCTGTGCCCATGCCAGACCTAAAGAATGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAG  774

Query  634  CCGGGAGGCGGGAAGGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGGCTCATT  707
            ||.|||||.||.||||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||.||
Sbjct  775  CCAGGAGGTGGCAAGGTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGACCTCCAAGTGTGGCTCGTT  848

Query  708  AGGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGGACAGAG  781
            |||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||||.||||||||||||||||
Sbjct  849  AGGGAACATCCATCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAGCTGGACTTCAAGGACAGAG  922

Query  782  TCCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAAACCCAC  855
            ||||||||||||||||.|||.||||.||||||||||||||||||||.|||||.|||||.|||||||||||||||
Sbjct  923  TCCAGTCGAAGATTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAATAAGAAGATTGAAACCCAC  996

Query  856  AAGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCCAGTGGT  929
            ||||||||||||.|.|||||.||||||||||||||||||||.||.||.||.||.|||||.|||||.||.|||||
Sbjct  997  AAGCTGACCTTCAGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTGTGTATAAGTCACCCGTGGT  1070

Query  930  GTCTGGGGACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTAGACTCGCCCC  1003
            ||||||||||||.|||||||||||.|||||||||||.||.|||||.|||||||||||||||||.|||||.||.|
Sbjct 1071  GTCTGGGGACACATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATCGACATGGTGGACTCACCAC  1144

Query 1004  AGCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTG  1056
            ||||.|||||.|||||.||.||.||||||||.|||.|||||||||||||||||
Sbjct 1145  AGCTTGCCACACTAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGTTTG  1197