Nucleotide Global Alignment
Description
- Query:
- TRCN0000489236
- Subject:
- XM_005264716.3
- Aligned Length:
- 2949
- Identities:
- 999
- Gaps:
- 1948
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATTGTCAGCTCTCCATCCTCCTCCTTCTCAGCTGCTCTGTTCTCGACAGCTTCGGGGAACTGATTCCGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCTTCCAATGAAGTCAATCTACTGGATTCAAAAACAATTCAAGGGGAGCTGGGCTGGATCTCTTATCCATCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGGGTGGGAAGAGATCAGTGGTGTGGATGAACATTACACACCCATCAGGACTTACCAGGTGTGCAATGTCATG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACCACAGTCAAAACAATTGGCTGAGAACAAACTGGGTCCCCAGGAACTCAGCTCAGAAGATTTATGTGGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAGTTCACTCTACGAGACTGCAATAGCATTCCATTGGTTTTAGGAACTTGCAAGGAGACATTCAACCTGTACT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACATGGAGTCTGATGATGATCATGGGGTGAAATTTCGAGAGCATCAGTTTACAAAGATTGACACCATTGCAGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATGAAAGTTTCACTCAAATGGATCTTGGGGACCGTATTCTGAAGCTCAACACTGAGATTAGAGAAGTAGGTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTCAACAAGAAGGGATTTTATTTGGCATTTCAAGATGTTGGTGCTTGTGTTGCCTTGGTGTCTGTGAGAGTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACTTCAAAAAGTGCCCATTTACAGTGAAGAATCTGGCTATGTTTCCAGACACGGTACCCATGGACTCCCAGTCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGGTGGAGGTTAGAGGGTCTTGTGTCAACAATTCTAAGGAGGAAGATCCTCCAAGGATGTACTGCAGTACAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGCGAATGGCTTGTACCCATTGGCAAGTGTTCCTGCAATGCTGGCTATGAAGAAAGAGGTTTTATGTGCCAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTTGTCGACCAGGTTTCTACAAGGCATTGGATGGTAATATGAAGTGTGCTAAGTGCCCGCCTCACAGTTCTACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGGAAGATGGTTCAATGAACTGCAGGTGTGAGAATAATTACTTCCGGGCAGACAAAGACCCTCCATCCATGGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGTACCCGACCTCCATCTTCACCAAGAAATGTTATCTCTAATATAAACGAGACCTCAGTTATCCTGGACTGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTGGCCCCTGGACACAGGAGGCCGGAAAGATGTTACCTTCAACATCATATGTAAAAAATGTGGGTGGAATATA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAACAGTGTGAGCCATGCAGCCCAAATGTCCGCTTCCTCCCTCGACAGTTTGGACTCACCAACACCACGGTGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGTGACAGACCTTCTGGCACATACTAACTACACCTTTGAGATTGATGCCGTTAATGGGGTGTCAGAGCTGAGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCCCACCAAGACAGTTTGCTGCGGTCAGCATCACAACTAATCAGGCTGCTCCATCACCTGTCCTGACGATTAAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAAGATCGGACCTCCAGAAATAGCATCTCTTTGTCCTGGCAAGAACCTGAACATCCTAATGGGATCATATTGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTACGAGGTCAAATACTATGAAAAGCAGGAACAAGAAACAAGTTATACCATTCTGAGGGCAAGAGGCACAAATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTACCATCAGTAGCCTCAAGCCTGACACTATATACGTATTCCAAATCCGAGCCCGAACAGCCGCTGGATATGGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACGAACAGCCGCAAGTTTGAGTTTGAAACTAGTCCAGACTCTTTCTCCATCTCTGGTGAAAGTAGCCAAGTGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATGATCGCCATTTCAGCGGCAGTAGCAATTATTCTCCTCACTGTTGTCATCTATGTTTTGATTGGGAGGTTCT 1702
Query 1 ---------------------------------------------------ATGGGCATTTAAAACTTCCAGGT 23
|||||||||||||||||||||||
Sbjct 1703 GTGGCTATAAGTCAAAACATGGGGCAGATGAAAAAAGACTTCATTTTGGCAATGGGCATTTAAAACTTCCAGGT 1776
Query 24 CTCAGGACTTATGTTGACCCACATACATATGAAGACCCTACCCAAACTGTTCATGAGTTTGCCAAGGAATTGGA 97
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 1777 CTCAGGACTTATGTTGACCCACATACATATGAAGACCCTACCCAAGCTGTTCATGAGTTTGCCAAGGAATTGGA 1850
Query 98 TGCCACCAACATATCCATTGATAAAGTTGTTGGAGCAGGTGAATTTGGAGAGGTGTGCAGTGGTCGCTTAAAAC 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TGCCACCAACATATCCATTGATAAAGTTGTTGGAGCAGGTGAATTTGGAGAGGTGTGCAGTGGTCGCTTAAAAC 1924
Query 172 TTCCTTCAAAAAAAGAGATTTCAGTGGCCATTAAGACCCTGAAAGTTGGCTACACAGAAAAGCAGAGGAGAGAC 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TTCCTTCAAAAAAAGAGATTTCAGTGGCCATTAAGACCCTGAAAGTTGGCTACACAGAAAAGCAGAGGAGAGAC 1998
Query 246 TTCCTGGGAGAAGCAAGCATTATGGGACAGTTTGACCACCCCAATATCATTCGACTGGAAGGAGTTGTTACCAA 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TTCCTGGGAGAAGCAAGCATTATGGGACAGTTTGACCACCCCAATATCATTCGACTGGAAGGAGTTGTTACCAA 2072
Query 320 AAGTAAGCCAGTTATGATTGTCACAGAATACATGGAGAATGGTTCCTTGGATAGTTTCCTACGTAAACACGATG 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AAGTAAGCCAGTTATGATTGTCACAGAATACATGGAGAATGGTTCCTTGGATAGTTTCCTACGTAAACACGATG 2146
Query 394 CCCAGTTTACTGTCATTCAGCTAGTGGGGATGCTTCGAGGGATAGCATCTGGCATGAAGTACCTGTCAGACATG 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CCCAGTTTACTGTCATTCAGCTAGTGGGGATGCTTCGAGGGATAGCATCTGGCATGAAGTACCTGTCAGACATG 2220
Query 468 GGCTATGTTCACCGAGACCTCGCTGCTCGGAACATCTTGATCAACAGTAACTTGGTGTGTAAGGTTTCTGATTT 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GGCTATGTTCACCGAGACCTCGCTGCTCGGAACATCTTGATCAACAGTAACTTGGTGTGTAAGGTTTCTGATTT 2294
Query 542 CGGACTTTCGCGTGTCCTGGAGGATGACCCAGAAGCTGCTTATACAACAAGAGGAGGGAAGATCCCAATCAGGT 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CGGACTTTCGCGTGTCCTGGAGGATGACCCAGAAGCTGCTTATACAACAAGAGGAGGGAAGATCCCAATCAGGT 2368
Query 616 GGACATCACCAGAAGCTATAGCCTACCGCAAGTTCACGTCAGCCAGCGATGTATGGAGTTATGGGATTGTTCTC 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GGACATCACCAGAAGCTATAGCCTACCGCAAGTTCACGTCAGCCAGCGATGTATGGAGTTATGGGATTGTTCTC 2442
Query 690 TGGGAGGTGATGTCTTATGGAGAGAGACCATACTGGGAGATGTCCAATCAGGATGTAATTAAAGCTGTAGATGA 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 TGGGAGGTGATGTCTTATGGAGAGAGACCATACTGGGAGATGTCCAATCAGGATGTAATTAAAGCTGTAGATGA 2516
Query 764 GGGCTATCGACTGCCACCCCCCATGGACTGCCCAGCTGCCTTGTATCAGCTGATGCTGGACTGCTGGCAGAAAG 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GGGCTATCGACTGCCACCCCCCATGGACTGCCCAGCTGCCTTGTATCAGCTGATGCTGGACTGCTGGCAGAAAG 2590
Query 838 ACAGGAACAACAGACCCAAGTTTGAGCAGATTGTTAGTATTCTGGACAAGCTTATCCGGAATCCCGGCAGCCTG 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 ACAGGAACAACAGACCCAAGTTTGAGCAGATTGTTAGTATTCTGGACAAGCTTATCCGGAATCCCGGCAGCCTG 2664
Query 912 AAGATCATCACCAGTGCAGCCGCAAGGCCATCAAACCTTCTTCTGGACCAAAGCAATGTGGATATCACTACCTT 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 AAGATCATCACCAGTGCAGCCGCAAGGCCATCAAACCTTCTTCTGGACCAAAGCAATGTGGATATCACTACCTT 2738
Query 986 CCGCACAACAGGTGACTGGCTTAATGGTGTCTGGACAGCACACTGCAAGGAAATCTTCACGGGTGTGGAGTACA 1059
|||||||||| |||||.
Sbjct 2739 CCGCACAACA-GTGACA--------------------------------------------------------- 2754
Query 1060 GTTCTTGTGACACAATAGCCAAGATTTCCACAGATGACATGAAAAAGGTTGGTGTCACCGTGGTTGGGCCACAG 1133
Sbjct 2755 -------------------------------------------------------------------------- 2754
Query 1134 AAGAAGATCATCAGTAGCATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTG 1196
Sbjct 2755 --------------------------------------------------------------- 2754
