Nucleotide Global Alignment
Description
- Query:
- TRCN0000489251
- Subject:
- XM_017025428.2
- Aligned Length:
- 2967
- Identities:
- 1864
- Gaps:
- 1098
Alignment
Query 1 ATGGAGGTGGTGGGTGACTTCGAGTACAGCAAGAGGGATCTCGTGGGACACGGGGCCTTCGCCGTGGTCTTCCG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGGGCGGCACCGCCAGAAAACTGATTGGGAGGTAGCTATTAAAAGTATTAATAAAAAGAACTTGTCAAAATCAC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AAATACTGCTTGGAAAGGAAATTAAAATCTTAAAGGAACTTCAGCATGAAAATATTGTAGCACTCTATGATGTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CAGGAATTACCCAACTCTGTCTTTTTGGTGATGGAGTATTGCAATGGTGGAGACCTCGCAGATTATTTGCAAGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAAAGGGACTCTCAGTGAAGACACGATCAGAGTGTTTCTGCATCAGATTGCTGCTGCCATGCGAATCCTGCACA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GCAAAGGAATCATCCACAGAGATCTCAAACCACAGAACATCTTGCTGTCCTATGCCAATCGCAGAAAATCAAGT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GTCAGTGGTATTCGCATCAAAATAGCGGATTTTGGTTTTGCTCGTTACCTACATAGTAACATGATGGCTGCAAC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ACTGTGTGGATCCCCGATGTACATGGCTCCTGAGGTTATTATGTCTCAACATTATGATGCTAAGGCTGACTTGT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GGAGCATAGGAACAGTGATATACCAATGCCTAGTTGGAAAACCACCTTTTCAGAAGCGTTTTTTAGCCATCCTT 666
.|||| |||| |||||.||||||||||||||||
Sbjct 1 ---------------------------------ATGGA-------CTTT---GAAGCATTTTTTAGCCATCCTT 31
Query 667 TTCTTGAGCAAGGTCCAGTAAAAAAATCTTGCCCAGTTCCAGTGCCCATGTATTCTGGTTCTGTCTCTGGAAGC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 32 TTCTTGAGCAAGGTCCAGTAAAAAAATCTTGCCCAGTTCCAGTGCCCATGTATTCTGGTTCTGTCTCTGGAAGC 105
Query 741 TCCTGTGGCAGCTCTCCATCTTGTCGTTTTGCTTCTCCACCA-------------------------------- 782
||||||||||||||||||||||||||||||||||||||||||
Sbjct 106 TCCTGTGGCAGCTCTCCATCTTGTCGTTTTGCTTCTCCACCATCCCTTCCAGATATGCAGCATATTCAGGAAGA 179
Query 783 -------------------------------------------------------------------------- 782
Sbjct 180 AAACTTATCTTCCCCACCATTGGGTCCTCCCAACTATCTACAAGTTTCCAAAGATTCTGCCAGTACTAGTAGCA 253
Query 783 ------------------------------------------------------------------GTGATATG 790
||||||||
Sbjct 254 AGAACTCTTCTTGTGACACGGATGACTTTGTTTTGGTGCCACACAACATCTCGTCAGACCACTCATGTGATATG 327
Query 791 CCAATGGGGACTGCTGGCAGACGTGCTTCAAATGAATTCTTGGTGTGTGGAGGGCAGTGTCAGCCTACTGTGTC 864
|||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 328 CCAGTGGGGACTGCTGGCAGACGTGCTTCAAATGAATTCTTGGTGTGTGGAGGGCAGTGTCAGCCTACTGTGTC 401
Query 865 ACCTCACAGCGAAACAGCACCAATTCCAGTTCCTACTCAAATAAGGAATTATCAGCGCATAGAGCAGAATCTTA 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 402 ACCTCACAGCGAAACAGCACCAATTCCAGTTCCTACTCAAATAAGGAATTATCAGCGCATAGAGCAGAATCTTA 475
Query 939 CATCTACTGCCAGCTCAGGCACAAATGTACATGGTTCTCCAAGATCTGCAGTGGTACGAAGGTCCAACACCAGC 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 476 CATCTACTGCCAGCTCAGGCACAAATGTACATGGTTCTCCAAGATCTGCAGTGGTACGAAGGTCCAACACCAGC 549
Query 1013 CCCATGGGCTTCCTCCGGCCGGGATCATGCTCCCCAGTACCAGCAGACACAGCACAGACAGTTGGACGAAGGCT 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 550 CCCATGGGCTTCCTCCGGCCGGGATCATGCTCCCCAGTACCAGCAGACACAGCACAGACAGTTGGACGAAGGCT 623
Query 1087 CTCCACTGGGTCTTCTAGGCCTTACTCACCTTCCCCTTTGGTTGGTACCATTCCTGAGCAATTCAGTCAGTGCT 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 624 CTCCACTGGGTCTTCTAGGCCTTACTCACCTTCCCCTTTGGTTGGTACCATTCCTGAGCAATTCAGTCAGTGCT 697
Query 1161 GCTGTGGGCATCCTCAGGGCCATGACTCCAGGAGTAGAAACTCCTCAGGTTCTCCAGTGCCACAAGCTCAGTCC 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 698 GCTGTGGGCATCCTCAGGGCCATGACTCCAGGAGTAGAAACTCCTCAGGTTCTCCAGTGCCACAAGCTCAGTCC 771
Query 1235 CCACAGTCTCTCTTATCGGGTGCTAGACTGCAGAGCGCCCCCACCCTCACTGACATCTATCAGAACAAGCAGAA 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 CCACAGTCTCTCTTATCGGGTGCTAGACTGCAGAGCGCCCCCACCCTCACTGACATCTATCAGAACAAGCAGAA 845
Query 1309 GCTCAGAAAACAGCACTCTGACCCCGTGTGCCCATCCCATACTGGGGCTGGGTACAGCTACTCGCCTCAGCCCA 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 846 GCTCAGAAAACAGCACTCTGACCCCGTGTGCCCATCCCATACTGGGGCTGGGTACAGCTACTCGCCTCAGCCCA 919
Query 1383 GTCGGCCTGGCAGCCTTGGAACTTCTCCCACCAAGCACTTGGGGTCCTCTCCACGGAGTTCTGACTGGTTCTTT 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 920 GTCGGCCTGGCAGCCTTGGAACTTCTCCCACCAAGCACTTGGGGTCCTCTCCACGGAGTTCTGACTGGTTCTTT 993
Query 1457 AAAACTCCTTTGCCAACAATCATTGGCTCTCCTACTAAGACCACAGCTCCTTTCAAAATCCCTAAAACTCAAGC 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 994 AAAACTCCTTTGCCAACAATCATTGGCTCTCCTACTAAGACCACAGCTCCTTTCAAAATCCCTAAAACTCAAGC 1067
Query 1531 ATCTTCCAACCTGTTAGCCTTGGTTACTCGTCATGGGCCTGCTGAAGAACAGTCGAAAGATGGGAATGAGCCAC 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1068 ATCTTCCAACCTGTTAGCCTTGGTTACTCGTCATGGGCCTGCTGAAGAACAGTCGAAAGATGGGAATGAGCCAC 1141
Query 1605 GGGAATGTGCCCATTGCCTCTTAGTGCAAGGAAGTGAGAGGCAGCGGGCCGAGCAGCAGAGCAAGGCAGTGTTT 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1142 GGGAATGTGCCCATTGCCTCTTAGTGCAAGGAAGTGAGAGGCAGCGGGCCGAGCAGCAGAGCAAGGCAGTGTTT 1215
Query 1679 GGCAGATCTGTCAGTACCGGGAAGTTATCAGATCAACAAGGAAAGACTCCTATATGTCGACATCAGGGCAGCAC 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1216 GGCAGATCTGTCAGTACCGGGAAGTTATCAGATCAACAAGGAAAGACTCCTATATGTCGACATCAGGGCAGCAC 1289
Query 1753 AGACAGTTTAAATACAGAACGACCAATGGATATAGCTCCGGCAGGAGCCTGTGGTGGTGTTCTGGCACCTCCTG 1826
||||||||||||||||||||||||||||||||
Sbjct 1290 AGACAGTTTAAATACAGAACGACCAATGGATA------------------------------------------ 1321
Query 1827 CAGGTACAGCAGCAAGTTCCAAGGCTGTCCTCTTCACTGTAGGGTCTCCTCCACACAGTGCAGCAGCCCCCACT 1900
||||||||||||||||||||||.||||||||||||
Sbjct 1322 ---------------------------------------TAGGGTCTCCTCCACACAGTGCGGCAGCCCCCACT 1356
Query 1901 TGTACCCACATGTTCCTTCGAACAAGAACAACCTC--------------------------------------- 1935
|||||||||||||||||||||||||||||||||||
Sbjct 1357 TGTACCCACATGTTCCTTCGAACAAGAACAACCTCAGTGGGGCCCAGCAACTCCGGGGGCTCTCTTTGTGCCAT 1430
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 1431 GAGTGGCCGCGTGTGCGTGGGGTCCCCGCCTGGCCCAGGCTTCGGCTCTTCCCCTCCAGGAGCAGAGGCAGCTC 1504
Query 1936 -------------------------------------------------------------------------- 1935
Sbjct 1505 CCAGCCTGAGATACGTGCCTTACGGTGCTTCACCCCCCAGCCTAGAGGGGCTCATCACCTTTGAAGCCCCTGAA 1578
Query 1936 ----------------------AGCGGGAACACACAGACACCTTACGCCATCTGAATGTGATGCTGATGTTCAC 1987
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1579 CTGCCGGAGGAGACGCTGATGGAGCGGGAACACACAGACACCTTACGCCATCTGAATGTGATGCTGATGTTCAC 1652
Query 1988 TGAGTGTGTGCTGGACCTGACAGCCATGAGGGGAGGAAACCCTGAGCTGTGCACATCTGCTGTGTCCTTGTACC 2061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1653 TGAGTGTGTGCTGGACCTGACAGCCATGAGGGGAGGAAACCCTGAGCTGTGCACATCTGCTGTGTCCTTGTACC 1726
Query 2062 AGATCCAGGAGAGTGTGGTGGTGGACCAGATCAGTCAGCTGAGCAAAGACTGGGGGCGGGTGGAGCAGCTGGTG 2135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1727 AGATCCAGGAGAGTGTGGTGGTGGACCAGATCAGTCAGCTGAGCAAAGACTGGGGGCGGGTGGAGCAGCTGGTG 1800
Query 2136 TTGTACATGAAAGCAGCACAGCTGCTTGCGGCTTCTCTGCATCTTGCCAAAGCCCAGATCAAGTCCGGGAAACT 2209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1801 TTGTACATGAAAGCAGCACAGCTGCTTGCGGCTTCTCTGCATCTTGCCAAAGCCCAGATCAAGTCCGGGAAACT 1874
Query 2210 GAGCCCATCCACAGCTGTGAAACAAGTTGTCAAGAATCTGAACGAACGATATAAATTCTGCATCACCATGTGCA 2283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1875 GAGCCCATCCACAGCTGTGAAACAAGTTGTCAAGAATCTGAACGAACGATATAAATTCTGCATCACCATGTGCA 1948
Query 2284 AGAAACTTACAGAAAAGCTGAATCGATTCTTCTCTGACAAACAGAGGTTTATTGATGAAGTCAACAGTGTGACT 2357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1949 AGAAACTTACAGAAAAGCTGAATCGATTCTTCTCTGACAAACAGAGGTTTATTGATGAAATCAACAGTGTGACT 2022
Query 2358 GCAGAGAAACTCATCTATAATTGTGCTGTAGAAATGGTTCAGTCTGCAGCCCTGGATGAGATGTTTCAGCAGAC 2431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2023 GCAGAGAAACTCATCTATAATTGTGCTGTAGAAATGGTTCAGTCTGCAGCCCTGGATGAGATGTTTCAGCAGAC 2096
Query 2432 CGAAGATATTGTTTATCGCTATCATAAGGCAGCCCTTCTTTTGGAAGGCCTAAGTAGGATTCTACAGGACCCTG 2505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2097 CGAAGATATTGTTTATCGCTATCATAAGGCAGCCCTTCTTTTGGAAGGCCTAAGTAGGATTCTACAGGACCCTG 2170
Query 2506 CAGATATTGAAAATGTGCATAAATATAAATGTAGTATTGAGAGAAGACTGTCGGCGCTCTGCCATAGCACCGCA 2579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2171 CAGATATTGAAAATGTGCATAAATATAAATGTAGTATTGAGAGAAGACTGTCGGCGCTCTGCCATAGCACCGCA 2244
Query 2580 ACCGTGG 2586
||||||
Sbjct 2245 ACCGTG- 2250
