Nucleotide Global Alignment

Description

• Query: TRCN0000489265
• Subject: NM_001285454.1
• Aligned Length: 1399
• Identities: 876
• Gaps: 383

Alignment

Query    1  ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA  74
            ||||||||.||.|||||||||||.||....||||||||.||.|||||                        |||
Sbjct    1  ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA  50

Query   75  TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAGA  148
            |         |||||..|||.||||||||||||.||.||||.||||..||||.|.||                 
Sbjct   51  T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAAA-----------------  98

Query  149  CCCCCACTGAGGACGGATCTGAGGAACCGGGCTCTGAAACCTCTGATGCTAAGAGCACTCCAACAGCGGAAGAT  222
                                                                                      
Sbjct   99  --------------------------------------------------------------------------  98

Query  223  GTGACAGCACCCTTAGTGGATGAGGGAGCTCCCGGCAAGCAGGCTGCCGCGCAGCCCCACACGGAGATCCCAGA  296
                                                                                      
Sbjct   99  --------------------------------------------------------------------------  98

Query  297  AGGAACCACAGCTGAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCC  370
                     |||.||||||||||||||.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.|
Sbjct   99  ---------AGCCGAAGAAGCAGGCATCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTC  163

Query  371  AAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGGGGGCTGATGGTAAA  444
            |||||||..|||.|      |||||||||.||||.||||..||.||.||.|||||||||||.||||||||.|||
Sbjct  164  AAGCTCGTGTGGCC------AGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGGGCGCTGATGGCAAA  231

Query  445  A------CGAAGATCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGAT  512
            |      ||||||||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||
Sbjct  232  ACCGGGGCGAAGATCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGAT  305

Query  513  TCCAGCAAAAACCCCGCCC-GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGC  585
            .||.||.||.|||.||||| || ||.|||||.||.||..|.||.||||||||.||||||||.||.||.||.|||
Sbjct  306  CCCGGCCAAGACCACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGGTGAACCACCAAAATCCGGAGAACGAAGC  378

Query  586  GGCTACAGCAGCCCCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCAC  659
            ||||||||||||||||||||.||.||.||.||.|||||.|||||.||||||||.|||||.|||||.||.|||||
Sbjct  379  GGCTACAGCAGCCCCGGCTCTCCCGGAACGCCTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCAC  452

Query  660  CCGGGAGCCCAAGAAGGTGGCAGTGGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGA  733
            ||||||||||||||||||||||||||||||.|||||.||.|||||.||.||..|....||||||||||||||||
Sbjct  453  CCGGGAGCCCAAGAAGGTGGCAGTGGTCCGCACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGA  526

Query  734  CAGCCCCCGTGCCCATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAG  807
            |.|||||.|||||||||||||||||.||||||||||.|||.|||||.|||||.|||||||||||||||||||||
Sbjct  527  CTGCCCCTGTGCCCATGCCAGACCTAAAGAATGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAG  600

Query  808  CCGGGAGGCGGGAAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAA  881
            ||.|||||.||.|||                                                           
Sbjct  601  CCAGGAGGTGGCAAG-----------------------------------------------------------  615

Query  882  GGATAATATCAAACACGTCCCGGGAGGCGGCAGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGA  955
                                              |||||||||||||||||.||.||.|||||||||||.||||
Sbjct  616  ----------------------------------GTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGA  655

Query  956  CCTCCAAGTGTGGCTCATTAGGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAG  1029
            ||||||||||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||
Sbjct  656  CCTCCAAGTGTGGCTCGTTAGGGAACATCCATCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAG  729

Query 1030  CTTGACTTCAAGGACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAA  1103
            ||.||||||||||||||||||||||||||||||||.|||.||||.||||||||||||||||||||.|||||.||
Sbjct  730  CTGGACTTCAAGGACAGAGTCCAGTCGAAGATTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAA  803

Query 1104  TAAAAAGATTGAAACCCACAAGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCG  1177
            |||.|||||||||||||||||||||||||||.|.|||||.||||||||||||||||||||.||.||.||.||.|
Sbjct  804  TAAGAAGATTGAAACCCACAAGCTGACCTTCAGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTG  877

Query 1178  TGTACAAGTCGCCAGTGGTGTCTGGGGACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATC  1251
            ||||.|||||.||.|||||||||||||||||.|||||||||||.|||||||||||.||.|||||.|||||||||
Sbjct  878  TGTATAAGTCACCCGTGGTGTCTGGGGACACATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATC  951

Query 1252  GACATGGTAGACTCGCCCCAGCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGG-------  1318
            ||||||||.|||||.||.|||||.|||||.|||||.||.||.||||||||.|||.||||||||||||       
Sbjct  952  GACATGGTGGACTCACCACAGCTTGCCACACTAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGAAAAGC  1025

Query 1319  -------------------GTTTG-------------------------------------------  1323
                               |||||                                           
Sbjct 1026  TGCTTTACTGAGTTCTCAAGTTTGGAACTACAGCCATGATTTGGCCACCATTACAGACCTGGGACTT  1092