Nucleotide Global Alignment
Description
- Query:
- TRCN0000489265
- Subject:
- XM_006532409.2
- Aligned Length:
- 1330
- Identities:
- 946
- Gaps:
- 227
Alignment
Query 1 ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA 74
||||||||.||.|||||||||||.||....||||||||.||.||||| |||
Sbjct 1 ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA 50
Query 75 TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAGA 148
| |||||..|||.||||||||||||.||.||||.||||..||||.|.|||||.|||||||..|||.
Sbjct 51 T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAAAAGAGTCTCCCCCACAGC 115
Query 149 CCCCCACTGAGGACGGATCTGAGGAACCGGGCTCTGAAACCTCTGATGCTAAGAGCACTCCAACAGCGGAAGAT 222
|||||.|.||.||.|||.|.||||||||.||.||.||.|||||.||||||||||||||||||||.||.||
Sbjct 116 CCCCCGCCGATGATGGAGCGGAGGAACCAGGGTCGGAGACCTCCGATGCTAAGAGCACTCCAACTGCTGA---- 185
Query 223 GTGACAGCACCCTTAGTGGATGAGGGAGCTCCCGGCAAGCAGGCTGCCGCGCAGCCCCACACGGAGATCCCAGA 296
Sbjct 186 -------------------------------------------------------------------------- 185
Query 297 AGGAACCACAGCTGAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCC 370
|||.||||||||||||||.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.|
Sbjct 186 ---------AGCCGAAGAAGCAGGCATCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTC 250
Query 371 AAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGGGGGCTGATGGTAAA 444
|||||||..|||.| |||||||||.||||.||||..||.||.||.|||||||||||.||||||||.|||
Sbjct 251 AAGCTCGTGTGGCC------AGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGGGCGCTGATGGCAAA 318
Query 445 A------CGAAGATCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGAT 512
| ||||||||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||
Sbjct 319 ACCGGGGCGAAGATCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGAT 392
Query 513 TCCAGCAAAAACCCCGCCC-GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGC 585
.||.||.||.|||.||||| || ||.|||||.||.||..|.||.||||||||.||||||||.||.||.||.|||
Sbjct 393 CCCGGCCAAGACCACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGGTGAACCACCAAAATCCGGAGAACGAAGC 465
Query 586 GGCTACAGCAGCCCCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCAC 659
||||||||||||||||||||.||.||.||.||.|||||.|||||.||||||||.|||||.|||||.||.|||||
Sbjct 466 GGCTACAGCAGCCCCGGCTCTCCCGGAACGCCTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCAC 539
Query 660 CCGGGAGCCCAAGAAGGTGGCAGTGGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGA 733
||||||||||||||||||||||||||||||.|||||.||.|||||.||.||..|....||||||||||||||||
Sbjct 540 CCGGGAGCCCAAGAAGGTGGCAGTGGTCCGCACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGA 613
Query 734 CAGCCCCCGTGCCCATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAG 807
|.|||||.|||||||||||||||||.||||||||||.|||.|||||.|||||.|||||||||||||||||||||
Sbjct 614 CTGCCCCTGTGCCCATGCCAGACCTAAAGAATGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAG 687
Query 808 CCGGGAGGCGGGAAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAA 881
||.|||||.||.|||
Sbjct 688 CCAGGAGGTGGCAAG----------------------------------------------------------- 702
Query 882 GGATAATATCAAACACGTCCCGGGAGGCGGCAGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGA 955
|||||||||||||||||.||.||.|||||||||||.||||
Sbjct 703 ----------------------------------GTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGA 742
Query 956 CCTCCAAGTGTGGCTCATTAGGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAG 1029
||||||||||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||
Sbjct 743 CCTCCAAGTGTGGCTCGTTAGGGAACATCCATCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAG 816
Query 1030 CTTGACTTCAAGGACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAA 1103
||.||||||||||||||||||||||||||||||||.|||.||||.||||||||||||||||||||.|||||.||
Sbjct 817 CTGGACTTCAAGGACAGAGTCCAGTCGAAGATTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAA 890
Query 1104 TAAAAAGATTGAAACCCACAAGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCG 1177
|||.|||||||||||||||||||||||||||.|.|||||.||||||||||||||||||||.||.||.||.||.|
Sbjct 891 TAAGAAGATTGAAACCCACAAGCTGACCTTCAGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTG 964
Query 1178 TGTACAAGTCGCCAGTGGTGTCTGGGGACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATC 1251
||||.|||||.||.|||||||||||||||||.|||||||||||.|||||||||||.||.|||||.|||||||||
Sbjct 965 TGTATAAGTCACCCGTGGTGTCTGGGGACACATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATC 1038
Query 1252 GACATGGTAGACTCGCCCCAGCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTG 1323
||||||||.|||||.||.|||||.|||||.|||||.||.||.||||||||.|||.|||||||||||||||||
Sbjct 1039 GACATGGTGGACTCACCACAGCTTGCCACACTAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGTTTG 1110