Nucleotide Global Alignment

Description

Query:
TRCN0000489266
Subject:
XM_017317738.1
Aligned Length:
1823
Identities:
1393
Gaps:
304

Alignment

Query    1  ATGCTGAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGGA  74
            |||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTGAGCAGGTTGATGAGCGGCAGCAGCAGGAGTCTGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGGA  74

Query   75  CGACAGCGAGTACACCTGCACCATCCAGAGAGATGCCAAAGGCCAGTACCTGTTTGACCTTCTTTGCCACCATC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|
Sbjct   75  CGACAGCGAGTACACCTGCACCATCCAGAGAGATGCCAAAGGCCAGTACCTGTTTGACCTCCTTTGCCACCACC  148

Query  149  TGAACCTACTTGAGAAAGACTATTTTGGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGAATTT  222
            ||||||||||||||||||||||.|||||.||.||.|||||.||||||||||||||||||||||||.||||.|||
Sbjct  149  TGAACCTACTTGAGAAAGACTACTTTGGGATTCGTTTTGTGGACCCAGATAAGCAGCGGCATTGGTTGGAGTTT  222

Query  223  ACAAAGTCTGTGGTGAAACAATTGAGATCCCAGCCTCCATTCACCATGTGCTTCCGTGTGAAGTTTTATCCTGC  296
            ||||||||.||||||||.||..||||||||||||||||.|||||||||||||||||.|||||||||||.|||||
Sbjct  223  ACAAAGTCAGTGGTGAAGCAGCTGAGATCCCAGCCTCCGTTCACCATGTGCTTCCGCGTGAAGTTTTACCCTGC  296

Query  297  AGACCCTGCTGCTCTGAAAGAAGAAATAACCAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACCATG  370
            .|||||.|||||.||||||||.||||||||||||||.|||||||||||.|||||||||||||||||||||||.|
Sbjct  297  CGACCCCGCTGCCCTGAAAGAGGAAATAACCAGGTACTTAGTCTTCCTTCAGATCAAAAGGGATCTCTACCACG  370

Query  371  GCCGACTCCTCTGTAAAACATCGGATGCTGCCTTGTTAGCAGCTTACATCCTTCAAGCGGAGATTGGGGATTAT  444
            ||||.||.||||||||||||||||||||.|||||||||||.||.||.|||||||||||||||||||||||||||
Sbjct  371  GCCGTCTTCTCTGTAAAACATCGGATGCCGCCTTGTTAGCGGCCTATATCCTTCAAGCGGAGATTGGGGATTAT  444

Query  445  GACTCAGGGAAA-CACCCTGAAGGCTACAGCTCCAAGTTCCAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAA  517
            ||| |.|||||| |||||||||||||||||||||||||||||.||||||||.||||||||||||||.|||||||
Sbjct  445  GAC-CCGGGAAAGCACCCTGAAGGCTACAGCTCCAAGTTCCAATTTTTCCCGAAACATTCAGAGAAACTGGAAA  517

Query  518  GGAAAATTGCTGAGATTCACAAGACGGAACTGAGTGGTCAAACACCAGCAACATCAGAGCTGAACTTCTTAAGA  591
            .||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.|||||||||
Sbjct  518  AGAAAATTGCTGAGATTCACAAGACCGAACTCAGTGGTCAAACACCAGCAACATCAGAGCTGAATTTCTTAAGA  591

Query  592  AAAGCACAGACATTGGAAACATATGGAGTGGATCCTCACCCATGTAAGGACGTGTCAGGAAATGCTGCATTTCT  665
            ||.||.|||||.||.||.||.||.||||||||.|||||||||||||||||.|||||.|||||||||||.|||||
Sbjct  592  AAGGCCCAGACGTTAGAGACCTACGGAGTGGACCCTCACCCATGTAAGGATGTGTCGGGAAATGCTGCGTTTCT  665

Query  666  GGCCTTCACTCCTTTTGGGTTTGTTGTTCTTCAAGGAAACAAGAGGGTCCACTTCATTAAA-------------  726
            |||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||             
Sbjct  666  GGCCTTCACTCCTTTCGGGTTTGTTGTTCTTCAAGGAAACAAGAGGGTCCACTTCATTAAATGTATCCTGTTTG  739

Query  727  --------------------------------------------------------------------------  726
                                                                                      
Sbjct  740  CCTCTTTTACTGCAGCCATTCACTGGGCTGGTGGCTTCAAGGATTTTTCTACAATAACCCCTAAGCCCCTTTCC  813

Query  727  TGGAATGAGGTGACCAAGCTGAAATTTGAAGGAAAGACTTTCTATTTATACGTAAGTCAGAAAGAGGAAAAGAA  800
            ||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||
Sbjct  814  TGGAATGAGGTGACCAAGCTGAAATTTGAAGGAAAGACTTTCTATTTATATGTAAGTCAGAAAGAGGAAAAAAA  887

Query  801  AATTATTCTTACATATTTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAG  874
            .||||||||.|||||||||||.||||||||.|||||.||.|||||||||||||||||||||||.||||||||||
Sbjct  888  GATTATTCTCACATATTTTGCCCCAACTCCAGAAGCCTGCAAGCACCTCTGGAAATGTGGAATTGAGAACCAAG  961

Query  875  CCTTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCTTTAAAGGGAGCCGG  948
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||||.|||||||||
Sbjct  962  CCTTCTACAAGCTGGAAAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCAATTTGTTCTTTAAGGGGAGCCGG  1035

Query  949  TTCCGATACAGTGGCCGAGTTGCAAAGGAAGTCATGGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGAAAT  1022
            |||||||||||||||||.||.|||||||||||.|||||.||.|||||.|||||||||||||||||.||.|||||
Sbjct 1036  TTCCGATACAGTGGCCGGGTCGCAAAGGAAGTAATGGAGTCCAGTGCCAAGATCAAACGGGAGCCGCCAGAAAT  1109

Query 1023  ACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCA  1096
            ||||||||||||||||||.||.|||||.||||||||.||.|||||||||||||||.|.||||||||||||||||
Sbjct 1110  ACACAGAGCAGGGATGGTCCCTAGCCGCAGCTGTCCTTCTATAACCCATGGCCCACGACTGAGCAGCGTCCCCA  1183

Query 1097  GGACCCGCAGAAGAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACA  1170
            ||||.||.|||||||||||.||||||||.||||||||||||||.|||||..||||.|||||||||||||||||.
Sbjct 1184  GGACACGAAGAAGAGCTGTGCACATCTCTATCATGGAAGGCCTTGAGTCGCTACGAGACAGTGCCCATTCCACC  1257

Query 1171  CCAGTGCGTTCCACTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGCG  1244
            ||||||||.|||.||||||||||||||||||||||||||||||||||||||||||||.||||.||||||||.||
Sbjct 1258  CCAGTGCGGTCCTCTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGGCAGACAGCAATGAACG  1331

Query 1245  AGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTGTGGCTGAGCACAGCC  1318
            .||.||||||||.||.||.||||||||||||||.||||||||.|||||||||||||||||.||.||||||||||
Sbjct 1332  TGTCGCTGTGATAGCGGATGAGGCCTACAGCCCCGCAGACAGTGTGCTGCCCACCCCTGTAGCCGAGCACAGCC  1405

Query 1319  TGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCC  1392
            |||||||||||.||||.||||||||||||||.||.|||||.|||||||||||||||||||||||.||.||.|||
Sbjct 1406  TGGAGCTGATGCTGCTCTCCCGGCAGATCAACGGGGCCACGTGCAGCATTGAGGAGGAGAAGGAGTCGGAGGCC  1479

Query 1393  AGCACCCCAACTGCTACAGAGGTGGAGGCCCTTGGGGGAGAGCTGAGGGCCCTGTGTCAGGGGCACAGCGGGCC  1466
            ||||||||.|||||.|||||||.|||||||||.||.||||||||||||||||||||||||||||||.|||||.|
Sbjct 1480  AGCACCCCGACTGCGACAGAGGCGGAGGCCCTGGGAGGAGAGCTGAGGGCCCTGTGTCAGGGGCACGGCGGGTC  1553

Query 1467  CGAGGAGGAACAG---GTGAATAAGTTTGTTCT-AAGTGTCCTCCGTTTGCTCCTTGTGACCA-----------  1525
            .|||.|.||||||   |||.|         ||| |||.|.||.|    .|||.|     |.||           
Sbjct 1554  AGAGCAAGAACAGAGAGTGCA---------TCTGAAGGGACCAC----AGCTAC-----AGCAGCAGCAGTGGA  1609

Query 1526  -----TGGGACTCCT-----CTTTGTTTTGCTCCTCCTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGC  1589
                 ||||| .|||     ||||                                                  
Sbjct 1610  AGGGGTGGGA-ACCTCAAGACTTT--------------------------------------------------  1632

Query 1590  CTTTTTCCGTGATATCCGCCAGACCCCCGAGTTTGAACAATTCCACTATCAATACTTTTGTCCCCTCAGGCGAT  1663
                                                                                      
Sbjct 1633  --------------------------------------------------------------------------  1632

Query 1664  GGTTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTCATTGACACC  1710
                                                           
Sbjct 1633  -----------------------------------------------  1632

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