Nucleotide Global Alignment
Description
- Query:
- TRCN0000489302
- Subject:
- XR_001744804.1
- Aligned Length:
- 5659
- Identities:
- 1859
- Gaps:
- 3763
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTTAAAACCGGTGTATGCCACTTCACAGCATTTGCACTTCGACCGAGAGCAGCCCTGTCTTTTGCCTGAGGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCTCACAATGGAGTTGCCATTGTCAGCAAACAATTAGAGTGCCCGCTTTTAGGGGGCCAGCTGAGAGGTTGTA 148
Query 1 ----------------------------------------------ATG-----GAGTCGCCAACCAA---GGA 20
||| .|||.||.||..|| |||
Sbjct 149 TTTGCTGTGGGAAACCCTGGGCTTTGGAGTCACACGCAGATTTATCATGCCCATTAGTTGCAAATGAAGCTGGA 222
Query 21 GATTGAAGAATTTGAGAGC-------------------------------AACTCTCT---GAAATACCTGCAA 60
|| .||||||...|||.| ||||.||| |||.|.||| ||.
Sbjct 223 GA--CAAGAATGCCAGACCACTGGCCCGCTTCTCTCGGTCTAAGTCACAGAACTGTCTGTGGAACTCCCT-CAT 293
Query 61 CCGGA-------ACAG--------ATCGAGAA------------AATCTG-------GCTTCGGCTCC--GCGG 98
| || |||| |..||||| ||| || .|.|||.|.|| |.||
Sbjct 294 C--GATGGGCTCACAGGGAATGTCAAGGAGAAGCCAAGGCCAACAAT-TGTCCATGACCCTCGACCCCCAGAGG 364
Query 99 --------GCTGAGGAAAT-----------ATA---------------AGAAAACGTCCCAGAGATTACGGTCT 138
|||||.|||.| ||| .|||.||.|||...||||||||||||
Sbjct 365 AGATCCTAGCTGATGAATTGCCACAGCTGGATAGCCCAGAAGTCTTGGTGAAGACATCCTTCAGATTACGGTCT 438
Query 139 TTGGTCAAACAATTAGAGAGAGGGGAAGCTTCAGTGGTAGATCTTAAGAAGAATTTGGAATATGCAGCCACAGT 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 TTGGTCAAACAATTAGAGAGAGGGGAAGCTTCAGTGGTAGATCTTAAGAAGAATTTGGAATATGCAGCCACAGT 512
Query 213 GCTTGAATCTGTGTATATTGATGAAACAAGGAGACTCCTGGATACAGAGGATGAGCTCAGTGACATTCAGTCAG 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 GCTTGAATCTGTGTATATTGATGAAACAAGGAGACTCCTGGATACAGAGGATGAGCTCAGTGACATTCAGTCAG 586
Query 287 ATGCTGTGCCTTCTGAGGTCCGAGACTGGCTGGCCTCCACCTTCACGCGGCAGATGGGGATGATGCTCAGGAGG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 ATGCTGTGCCTTCTGAGGTCCGAGACTGGCTGGCCTCCACCTTCACGCGGCAGATGGGGATGATGCTCAGGAGG 660
Query 361 AGCGACGAGAAGCCCCGGTTCAAGAGCATCGTTCACGCAGTGCAGGCTGGGATATTTGTGGAGAGAATGTATAG 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AGCGACGAGAAGCCCCGGTTCAAGAGCATCGTTCACGCAGTGCAGGCTGGGATATTTGTGGAGAGAATGTATAG 734
Query 435 ACGGACATCAAACATGGTTGGACTGAGCTATCCACCAGCTGTTATTGAGGCATTAAAGGATGTGGACAAGTGGT 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 ACGGACATCAAACATGGTTGGACTGAGCTATCCACCAGCTGTTATTGAGGCATTAAAGGATGTGGACAAGTGGT 808
Query 509 CATTTGACGTCTTTTCCCTCAATGAGGCCAGTGGGGATCATGCACTGAAATTTATTTTCTATGAACTACTCACA 582
|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 CCTTTGACGTCTTTTCCCTCAATGAGGCCAGTGGGGATCATGCACTGAAATTTATTTTCTATGAACTACTCACA 882
Query 583 CGTTATGATCTGATCAGCCGTTTCAAGATCCCCATTTCTGCACTTGTCTCATTTGTGGAGGCCCTGGAAGTGGG 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 CGTTATGATCTGATCAGCCGTTTCAAGATCCCCATTTCTGCACTTGTCTCATTTGTGGAGGCCCTGGAAGTGGG 956
Query 657 ATACAGCAAGCACAAAAATCCTTACCATAACTTAATGCACGCTGCCGATGTTACACAGACAGTGCATTACCTCC 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 ATACAGCAAGCACAAAAATCCTTACCATAACTTAATGCACGCTGCCGATGTTACACAGACAGTGCATTACCTCC 1030
Query 731 TCTATAAGACAGGAGTGGCGAACTGGCTGACGGAGCTGGAGATCTTTGCTATAATCTTCTCAGCTGCCATCCAT 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 TCTATAAGACAGGAGTGGCGAACTGGCTGACGGAGCTGGAGATCTTTGCTATAATCTTCTCAGCTGCCATCCAT 1104
Query 805 GACTACGAGCATACCGGAACCACCAACAATTTCCACATTCAGACTCGGTCTGATCCAGCTATTCTGTATAATGA 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 GACTACGAGCATACCGGAACCACCAACAATTTCCACATTCAGACTCGGTCTGATCCAGCTATTCTGTATAATGA 1178
Query 879 CAGATCTGTACTGGAGAATCACCATTTAAGTGCAGCTTATCGCCTTCTGCAAGATGACGAGGAAATGAATATTT 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 CAGATCTGTACTGGAGAATCACCATTTAAGTGCAGCTTATCGCCTTCTGCAAGATGACGAGGAAATGAATATTT 1252
Query 953 TGATTAACCTCTCAAAGGATGACTGGAGGGAGTTTCGAACCTTGGTAATTGAAATGGTGATGGCCACAGATATG 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1253 TGATTAACCTCTCAAAGGATGACTGGAGGGAGTTTCGAACCTTGGTAATTGAAATGGTGATGGCCACAGATATG 1326
Query 1027 TCTTGTCACTTCCAACAAATCAAAGCAATGAAGACTGCTCTGCAGCAGCCAGAAGCCATTGAAAAGCCAAAAGC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1327 TCTTGTCACTTCCAACAAATCAAAGCAATGAAGACTGCTCTGCAGCAGCCAGAAGCCATTGAAAAGCCAAAAGC 1400
Query 1101 CTTATCCCTTATGCTGCATACAGCAGATATTAGCCATCCAGCAAAAGCATGGGACCTCCATCATCGCTGGACAA 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1401 CTTATCCCTTATGCTGCATACAGCAGATATTAGCCATCCAGCAAAAGCATGGGACCTCCATCATCGCTGGACAA 1474
Query 1175 TGTCACTCCTGGAGGAGTTCTTCAGACAGGGTGACAGAGAAGCAGAGCTGGGGCTGCCTTTTTCTCCTCTGTGT 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1475 TGTCACTCCTGGAGGAGTTCTTCAGACAGGGTGACAGAGAAGCAGAGCTGGGGCTGCCTTTTTCTCCTCTGTGT 1548
Query 1249 GACCGAAAGTCCACTATGGTTGCTCAGTCACAAGTAGGTTTCATTGATTTCATCGTGGAACCCACCTTCACTGT 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1549 GACCGAAAGTCCACTATGGTTGCTCAGTCACAAGTAGGTTTCATTGATTTCATCGTGGAACCCACCTTCACTGT 1622
Query 1323 GCTTACGGACATGACCGAGAAGATTGTGAGTCCATTAATCGATGAAACCTCTCAAACTGGTGGGACAGGACAGA 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 GCTTACGGACATGACCGAGAAGATTGTGAGTCCATTAATCGATGAAACCTCTCAAACTGGTGGGACAGGACAGA 1696
Query 1397 GGCGTTCGAGTTTGAATAGCATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGAGGGA 1470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1697 GGCGTTCGAGTTTGAATAGCATCAGCTCGTCAGATGCCAAGCGATCAGGTGTCAAGACCTCTGGTTCAGAGGGA 1770
Query 1471 AGTGCCCCGATCAACAATTCTGTCATCTCCGTTGACTATAAGAGCTTTAAAGCTACTTGGACGGAAGTGGTGCA 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1771 AGTGCCCCGATCAACAATTCTGTCATCTCCGTTGACTATAAGAGCTTTAAAGCTACTTGGACGGAAGTGGTGCA 1844
Query 1545 CATCAATCGGGAGAGATGGAGGGCCAAGGTACCCAA-------------------------------------- 1580
||||||||||||||||||||||||||||||||||||
Sbjct 1845 CATCAATCGGGAGAGATGGAGGGCCAAGGTACCCAAAGGCATTGCAAGCAGCGATGGCAGCTACTGCATCATCT 1918
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 1919 GCAAAGAAACACTCTCTTATAATCAATTACACTCATTACACTTGAAAATTCAATTTCTGACAACATGCAATTTA 1992
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 1993 AAGAGGTACTTCAAAATAATTTGTTTGCAATTATCTGGCTTACTAAAATTACCTTCAGAAACTAATCACCTGGG 2066
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 2067 GAAGCATTTGACAGTTTCAGGAGAAAACTGGCCCTTTAAAAAGAACAGATAAATAAACAGCTAATAATTTTTAA 2140
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 2141 ATGCATTTGGTATGGGGATAGAGATAACTGTGTGTTTGAACTATTTTGGAAGCACAAAGAAGTTGTCTGTAGCC 2214
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 2215 TTGCTTGGGAGTTTGGGAAGGCATCATGTAGCAGACTTCTGGGATTAAGACCTGAAGGAGGTGTTATATTTAGA 2288
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 2289 AATGGGAACAAGAAGAAAGGGGTTGGGCAAAGGCACAGAGCCTGGTGTTACGGATATCTTGTGGGAGAATAGTT 2362
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 2363 TGGTTATCAGGGCACATTTCAATTAGCAGGGAAGGGGAGAGAGAATTGAGTCTTGACTTGCAAGGTTTTTTTTT 2436
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 2437 TTTTTTTTTGGCAAATTCAGATAGGTTCTTTGAGACTCACTTTGGGGATGATAATGTACATCGCAGAATTGAGG 2510
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 2511 TGAATAGAAGTAATACCTATAAAGCACTGAGAAAGCAGCCTGCACAAGGTTGGTACCTAAGTAGTAGCTGTTAT 2584
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 2585 GTATGCAAATTGGAAAAGAAGGTTAAAGGTTTGAATACGAAGTTAAGGTGGTGGTGAAAATAGCAACCTGTAAC 2658
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 2659 TAATATTTTATAACATTCTTAGCAGCTCAGTAATGCTGTTGACTGGTTGACTGGTGCTAATTAGAAATCTAGTT 2732
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 2733 CGCATCTGTTTTCTGTTGGTGGTGGCTGTTTTGTTTGTTGCTCTTTTTTTCCAGATGACCCTGATTTCAAGAAA 2806
Query 1581 -------------------------------------------------------------------------- 1580
Sbjct 2807 GGCTGTCCTCCGTGGGGCACTTGAACATGTATTGTTAGTAAATGCACTGGAAATGGGTCTTGGTTTTGTTAACC 2880
Query 1581 ------------------AGAGGAGAAGGCCAAGAAGGAAGCAGAGGAAAAGGCTCGCATGGCCGCAGAGGAGC 1636
||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 2881 AACCTGATTTACAAAACTAGAGGAGAAGGCCAAGAAGGAAGCAGAGGAAAAGGCTCGCCTGGCCGCAGAGGAGC 2954
Query 1637 AGCAAAAGGAAATGGAAGCCAAAAGCCAGGCTGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGACGTCTGGA 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2955 AGCAAAAGGAAATGGAAGCCAAAAGCCAGGCTGAAGAAGGCGCATCTGGCAAAGCTGAGAAAAAGACGTCTGGA 3028
Query 1711 GAAACTAAGAATCAAGTCAATGGAACACGGGCAAACAAAAGTGACAACCCTCGTGGGAAAAATTCCAAAGCCGA 1784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 3029 GAAACTAAGAATCAAGTCAATGGAACACGGGCAAACAAAAGTGACAACCCTCGTGGGAAAAACTCCAAAGCCGA 3102
Query 1785 GAAGTCATCAGGAGAACAGCAACAGAATGGTGACTTCAAAGATGGTAAAAATAAGACAGACAAGAAGGATCACT 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3103 GAAGTCATCAGGAGAACAGCAACAGAATGGTGACTTCAAAGATGGTAAAAATAAGACAGACAAGAAGGATCACT 3176
Query 1859 CTAACATCGGAAATGATTCAAAGAAAACAGATGATTCACAAGAG------------------------------ 1902
|||||||||||||||||||||||||||||||||...||.||.||
Sbjct 3177 CTAACATCGGAAATGATTCAAAGAAAACAGATGGCACAAAACAGCGTTCTCACGGCTCACCAGCCCCAAGCACC 3250
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3251 AGCTCCACGTGTCGCCTTACGTTGCCAGTCATCAAGCCTCCTTTGCGTCATTTTAAACGCCCTGCTTACGCATC 3324
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3325 TAGCTCCTATGCACCTTCAGTCTCAAAGAAAACTGATGAGCATCCTGCAAGGTACAAGATGCTGGATCAGAGGA 3398
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3399 TCAAAATGAAAAAGATTCAGAACATCTCACATAACTGGAACAGAAAATAGGCCGAGGGGAAGAAGAGAGGGAGT 3472
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3473 GAAGGAGGGTCTACCTATCTGCTTCTCAGCACCCACTGGCCACAGCAGGACACACCTCCAAGACCCTTGGAGGC 3546
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3547 TGTTGGAGCAGGTACTATCCTGGTTGACTCCACCAAGGTGAAATGAAAGTTGTATGTGATTTTCCTCTTTGTTG 3620
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3621 TTCTTGTATAGACTTTTCAATTGCTGTATGTGGGATCAGCCCAGACGCCAGCAACAAACTAGCAAGAGGGGTGT 3694
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3695 TTTTATGGTATAAGTCTCTAAAAGTCTAAATTGGACCAAAATTAAAATGACACAAACTTAAAAAAAAATAAAAT 3768
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3769 TCCTCTCATTGCCACTTTTTTCAATCTCTAAAAGTTAGTTGCCCCCAAAAGAATATTGGTTTAATAATCATCAT 3842
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3843 ATTTAAGAAATGCACTGATAAAAACATATTTTCCAATTTTAAATACACCTATTTAAAATGTAAATACACTTATT 3916
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3917 TAAAATTCAAGTAAATATGTAACTATCAAAGTAAATGTATTCAAAACAGAAGTTGTGCTTCTGAATGTAAAAAT 3990
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 3991 ATTAAAAGGAAGAGAAGACGGATGAATTGTTGTATTCATGGACATTTCAGAATTCACGCTTATAAAGCAAATCC 4064
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4065 AAGTTAAAAAACAAAAAAAGATTTTTGTGCCTCATGAAGATTGTGCCTCATGCCCAATAACCTCATGTACTTTG 4138
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4139 AAGGATGTGAAGGTTTGCAAGAGATGCATTTGGCTTCATTTTCCTCTAATCTTTTACTTCTACCCACAGTAGAT 4212
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4213 GATACAAAAAATCTTGCCTTAAAGACTGCAGGTTTAAGAGTCATTGCAAAAGATGTCAGTTTGATTTTGTGGTC 4286
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4287 CTAGGCCAAGAGGGTGTAAAATTCTGAGCCTAGTTTAAATTCTTTATTTTCAGATTGTTCTGGACTGAAAATAA 4360
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4361 AGAATTTAAACTAGGCTAGAGATGCCTTTAAGTTACATTTCAGATCCTCTTCACAGCACGCTACATATCTAAAG 4434
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4435 CCCTTGAGATCCTGATTGTTCTCACAGTTGTTGGTGGAATCCATAGTTTTATAACTCACCTCTTTTTATGGTGG 4508
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4509 CATTGTTAGCCCTTCTGTGTCTCTCCCTAGGATTTTTAATTCAGGACTAAAATCACAGAAGTAGCAAGGAAAGG 4582
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4583 CTCAAGACTAGAGATAGCTTTCAATCTCTTCAGAAATAGCCTGGTGCAGTGAGAAAACTAGGTTTGTTTTCAGG 4656
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4657 CCAGTCTGATCTTCATCCTATTCTGTCTATAACTAGTTGCAGGTCCTTGCTCGGATGGCATAATTTTTTGATGC 4730
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4731 CTCCATTTGCTTAACTAGAAACTAGGATTCATATACACACTCTGCACTTTGTATTGAAGATTAATGATAATGTA 4804
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4805 GGTTTTGGTTGCTGTGGCTGAGCCTGGCCAGTAATAGGTGCATAACAGAAGTAGCTAAGAGCATTTCATAATCA 4878
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4879 GGATGAACTCTCCAGGACAGCCCTACAAAGAAGGAGCTGTTTGTTCCCGGATGGCCTCGACCTTCCAGGCTTGA 4952
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 4953 TTGTAAAGAGTTTAGTGTCCTCTCCTTCTCTCATTCCCTGCAGTTCATTTCCAATAAACTGCAGTTATTCAAGT 5026
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 5027 TGAGCAAGTTCCGGAATTTAGTGCCTACCATGCTATTGGGCAGTTTATTTATAATGTGCTTTATGATGATACTT 5100
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 5101 CAGAGAAATTTAATTGCTATACAAAAAGACGAATCATTGTGACTTTTCGTTAAGGAGGCGATTGCAATTCTTTG 5174
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 5175 CTCCCTGCCTGGTGTCTGGGTTAGAAGGCCCTTCTGCAGGCTGGTAGTGTCTGTTCCACCTGGATTAGGTTAAC 5248
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 5249 TCAACAGGTAATTCCTATCTGTTTATACACAGATGCTTTAGCGCTTGCTGTACAAAGTCATTTGGCTACACACT 5322
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 5323 GAGGAGGCCCATGGGAGTAGTAGCCTCCTCAAATAATGTTCCCTACCTATCTGTCAATACCTTCCATCTTAGGT 5396
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 5397 ATTGAGAATTTAATGAGGCTGTGTTTTCTTGGCTGTGCTTCTTGATGTTGGAAGCCATGTTCCTGGGGAACAAA 5470
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 5471 TCTGTATTCTTTTCTCCTAAGATGTGAGTTTTTTTCAACCTTTGCTAATATTTTAATGGAGCAAATGTACAGAT 5544
Query 1903 -------------------------------------------------------------------------- 1902
Sbjct 5545 GTTGAGATTTTGCACTGCTTATAAAATGCCTACCATGTTTTTTGCATAATGGATTGTATAGAAATGCAGATTAT 5618
Query 1903 ----------------------------------- 1902
Sbjct 5619 ATTCTTACAGCAAATAAAAAGATGCTTTTAACAGA 5653
