Nucleotide Global Alignment

Description

Query:
TRCN0000489348
Subject:
XM_006532407.3
Aligned Length:
1244
Identities:
966
Gaps:
136

Alignment

Query    1  ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA  74
            ||||||||.||.|||||||||||.||....||||||||.||.|||||                        |||
Sbjct    1  ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA  50

Query   75  TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGC----------------------  126
            |         |||||..|||.||||||||||||.||.||||.||||..||||                      
Sbjct   51  T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAAAAGAGTCTCCCCCACAGC  115

Query  127  ------------------------------------------------------------------CTGAAAGC  134
                                                                              ||| ||||
Sbjct  116  CCCCCGCCGATGATGGAGCGGAGGAACCAGGGTCGGAGACCTCCGATGCTAAGAGCACTCCAACTGCTG-AAGC  188

Query  135  TGAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCCAAGCTCGCATGG  208
            .||||||||||||||.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.||||||||..|||
Sbjct  189  CGAAGAAGCAGGCATCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTCAAGCTCGTGTGG  262

Query  209  TCAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGGGGGCTGATGGTAAAA------CGAAG  276
            .|      |||||||||.||||.||||..||.||.||.|||||||||||.||||||||.||||      |||||
Sbjct  263  CC------AGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGGGCGCTGATGGCAAAACCGGGGCGAAG  330

Query  277  ATCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGATTCCAGCAAAAAC  350
            |||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||.||.||.||.||
Sbjct  331  ATCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGATCCCGGCCAAGAC  404

Query  351  CCCGCCC-GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGCGGCTACAGCAGC  423
            |.||||| || ||.|||||.||.||..|.||.||||||||.||||||||.||.||.||.|||||||||||||||
Sbjct  405  CACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGGTGAACCACCAAAATCCGGAGAACGAAGCGGCTACAGCAGC  477

Query  424  CCCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCACCCGGGAGCCCAA  497
            ||||||||.||.||.||.||.|||||.|||||.||||||||.|||||.|||||.||.|||||||||||||||||
Sbjct  478  CCCGGCTCTCCCGGAACGCCTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCACCCGGGAGCCCAA  551

Query  498  GAAGGTGGCAGTGGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGC  571
            ||||||||||||||||||.|||||.||.|||||.||.||..|....|||||||||||||||||.|||||.||||
Sbjct  552  GAAGGTGGCAGTGGTCCGCACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGACTGCCCCTGTGC  625

Query  572  CCATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAGCCGGGAGGCGGG  645
            |||||||||||||.||||||||||.|||.|||||.|||||.|||||||||||||||||||||||.|||||.||.
Sbjct  626  CCATGCCAGACCTAAAGAATGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAGCCAGGAGGTGGC  699

Query  646  AAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAA  719
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  700  AAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCGAAGGATAATATCAA  773

Query  720  ACACGTCCTGGGAGGCGGCAGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTG  793
            ||||||||.|||.||.|||||||||||||||||||||||.||.||.|||||||||||.||||||||||||||||
Sbjct  774  ACACGTCCCGGGTGGAGGCAGTGTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGACCTCCAAGTGTG  847

Query  794  GCTCATTAGGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAG  867
            ||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||||.|||||||||
Sbjct  848  GCTCGTTAGGGAACATCCATCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAGCTGGACTTCAAG  921

Query  868  GACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGA  941
            |||||||||||||||||||||||.|||.||||.||||||||||||||||||||.|||||.|||||.||||||||
Sbjct  922  GACAGAGTCCAGTCGAAGATTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAATAAGAAGATTGA  995

Query  942  AACCCACAAGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGC  1015
            |||||||||||||||||||.|.|||||.||||||||||||||||||||.||.||.||.||.|||||.|||||.|
Sbjct  996  AACCCACAAGCTGACCTTCAGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTGTGTATAAGTCAC  1069

Query 1016  CAGTGGTGTCTGGGGACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTAGAC  1089
            |.|||||||||||||||||.|||||||||||.|||||||||||.||.|||||.|||||||||||||||||.|||
Sbjct 1070  CCGTGGTGTCTGGGGACACATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATCGACATGGTGGAC  1143

Query 1090  TCGCCCCAGCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTG  1149
            ||.||.|||||.|||||.|||||.||.||.||||||||.|||.|||||||||||||||||
Sbjct 1144  TCACCACAGCTTGCCACACTAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGTTTG  1203

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