Nucleotide Global Alignment
Description
- Query:
- TRCN0000489350
- Subject:
- NM_001282961.1
- Aligned Length:
- 2463
- Identities:
- 928
- Gaps:
- 1419
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCGCCCTGGCTGAAGTGGCATGGACCCGCCATGGCGCGGCTCTGGGGCTTATGCCTGCTGGTCTTGGGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGGAGGGCCTCTCTCGCCTGCCCGACGTCCTGCAAATGCAGTTCCGCTAGGATTTGGTGTACTGAGCCTTCTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGCATCGTGGCATTCCCGAGGTTGGAACCTAACAGCGTTGACCCGGAGAACATCACGGAAATTCTCATTGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACCAGAAAAGGCTAGAAATCATCAATGAAGATGACGTTGAAGCTTACGTGGGGCTGAGAAACCTTACAATTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGATTCCGGCTTAAAGTTTGTGGCTTACAAAGCGTTTCTGAAAAACAGCAACCTGCGGCACATAAATTTCACAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAACAAGCTGACGAGTTTGTCCAGGAGACATTTCCGCCACCTTGACTTGTCTGACCTGATCCTGACGGGTAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGTTCACGTGCTCCTGCGACATCATGTGGCTCAAGACTCTCCAGGAGACTAAATCCAGCCCCGACACTCAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTGTACTGCCTCAATGAGAGCAGCAAGAACATGCCCCTGGCGAACCTGCAGATACCCAATTGTGGTCTGCCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGCACGTCTGGCTGCTCCTAACCTCACCGTGGAGGAAGGAAAGTCTGTGACCCTTTCCTGCAGTGTGGGGGGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACCCACTCCCCACCTTGTACTGGGACGTTGGGAATTTGGTTTCCAAGCACATGAATGAAACAAGCCACACACA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGCTCCTTAAGGATAACGAACATTTCATCTGATGACAGTGGAAAGCAAATCTCTTGTGTGGCAGAAAACCTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAGGAGAAGATCAAGATTCTGTGAACCTCACTGTGCATTTTGCGCCAACTATCACGTTTCTCGAGTCTCCAACC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGATCACCACTGGTGCATTCCATTCACTGTGAGAGGCAACCCCAAGCCTGCGCTTCAGTGGTTCTACAATGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGCCATACTGAATGAGTCCAAGTACATCTGTACTAAGATCCACGTCACCAATCACACGGAGTACCATGGCTGCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCAGCTGGATAACCCCACTCATATGAATAACGGAGACTACACCCTGATGGCCAAGAACGAGTATGGGAAGGAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGAGACAGATCTCCGCTCACTTCATGGGCCGGCCTGGAGTCGACTACGAGACAAACCCAAATTACCCTGAAGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCTCTATGAAGACTGGACCACGCCAACTGACATTGGGGATACTACGAACAAAAGTAATGAAATCCCCTCCACGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGTTGCTGACCAAAGCAATCGGGAGCATCTCTCGGTCTATGCCGTGGTGGTGATTGCATCTGTGGTGGGATTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCCTGCTGGTGATGTTGCTCCTGCTCAAGTTGGCGAGACATTCCAAGTTTGGCATGAAAGGCCCAGCTTCGGT 1406
Query 1 --------ATGATGATGACTCTGCCAGCCCACTCCATCACATCTCCAATGGGAGTAACACTCCATCTTCTTCGG 66
|.||.|||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||||
Sbjct 1407 CATCAGCAACGACGATGACTCTGCCAGCCCCCTCCACCACATCTCCAATGGGAGTAACACTCCATCTTCTTCGG 1480
Query 67 AAGGTGGCCCAGATGCTGTCATTATTGGAATGACCAAGATCCCTGTCATTGAAAATCCCCAGTACTTTGGCATC 140
|.||.||.||.||.||||||||||||||||||||||||||.|||||.||||||||.||||||||||||||||||
Sbjct 1481 AGGGCGGTCCCGACGCTGTCATTATTGGAATGACCAAGATTCCTGTTATTGAAAACCCCCAGTACTTTGGCATC 1554
Query 141 ACCAACAGTCAGCTCAAGCCAGACACATTTGTTCAGCACATCAAGCGACATAACATTGTTCTGAAAAGGGAGCT 214
||||||||||||||||||||||||||||||||||||||.||||||.||||.|||||.||||||||.|||||.||
Sbjct 1555 ACCAACAGTCAGCTCAAGCCAGACACATTTGTTCAGCATATCAAGAGACACAACATCGTTCTGAAGAGGGAACT 1628
Query 215 AGGCGAAGGAGCCTTTGGAAAAGTGTTCCTAGCTGAATGCTATAACCTCTGTCCTGAGCAGGACAAGATCTTGG 288
.||.|||||||||||.||.|||||.|||||.||.||.|||||.||||||||.||.||||||||.||||||.|||
Sbjct 1629 TGGGGAAGGAGCCTTCGGGAAAGTTTTCCTTGCCGAGTGCTACAACCTCTGCCCAGAGCAGGATAAGATCCTGG 1702
Query 289 TGGCAGTGAAGACCCTGAAGGATGCCAGTGACAATGCACGCAAGGACTTCCACCGTGAGGCCGAGCTCCTGACC 362
||||.||||||||.||||||||.|||||.||||||||||||||||||||.||.||.||.||.|||||.||||||
Sbjct 1703 TGGCTGTGAAGACGCTGAAGGACGCCAGCGACAATGCACGCAAGGACTTTCATCGGGAAGCTGAGCTGCTGACC 1776
Query 363 AACCTCCAGCATGAGCACATCGTCAAGTTCTATGGCGTCTGCGTGGAGGGCGACCCCCTCATCATGGTCTTTGA 436
|||||||||||.||||||||.|||||||||||.||.|||||.||||||||||||||.|||||||||||||||||
Sbjct 1777 AACCTCCAGCACGAGCACATTGTCAAGTTCTACGGTGTCTGTGTGGAGGGCGACCCACTCATCATGGTCTTTGA 1850
Query 437 GTACATGAAGCATGGGGACCTCAACAAGTTCCTCAGGGCACACGGCCCTGATGCCGTGCTGATGGCTGAGGGCA 510
||||||||||||.||||||||||||||||||||.|||||||||||.||.||.||.|||||||||||.|||||.|
Sbjct 1851 GTACATGAAGCACGGGGACCTCAACAAGTTCCTTAGGGCACACGGGCCCGACGCAGTGCTGATGGCAGAGGGTA 1924
Query 511 ACCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCATATAGCCCAGCAGATCGCCGCGGGCATGGTCTACCTG 584
||||||||||.||.|||||||||||||||||||||||.||.||.|||||.|||||.||.||.||||||||||||
Sbjct 1925 ACCCGCCCACAGAGCTGACGCAGTCGCAGATGCTGCACATCGCTCAGCAAATCGCAGCAGGTATGGTCTACCTG 1998
Query 585 GCGTCCCAGCACTTCGTGCACCGCGATTTGGCCACCAGGAACTGCCTGGTCGGGGAGAACTTGCTGGTGAAAAT 658
||||||||.|||||.||||||||.||..||||||||.|||||||||||||.||.||||||.|||||||||||||
Sbjct 1999 GCGTCCCAACACTTTGTGCACCGTGACCTGGCCACCCGGAACTGCCTGGTGGGAGAGAACCTGCTGGTGAAAAT 2072
Query 659 CGGGGACTTTGGGATGTCCCGGGACGTGTACAGCACTGACTACTACAGGGTCGGTGGCCACACAATGCTGCCCA 732
.||||||||||||||||||||.||.|||||||||||.||||||||..||||||||||||||||||||.||||||
Sbjct 2073 TGGGGACTTTGGGATGTCCCGAGATGTGTACAGCACCGACTACTATCGGGTCGGTGGCCACACAATGTTGCCCA 2146
Query 733 TTCGCTGGATGCCTCCAGAGAGCATCATGTACAGGAAATTCACGACGGAAAGCGACGTCTGGAGCCTGGGGGTC 806
|.||.||||||||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||.||.
Sbjct 2147 TCCGATGGATGCCTCCAGAGAGCATCATGTACAGGAAATTCACCACCGAGAGCGACGTCTGGAGCCTGGGCGTT 2220
Query 807 GTGTTGTGGGAGATTTTCACCTATGGCAAACAGCCCTGGTACCAGCTGTCAAACAATGAGGTGATAGAGTGTAT 880
||||||||||||||.||||||||.|||||.|||||||||||.|||||.||.||||||||||||||||||||.||
Sbjct 2221 GTGTTGTGGGAGATCTTCACCTACGGCAAGCAGCCCTGGTATCAGCTATCGAACAATGAGGTGATAGAGTGCAT 2294
Query 881 CACTCAGGGCCGAGTCCTGCAGCGACCCCGCACGTGCCCCCAGGAGGTGTATGAGCTGATGCTGGGGTGCTGGC 954
|||.|||||..|||||||.|||||.||.||.|||||.||||||||||||||||||||.|||||.||.|||||||
Sbjct 2295 CACCCAGGGAAGAGTCCTTCAGCGGCCTCGAACGTGTCCCCAGGAGGTGTATGAGCTCATGCTTGGATGCTGGC 2368
Query 955 AGCGAGAGCCCCACATGAGGAAGAACATCAAGGGCATCCATACCCTCCTTCAGAACTTGGCCAAGGCATCTCCG 1028
||||.||.||.||||...||||||||||||||.|||||||.||||||||||||||||||||||||||||||||.
Sbjct 2369 AGCGGGAACCACACACCCGGAAGAACATCAAGAGCATCCACACCCTCCTTCAGAACTTGGCCAAGGCATCTCCC 2442
Query 1029 GTCTACCTGGACATTC----- 1044
|||||||||||.||.|
Sbjct 2443 GTCTACCTGGATATCCTAGGC 2463
