Nucleotide Global Alignment

Description

Query:
TRCN0000489374
Subject:
NM_001286809.1
Aligned Length:
1442
Identities:
509
Gaps:
882

Alignment

Query    1  ATGGCCACCATCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGTGGTGCGAAGGTGTGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAAGCTGT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTGTTTGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCTGTGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGCTCAAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTGGGTT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  TGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCTGTGGG  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  CTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCCTGTAC  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  CAGCAGATCAAAGCCGGCGCCTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGGATCT  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  GATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCCGAAGCCCTTAAGCACCCCTGGATCT  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  CGCACCGCTCCACCGTGGCATCCTG--CATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATGCCA  886
                               ||.|||  |.|.|.||..|.|..|.||.|||  |||||            ||||.
Sbjct    1  -------------------ATGCTGCTCTTTCTCACGCTGTGGGCCCTGG--TGCCT------------TGCCT  41

Query  887  GGAGGAAACTGAAGGGAGCCATT-CTCACC----ACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAGTG  955
            ||.|                 || ||.|||    || .|.||..||.|||         |.|||||||||||.|
Sbjct   42  GGTG-----------------TTGCTAACCCTCTAC-TTTCTCTCCTCCA---------CAGGAGGGAAGAGCG  88

Query  956  GGGGAAACAAGAAGAGCGATGGTGTGAAGGAATCCTCAGAGAGCACCAACACCACCATCGAGGATGAAGACACC  1029
            |.|||||||||||||.||||||||||||||||||.||.||||||||||||||||||||.|||||.|||||||||
Sbjct   89  GAGGAAACAAGAAGAACGATGGTGTGAAGGAATCTTCTGAGAGCACCAACACCACCATTGAGGACGAAGACACC  162

Query 1030  AAAGTGCGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGAGTC  1103
            ||||||||.||||||||||||||.||||||||||||||||||||.||||||||||||||||||||.||||||||
Sbjct  163  AAAGTGCGCAAACAGGAAATTATCAAAGTGACAGAGCAGCTGATCGAAGCCATAAGCAATGGAGACTTTGAGTC  236

Query 1104  CTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTGG  1177
            ||||||||||||||||||||||||.|||||||||||.|||||.||||||||||||||||||||.||||||||||
Sbjct  237  CTACACGAAGATGTGCGACCCTGGAATGACAGCCTTTGAACCAGAGGCCCTGGGGAACCTGGTGGAGGGCCTGG  310

Query 1178  ACTTCCATCGATTCTATTTTGAAAACCTGTGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAATCCC  1251
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.
Sbjct  311  ACTTTCATCGATTCTATTTTGAAAACCTGTGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAACCCT  384

Query 1252  CACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGCTGGCGG  1325
            |||||||||||||||||.|||||||||||||||||||||||.|||||||||||.|||||||||||.||.|||||
Sbjct  385  CACATCCACCTGATGGGTGACGAGTCAGCCTGCATCGCCTATATCCGCATCACTCAGTACCTGGATGCAGGCGG  458

Query 1326  CATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATCGTCCACT  1399
            |||.||.|||||.||||||||.|||||||||||.||||||||||||.|||||||||||||||||||||||||||
Sbjct  459  CATACCCCGCACGGCCCAGTCAGAGGAGACCCGCGTCTGGCACCGCAGGGACGGCAAATGGCAGATCGTCCACT  532

Query 1400  TCCACAGATCTGGGGCGCCCTCCGTCCTGCCCCACG  1435
            |||||||||||||||||||||||||||||||.||. 
Sbjct  533  TCCACAGATCTGGGGCGCCCTCCGTCCTGCCGCAT-  567

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