Nucleotide Global Alignment

Description

• Query: TRCN0000489374
• Subject: NM_172084.3
• Aligned Length: 1451
• Identities: 1095
• Gaps: 120

Alignment

Query    1  ATGGCCACCA---TCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGA-ATTGGGCAAGGGAGCCT  70
            ||||||||||   |.|||||||||||||||||.||.|||||||||||||.|||||| ||| ||||||||.||.|
Sbjct    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATT-GGCAAGGGGGCTT  73

Query   71  TCTCGGTGGTGCGAAGGTGTGTGAAGGTGCTG-GCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAA  143
            ||||.|||||.|||.|.|||||.|||.| ||| .|.|||||.||||||||.|||||||||||||||||.|||||
Sbjct   74  TCTCTGTGGTCCGACGCTGTGTCAAGCT-CTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAA  146

Query  144  GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCG  217
            |||||||||||||||.||.||||||||||||.|.||.||.||.|||||||||||.||||||||..|||||||||
Sbjct  147  GCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCG  220

Query  218  TCCGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTG  291
            |.||.||.||.|||||||||||.||||||||...||||||||||.|||||||.|||||||||||||||||.||.
Sbjct  221  TGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTC  294

Query  292  TTTGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC  365
            ||||||||.||.|||||..|.|||||.|||||.|||||.|||||||||||||||||||||||||||||||||||
Sbjct  295  TTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC  368

Query  366  TGTGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGC  439
            .||.||.||.||.|||||.||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||.
Sbjct  369  CGTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGT  442

Query  440  TCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTT  513
            .|||.||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||
Sbjct  443  GCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTT  516

Query  514  GGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCT  587
            ||.||.||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|
Sbjct  517  GGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACAT  590

Query  588  GTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCC  661
            .|||||.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...|
Sbjct  591  CTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGC  664

Query  662  TGTACCAGCAGATCAAAGCCGGCGCCTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAAG  735
            ||||||||||||||||.||.||.||||||||.|||||.||.||.||.||||||||.|||||.||.||||||||.
Sbjct  665  TGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAA  738

Query  736  GATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCCTTAAGCACCCC  807
            .|.||.|||||..|||||||||||||.|||||..||||.|||||||||||  ||  ||.|||||.||||||||.
Sbjct  739  AACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCCG  810

Query  808  TGGATCTCGCACCGCTCCACCGTGGCATCC-TGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCA  880
            |||.|||..||.||||||||.||.|||||| || |||||||||||||||||.|||||.||.|||||.|||||||
Sbjct  811  TGGGTCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCA  883

Query  881  ATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAGT  954
            ||||||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.|||||             
Sbjct  884  ATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTC-------------  944

Query  955  GGGGGAAACAAGAAGAGCGATGGTGTGAAGGAATCCTCAGAGAGCACCAACACCACCATCGAGGATGAAGACAC  1028
                                                                                      
Sbjct  945  --------------------------------------------------------------------------  944

Query 1029  CAAAGTGCGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGAGT  1102
               ||..|||||.|||||.||.||.||....||.||||||||.||.||.|||.|.|.|||.||.||.||||||.
Sbjct  945  ---AGCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGG  1015

Query 1103  CCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTG  1176
            |||||.||||.||.||.|||||.||..||||..|.||.||.|||||.||.|||||.|||||||||||.||..||
Sbjct 1016  CCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATG  1089

Query 1177  GACTTCCATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAATC  1249
            ||||||||..|||||||.||.||.|||||| ||| ||..||||||||||||..|.|||||.|||||||||||.|
Sbjct 1090  GACTTCCACAGATTCTACTTCGAGAACCTGCTGG-CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACC  1162

Query 1250  CCCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGCTGGC  1323
            |.|||.|.|||.|.||.||.||.||..|.|||||||||||.||||||||..|||||||||||.|.||||  |||
Sbjct 1163  CACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACG--GGC  1234

Query 1324  --GGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATCGTC  1395
              |||...||.||||||..||||||.|||||||||||.||.|||||||||||.||||||||.|||||||.|||.
Sbjct 1235  AGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTG  1308

Query 1396  CACTTCCACAGATCTGGGGCGCC-----CTCCGTCCTGCCCCACG  1435
            |||||||||.|.||.||.|||||     |.|||  ||||..    
Sbjct 1309  CACTTCCACTGCTCGGGCGCGCCTGTGGCCCCG--CTGCAG----  1347