Nucleotide Global Alignment

Description

• Query: TRCN0000489411
• Subject: NM_177407.4
• Aligned Length: 1639
• Identities: 1158
• Gaps: 217

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
            |||||.||||   |.|||||||||||.|||||.||.|||||||||||||..|||||..|.||.|||||.||.||
Sbjct    1  ATGGCTACCA---TCACCTGCACCCGATTCACAGAAGAGTACCAGCTCTTTGAGGAACTGGGAAAGGGAGCCTT  71

Query   75  CTCTGTGGTCCGACGCTGTGTCAAGCT-CTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAG  147
            |||||||||.||..|.|||||.|||.| ||| .|.||.||.||||||||.||||||||.|||||||||||||||
Sbjct   72  CTCTGTGGTGCGCAGGTGTGTGAAGGTGCTG-GCTGGTCAGGAGTATGCTGCCAAGATTATCAACACCAAGAAG  144

Query  148  CTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGT  221
            ||.|||||||||||||||||||||||||||.|.|||||.||.|||||||||.|..|||||||..||||.|||||
Sbjct  145  CTTTCAGCCAGAGATCACCAGAAGCTGGAGCGTGAGGCCCGCATCTGCCGCTTGTTGAAGCACCCCAATATCGT  218

Query  222  GCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCT  295
            .||.|||||.||||||||||||||||||||...|||||||||..|||||||||||||.|||||||||||.||.|
Sbjct  219  CCGACTCCATGACAGCATCTCCGAGGAGGGGCACCACTACCTTATCTTCGATCTGGTTACTGGTGGGGAACTGT  292

Query  296  TTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCC  369
            ||||||||||||||||..|.|||||.|||||.||.|||||||||||.||||||||||||||||||.|||||||.
Sbjct  293  TTGAAGACATTGTGGCCCGGGAGTATTACAGTGAAGCTGATGCCAGCCACTGTATCCAGCAGATCTTGGAGGCT  366

Query  370  GTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTG  443
            ||.||.||.||||||||.||||||||.||.||..|.|||||.|||||.|||||.|||.|.||||||...|||..
Sbjct  367  GTGCTACACTGTCACCAGATGGGGGTGGTGCATCGTGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCGAAGCT  440

Query  444  CAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTG  517
            |||.||.|||||.|||||||||||||||||.|||||.||.||.||||||.|||||||.||||||||||||||||
Sbjct  441  CAAGGGCGCTGCTGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTG  514

Query  518  GTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATC  591
            |.|||||.||.|||||.||.|||||.|||||.||.||.||..|.||.||..||||.||.|||||.||||||.|.
Sbjct  515  GGTTCGCAGGGACACCTGGATACCTCTCCCCAGAAGTGCTGAGGAAGGACCCGTACGGGAAGCCCGTGGACCTG  588

Query  592  TGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCT  665
            |||||.|||||.||.||||||||.|||.||||.||.||.||.||.||.||||||||.||.||||||||....||
Sbjct  589  TGGGCCTGTGGCGTCATCCTGTATATCTTGCTGGTTGGGTATCCCCCGTTCTGGGATGAAGACCAGCATCGCCT  662

Query  666  GTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAA  739
            |||||||||||||||.||||||||||||||.|||||.||.||.||.||||||||||||||.||.||||||||..
Sbjct  663  GTACCAGCAGATCAAAGCTGGTGCCTATGATTTCCCATCACCAGAATGGGACACCGTCACCCCAGAAGCCAAGG  736

Query  740  ACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGG  813
            |.||.|||||..|||||||||||||||||||..||||.||||||||.|||..||||||.||.||||||||.|||
Sbjct  737  ATCTGATCAATAAGATGCTGACCATCAACCCGTCCAAACGCATCACGGCCGCTGAGGCTCTCAAGCACCCATGG  810

Query  814  GTCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATG  886
            .|||..||.||||||||.||.||.||| || |||||||||||||||||.|||||.||.|||||.||||||||||
Sbjct  811  ATCTCGCACCGCTCCACCGTGGCCTCC-TGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATG  883

Query  887  CCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCT-CAGTGGGCAGACAGAC  959
            |||||||.||.||.||||||||||||||||||||.|||||||||||..||||.|||| |.|.|||.|||     
Sbjct  884  CCAGGAGGAAACTGAAGGGAGCCATCCTCACCACTATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGA-----  952

Query  960  CACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTTTAC  1033
                ||                                             ||.|||                 
Sbjct  953  ----GC---------------------------------------------GGAGGA-----------------  960

Query 1034  TCAACAAGAAAGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAA  1107
              |||||||    |||                ||||                                      
Sbjct  961  --AACAAGA----AGA----------------ACGA--------------------------------------  974

Query 1108  GGGACGCTTCCTCCTGCCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAAGGAGTC  1181
                                  |||.|                                     |.|||||.||
Sbjct  975  ----------------------TGGTG-------------------------------------TGAAGGAATC  989

Query 1182  TTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCGGAAGCAGGAGATCATTAAGACCACGG  1255
            ||||||.||..||||.||||||||.|||||.||||||.|.||||..||.||.|||||.||.||.||....||.|
Sbjct  990  TTCTGAGAGCACCAACACCACCATTGAGGACGAAGACACCAAAGTGCGCAAACAGGAAATTATCAAAGTGACAG  1063

Query 1256  AGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCG  1329
            |||||||.|||||.|||.|.|.|||.||.|||||||||.|||||.||||.||.||.|||||.||..||||..|.
Sbjct 1064  AGCAGCTGATCGAAGCCATAAGCAATGGAGACTTTGAGTCCTACACGAAGATGTGCGACCCTGGAATGACAGCC  1137

Query 1330  TTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG-  1402
            |||||.||.||.||.|||||.||||||||.||.||..|||||||.||..|||||||.||.||.|||||| ||| 
Sbjct 1138  TTTGAACCAGAGGCCCTGGGGAACCTGGTGGAGGGCCTGGACTTTCATCGATTCTATTTTGAAAACCTG-TGGT  1210

Query 1403  CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGC  1476
            ||..||||||||||||..|.|||||.||||||||||||||.|||.|.|||.|.||.||.||.||..|.||||||
Sbjct 1211  CCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAACCCTCACATCCACCTGATGGGTGACGAGTCAGCCTGC  1284

Query 1477  ATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGG----CCCCGCACCAGCCAGTCTGAGGAGA  1546
            |||||.||.|||||..||||.||||||.|.||  .|||||  |||    ||||||||...||||||.|||||||
Sbjct 1285  ATCGCCTATATCCGCATCACTCAGTACCTGGA--TGCAGG--CGGCATACCCCGCACGGCCCAGTCAGAGGAGA  1354

Query 1547  CCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCG  1620
            |||||||.|||||||||.|.||||||||.|||||||.|||.|||||||||.|.||.||.|||||     |.|||
Sbjct 1355  CCCGCGTCTGGCACCGCAGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCC-----CTCCG  1423

Query 1621  --CTGCAGG--  1627
              ||||.|.  
Sbjct 1424  TCCTGCCGCAT  1434