Nucleotide Global Alignment
Description
- Query:
- TRCN0000489431
- Subject:
- NM_009900.2
- Aligned Length:
- 2729
- Identities:
- 995
- Gaps:
- 1573
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCTGCAACGGCTGCGGCGGCCGCGGCGGCGGCGGCGGGGGAAGGGATGGAGCCTCGAGCGCTGCAGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGCAGACCCTGATGTATGGCCGGTACACTCAGGAACTCGGGGCCTTTGCCAAAGAGGAAGCTGCTCGTATTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCTGGGAGGGCCTGAGCCCTGGAAGGGGTCCCCTTCTGCCCGGGCTACCCCAGAGCTCCTAGAATATGGACAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCGATGTGCCAGATGTCGCATTTGTTCTGTACGCTGCCACAAGTTCCTGGTGTCCAGGGTCGGTGAAGACTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATCTTCCTGGTTCTGTTGGGGCTCCTCATGGCACTGGTCAGCTGGGCTATGGACTATGCCATCGCTGTCTGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TACAGGCTCAGCAATGGATGTCCCGGGGCTTAAACACCAACATCTTACTCCAGTACCTGGCTTGGGTTACCTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCGTGGTCCTCATCACTTTCTCTGCTGGATTCACCCAGATCCTGGCCCCACAGGCTGTCGGGTCTGGCATCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGAAATGAAAACCATCCTTCGGGGAGTGGTGCTGAAAGAATACCTCACCCTCAAGACCTTTGTAGCTAAGGTCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGGGCTAACCTGTGCCCTGGGCAGTGGGATGCCCCTTGGCAAAGAGGGACCCTTTGTGCACATTGCCAGCATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGTGCCGCCCTTCTCAGCAAGTTCCTCTCCCTCTTTGGGGGTATCTATGAGCATGAGTCCCGGAACACGGAGAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTAGCTGCTGCATGCGCAGTAGGAGTGGGCTGCTGCTTTGCCGCACCAATCGGAGGGGTCCTATTCAGCATTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGTCACCTCCACCTTCTTCGCTGTTAGGAACTACTGGCGGGGCTTCTTTGCGGCCACCTTCAGTGCCTTCATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTCGGGTCTTGGCAGTGTGGAACCGTGATGAAGAAACCATCACAGCTCTCTTCAAAACTCGGTTCCGACTCGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATTGGCATTGCTAGTGGCTTCGGGGGAGCCCTCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGTCTACCTGAACCGGAAGATTGTCCAGGTGATGCGGAAGCAAAAAACCATCAACCGCTTCCTCATGAGGAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGGCTGCTCTTCCCGGCACTGGTGACTCTGCTCATCTCCACTCTGACCTTCCCCCCTGGCTTTGGACAGTTCAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGCCGGACAGCTCTCACAGAAGGAGACCCTAGTCACTCTGTTTGACAACCGGACGTGGGTCCGCCAGGGCCTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGAGGATCTAGAGCTACCCAGCACTTCACAGGCCTGGAGCCCACCACGTGCCAATGTCTTCCTTACTCTGGTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATCTTCATCCTCATGAAGTTCTGGATGTCTGCACTGGCTACCACTATCCCAGTGCCCTGTGGGGCCTTCATGCC 1406
Query 1 ----------------------------------------------ATGGCTGCCTGGTTCCCAGATGGAATTC 28
|||||.|||||||||||||||||.||||
Sbjct 1407 TGTCTTTGTCATTGGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGCATGGCCGCCTGGTTCCCAGATGGGATTC 1480
Query 29 ATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGGGCAGCTGCGCTGGCAGGAGCG 102
|.||.||.||||||||||||||.|||||.|||||.|||||.||||||||||||||.|||||.||.||||||||.
Sbjct 1481 ACACAGATAGCAGCACCTACCGAATTGTACCTGGAGGCTATGCTGTGGTCGGGGCGGCTGCACTCGCAGGAGCA 1554
Query 103 GTGACACACACAGTGTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCTGCCTGTCAT 176
||||||||||||||||||||.||.|||||.||.|||||||||||.||||||||.||.|||||.|||||||||||
Sbjct 1555 GTGACACACACAGTGTCCACAGCAGTGATTGTCTTCGAGCTCACGGGCCAGATCGCTCACATTCTGCCTGTCAT 1628
Query 177 GATCGTCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCCTCCCTCTATGACAGCATCATCCGAATCA 250
|||.|..|||||||||||.||.|||||.||||||||.||||||||.||.|||||||||||.||||||||.||||
Sbjct 1629 GATTGCTGTCATCCTGGCTAATGCTGTTGCCCAGAGCCTGCAGCCATCGCTCTATGACAGTATCATCCGCATCA 1702
Query 251 AGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATG 324
||||.|||||||||||.||||||||.||||||||||||||||||||||||||||||||.||.||||||||||||
Sbjct 1703 AGAAGCTGCCCTACCTACCTGAGCTGGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGAGTCGAGGACATCATG 1776
Query 325 GTGCGGGATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGG 398
||.||||||||.||||||||.||||||||||||||.||.|||||||||||.||||||||||||||.||||||||
Sbjct 1777 GTTCGGGATGTACCCCATGTAGCCCTCAGCTGCACTTTTCGGGACCTGCGGTTGGCACTGCACAGAACCAAGGG 1850
Query 399 CCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGG 472
|||.|||.||||||||||||||||.||||||||||||||.||.|||||.||||||||.||.|||||||||||.|
Sbjct 1851 CCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGATCCATCGAACGCTCACAGGTGGTAG 1924
Query 473 CATTGTTGGGGGCCCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCT 546
||.|..|.||.|||||||||||||||||.|||.||||||||||||||||..|||..|||....|||||...|||
Sbjct 1925 CACTACTAGGAGCCCAGCTGAGCCCAGCGCGCAGGCGGCAGCACATGCAAAAGCTAAGAAAAGCCCAGCTGTCT 1998
Query 547 CCACTATCTGATCAGGAGGGTCCCCCTACCCCTGAGGCTTCTGTCTGCTTCCAGGTGAACACAGAAGACTCAGC 620
||||..||.|||||||||.|.|||||||.|.|.|||.|.|||.||.|||||||||||||||||||.|||||.|.
Sbjct 1999 CCACCGTCGGATCAGGAGAGCCCCCCTAGCTCCGAGACATCTATCCGCTTCCAGGTGAACACAGAGGACTCGGG 2072
Query 621 CTTCCCAGCAGCCCGGGGGGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAG-- 692
||||.|.|.|||||..|||.||||.|||||||||||.||||||||.||.|||||.|||||||| ||.|||
Sbjct 2073 CTTCTCTGGAGCCCACGGGCAGACTCACAAGCCCCTGAAGCCTGCTCTAAAGAGAGGGCCCAG---CAACAGTA 2143
Query 693 -GAACCTCGGAGAGA--GTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCA 763
.|.||| |.|| || ||.|||||||.|.|...|||||.||||||||.||||||.|.||||||||||||||||
Sbjct 2144 CAAGCCT-GCAG-GAAGGTACCACAGGCAACATGGAGTCAGCAGGCATTGCCCTCAGAAGCCTCTTCTGTGGCA 2215
Query 764 GTCCACCCCCTGAGGCTGCTTC------GGAGAAGTTGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGA 831
|||||||.|..|||||..|.|| |||.||||..|||||||||||.|||||||||||||||||.||||||
Sbjct 2216 GTCCACCTCTGGAGGCAACATCAGAATTGGAAAAGTCAGAATCCTGTGACAAGCGCAAGCTGAAGCGGGTCCGA 2289
Query 832 ATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAAG------------------------- 880
|||||||||||.||||||.|.||||.|||||.|||||||||.|||||.|
Sbjct 2290 ATCTCCCTGGCGAGTGACTCAGACCCGGAAGCCGAGATGAGTCCTGAGGAGATCTTAGAGTGGGAAGAACAGCA 2363
Query 881 -------------------------------------------------------------------------- 880
Sbjct 2364 GCTAGATGAGCCAGTCAACTTCAGTGACTGCAAAATCGACCCTGCCCCCTTCCAGCTGGTGGAGCGGACTTCTT 2437
Query 881 ------AGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATT 948
||||.|||||.|||||||||.|||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 2438 TGCACAAGACCCACACCATCTTCTCATTGCTGGGAGTGGACCATGCTTATGTCACCAGCATTGGCAGACTCATT 2511
Query 949 GGAATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCC 1022
||.||.||.||.|||||||||||||||||||||||.||.|||||||||||||||||||||||.||||||.||||
Sbjct 2512 GGGATTGTCACCCTAAAGGAGCTCCGGAAGGCCATTGAAGGCTCTGTCACAGCACAGGGTGTTAAAGTCAGGCC 2585
Query 1023 GCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGG 1096
.|||||||||||.|||||.||||||||||||||||||||||||||.||||||||||||||||||||.|||||||
Sbjct 2586 ACCCCTCGCCAGTTTCCGGGACAGTGCCACCAGCAGCAGTGACACAGAGACCACTGAGGTGCATGCGCTCTGGG 2659
Query 1097 GGCCCCACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAA 1161
||||....|||||.||.||||||||.||.|||||.|.|||.||||||||.||.|||||.|||||.
Sbjct 2660 GGCCAAGATCCCGCCACGGCCTCCCACGAGAGGGTACCCCCTCCGACAGTGATGACAAGTGCCAG 2724
