Nucleotide Global Alignment
Description
- Query:
- TRCN0000489431
- Subject:
- XM_006521749.3
- Aligned Length:
- 1931
- Identities:
- 995
- Gaps:
- 775
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGCAGTAGGAGTGGGCTGCTGCTTTGCCGCACCAATCGGAGGAACTACTGGCGGGGCTTCTTTGCGGCCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTCAGTGCCTTCATCTTTCGGGTCTTGGCAGTGTGGAACCGTGATGAAGAAACCATCACAGCTCTCTTCAAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCGGTTCCGACTCGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATTGGCATTGCTAGTGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCGGGGGAGCCCTCTTTGTCTACCTGAACCGGAAGATTGTCCAGGTGATGCGGAAGCAAAAAACCATCAACCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCCTCATGAGGAAACGGCTGCTCTTCCCGGCACTGGTGACTCTGCTCATCTCCACTCTGACCTTCCCCCCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTTTGGACAGTTCATGGCCGGACAGCTCTCACAGAAGGAGACCCTAGTCACTCTGTTTGACAACCGGACGTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTCCGCCAGGGCCTGGTTGAGGATCTAGAGCTACCCAGCACTTCACAGGCCTGGAGCCCACCACGTGCCAATGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTCCTTACTCTGGTCATCTTCATCCTCATGAAGTTCTGGATGTCTGCACTGGCTACCACTATCCCAGTGCCCT 592
Query 1 --------------------------------------------------------------ATGGCTGCCTGG 12
|||||.||||||
Sbjct 593 GTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGCATGGCCGCCTGG 666
Query 13 TTCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGGGCAGC 86
|||||||||||.|||||.||.||.||||||||||||||.|||||.|||||.|||||.||||||||||||||.||
Sbjct 667 TTCCCAGATGGGATTCACACAGATAGCAGCACCTACCGAATTGTACCTGGAGGCTATGCTGTGGTCGGGGCGGC 740
Query 87 TGCGCTGGCAGGAGCGGTGACACACACAGTGTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCC 160
|||.||.||||||||.||||||||||||||||||||.||.|||||.||.|||||||||||.||||||||.||.|
Sbjct 741 TGCACTCGCAGGAGCAGTGACACACACAGTGTCCACAGCAGTGATTGTCTTCGAGCTCACGGGCCAGATCGCTC 814
Query 161 ACATCCTGCCTGTCATGATCGTCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCCTCCCTCTATGAC 234
||||.||||||||||||||.|..|||||||||||.||.|||||.||||||||.||||||||.||.|||||||||
Sbjct 815 ACATTCTGCCTGTCATGATTGCTGTCATCCTGGCTAATGCTGTTGCCCAGAGCCTGCAGCCATCGCTCTATGAC 888
Query 235 AGCATCATCCGAATCAAGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG 308
||.||||||||.||||||||.|||||||||||.||||||||.||||||||||||||||||||||||||||||||
Sbjct 889 AGTATCATCCGCATCAAGAAGCTGCCCTACCTACCTGAGCTGGGCTGGGGCCGCCACCAGCAGTACCGGGTGCG 962
Query 309 TGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCAC 382
.||.||||||||||||||.||||||||.||||||||.||||||||||||||.||.|||||||||||.|||||||
Sbjct 963 AGTCGAGGACATCATGGTTCGGGATGTACCCCATGTAGCCCTCAGCTGCACTTTTCGGGACCTGCGGTTGGCAC 1036
Query 383 TGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCTCCATCGAG 456
|||||||.|||||||||||.|||.||||||||||||||||.||||||||||||||.||.|||||.||||||||.
Sbjct 1037 TGCACAGAACCAAGGGCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGATCCATCGAA 1110
Query 457 CGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAG 530
||.|||||||||||.|||.|..|.||.|||||||||||||||||.|||.||||||||||||||||..|||..||
Sbjct 1111 CGCTCACAGGTGGTAGCACTACTAGGAGCCCAGCTGAGCCCAGCGCGCAGGCGGCAGCACATGCAAAAGCTAAG 1184
Query 531 AGCCACCCAGACCTCTCCACTATCTGATCAGGAGGGTCCCCCTACCCCTGAGGCTTCTGTCTGCTTCCAGGTGA 604
|....|||||...|||||||..||.|||||||||.|.|||||||.|.|.|||.|.|||.||.||||||||||||
Sbjct 1185 AAAAGCCCAGCTGTCTCCACCGTCGGATCAGGAGAGCCCCCCTAGCTCCGAGACATCTATCCGCTTCCAGGTGA 1258
Query 605 ACACAGAAGACTCAGCCTTCCCAGCAGCCCGGGGGGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGG 678
|||||||.|||||.|.||||.|.|.|||||..|||.||||.|||||||||||.||||||||.||.|||||.|||
Sbjct 1259 ACACAGAGGACTCGGGCTTCTCTGGAGCCCACGGGCAGACTCACAAGCCCCTGAAGCCTGCTCTAAAGAGAGGG 1332
Query 679 CCCAGTGTCACCAG---GAACCTCGGAGAGA--GTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGG 747
||||| ||.||| .|.||| |.|| || ||.|||||||.|.|...|||||.||||||||.||||||.|.
Sbjct 1333 CCCAG---CAACAGTACAAGCCT-GCAG-GAAGGTACCACAGGCAACATGGAGTCAGCAGGCATTGCCCTCAGA 1401
Query 748 AGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTGCTTC------GGAGAAGTTGGAATCCTGTGAGAAGCGCAA 815
|||||||||||||||||||||||.|..|||||..|.|| |||.||||..|||||||||||.||||||||
Sbjct 1402 AGCCTCTTCTGTGGCAGTCCACCTCTGGAGGCAACATCAGAATTGGAAAAGTCAGAATCCTGTGACAAGCGCAA 1475
Query 816 GCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAAG--------- 880
|||||||||.|||||||||||||||||.||||||.|.||||.|||||.|||||||||.|||||.|
Sbjct 1476 GCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTCAGACCCGGAAGCCGAGATGAGTCCTGAGGAGATCTTAG 1549
Query 881 -------------------------------------------------------------------------- 880
Sbjct 1550 AGTGGGAAGAACAGCAGCTAGATGAGCCAGTCAACTTCAGTGACTGCAAAATCGACCCTGCCCCCTTCCAGCTG 1623
Query 881 ----------------------AGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAG 932
||||.|||||.|||||||||.|||||||||||||||||||||||||||||||
Sbjct 1624 GTGGAGCGGACTTCTTTGCACAAGACCCACACCATCTTCTCATTGCTGGGAGTGGACCATGCTTATGTCACCAG 1697
Query 933 TATTGGCAGACTCATTGGAATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGG 1006
.|||||||||||||||||.||.||.||.|||||||||||||||||||||||.||.|||||||||||||||||||
Sbjct 1698 CATTGGCAGACTCATTGGGATTGTCACCCTAAAGGAGCTCCGGAAGGCCATTGAAGGCTCTGTCACAGCACAGG 1771
Query 1007 GTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGACCACTGAG 1080
||||.||||||.||||.|||||||||||.|||||.||||||||||||||||||||||||||.||||||||||||
Sbjct 1772 GTGTTAAAGTCAGGCCACCCCTCGCCAGTTTCCGGGACAGTGCCACCAGCAGCAGTGACACAGAGACCACTGAG 1845
Query 1081 GTGCATGCACTCTGGGGGCCCCACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAA 1154
||||||||.|||||||||||....|||||.||.||||||||.||.|||||.|.|||.||||||||.||.|||||
Sbjct 1846 GTGCATGCGCTCTGGGGGCCAAGATCCCGCCACGGCCTCCCACGAGAGGGTACCCCCTCCGACAGTGATGACAA 1919
Query 1155 ATGCCAA 1161
.|||||.
Sbjct 1920 GTGCCAG 1926
