Nucleotide Global Alignment
Description
- Query:
- TRCN0000489431
- Subject:
- XM_017316862.1
- Aligned Length:
- 2750
- Identities:
- 995
- Gaps:
- 1594
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCTGCAACGGCTGCGGCGGCCGCGGCGGCGGCGGCGGGGGAAGGGATGGAGCCTCGAGCGCTGCAGTA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGCAGACCCTGATGTATGGCCGGTACACTCAGGAACTCGGGGCCTTTGCCAAAGAGGAAGCTGCTCGTATTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCTGGGAGGGCCTGAGCCCTGGAAGGGGTCCCCTTCTGCCCGGGCTACCCCAGAGCTCCTAGAATATGGACAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCGATGTGCCAGATGTCGCATTTGTTCTGTACGCTGCCACAAGTTCCTGGTGTCCAGGGTCGGTGAAGACTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATCTTCCTGGTTCTGTTGGGGCTCCTCATGGCACTGGTCAGCTGGGCTATGGACTATGCCATCGCTGTCTGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TACAGGGTGAGGGCAAAGGCTGGCGAGCTCAGCAATGGATGTCCCGGGGCTTAAACACCAACATCTTACTCCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACCTGGCTTGGGTTACCTACCCCGTGGTCCTCATCACTTTCTCTGCTGGATTCACCCAGATCCTGGCCCCACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCTGTCGGGTCTGGCATCCCCGAAATGAAAACCATCCTTCGGGGAGTGGTGCTGAAAGAATACCTCACCCTCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGACCTTTGTAGCTAAGGTCATTGGGCTAACCTGTGCCCTGGGCAGTGGGATGCCCCTTGGCAAAGAGGGACCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTTGTGCACATTGCCAGCATGTGTGCCGCCCTTCTCAGCAAGTTCCTCTCCCTCTTTGGGGGTATCTATGAGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGAGTCCCGGAACACGGAGATGCTAGCTGCTGCATGCGCAGTAGGAGTGGGCTGCTGCTTTGCCGCACCAATCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGGGGTCCTATTCAGCATTGAAGTCACCTCCACCTTCTTCGCTGTTAGGAACTACTGGCGGGGCTTCTTTGCG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCACCTTCAGTGCCTTCATCTTTCGGGTCTTGGCAGTGTGGAACCGTGATGAAGAAACCATCACAGCTCTCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAAAACTCGGTTCCGACTCGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATTGGCATTGCTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTGGCTTCGGGGGAGCCCTCTTTGTCTACCTGAACCGGAAGATTGTCCAGGTGATGCGGAAGCAAAAAACCATC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AACCGCTTCCTCATGAGGAAACGGCTGCTCTTCCCGGCACTGGTGACTCTGCTCATCTCCACTCTGACCTTCCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCCTGGCTTTGGACAGTTCATGGCCGGACAGCTCTCACAGAAGGAGACCCTAGTCACTCTGTTTGACAACCGGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CGTGGGTCCGCCAGGGCCTGGTTGAGGATCTAGAGCTACCCAGCACTTCACAGGCCTGGAGCCCACCACGTGCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATGTCTTCCTTACTCTGGTCATCTTCATCCTCATGAAGTTCTGGATGTCTGCACTGGCTACCACTATCCCAGT 1406
Query 1 -------------------------------------------------------------------ATGGCTG 7
|||||.|
Sbjct 1407 GCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGCATGGCCG 1480
Query 8 CCTGGTTCCCAGATGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGG 81
||||||||||||||||.|||||.||.||.||||||||||||||.|||||.|||||.|||||.||||||||||||
Sbjct 1481 CCTGGTTCCCAGATGGGATTCACACAGATAGCAGCACCTACCGAATTGTACCTGGAGGCTATGCTGTGGTCGGG 1554
Query 82 GCAGCTGCGCTGGCAGGAGCGGTGACACACACAGTGTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGAT 155
||.|||||.||.||||||||.||||||||||||||||||||.||.|||||.||.|||||||||||.||||||||
Sbjct 1555 GCGGCTGCACTCGCAGGAGCAGTGACACACACAGTGTCCACAGCAGTGATTGTCTTCGAGCTCACGGGCCAGAT 1628
Query 156 TGCCCACATCCTGCCTGTCATGATCGTCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCCTCCCTCT 229
.||.|||||.||||||||||||||.|..|||||||||||.||.|||||.||||||||.||||||||.||.||||
Sbjct 1629 CGCTCACATTCTGCCTGTCATGATTGCTGTCATCCTGGCTAATGCTGTTGCCCAGAGCCTGCAGCCATCGCTCT 1702
Query 230 ATGACAGCATCATCCGAATCAAGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGG 303
|||||||.||||||||.||||||||.|||||||||||.||||||||.|||||||||||||||||||||||||||
Sbjct 1703 ATGACAGTATCATCCGCATCAAGAAGCTGCCCTACCTACCTGAGCTGGGCTGGGGCCGCCACCAGCAGTACCGG 1776
Query 304 GTGCGTGTGGAGGACATCATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTT 377
|||||.||.||||||||||||||.||||||||.||||||||.||||||||||||||.||.|||||||||||.||
Sbjct 1777 GTGCGAGTCGAGGACATCATGGTTCGGGATGTACCCCATGTAGCCCTCAGCTGCACTTTTCGGGACCTGCGGTT 1850
Query 378 GGCACTGCACAGGACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCTCCA 451
||||||||||||.|||||||||||.|||.||||||||||||||||.||||||||||||||.||.|||||.||||
Sbjct 1851 GGCACTGCACAGAACCAAGGGCCGTATGTTGGCCCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGATCCA 1924
Query 452 TCGAGCGTTCACAGGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAG 525
||||.||.|||||||||||.|||.|..|.||.|||||||||||||||||.|||.||||||||||||||||..||
Sbjct 1925 TCGAACGCTCACAGGTGGTAGCACTACTAGGAGCCCAGCTGAGCCCAGCGCGCAGGCGGCAGCACATGCAAAAG 1998
Query 526 CGCAGAGCCACCCAGACCTCTCCACTATCTGATCAGGAGGGTCCCCCTACCCCTGAGGCTTCTGTCTGCTTCCA 599
|..|||....|||||...|||||||..||.|||||||||.|.|||||||.|.|.|||.|.|||.||.|||||||
Sbjct 1999 CTAAGAAAAGCCCAGCTGTCTCCACCGTCGGATCAGGAGAGCCCCCCTAGCTCCGAGACATCTATCCGCTTCCA 2072
Query 600 GGTGAACACAGAAGACTCAGCCTTCCCAGCAGCCCGGGGGGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGA 673
||||||||||||.|||||.|.||||.|.|.|||||..|||.||||.|||||||||||.||||||||.||.||||
Sbjct 2073 GGTGAACACAGAGGACTCGGGCTTCTCTGGAGCCCACGGGCAGACTCACAAGCCCCTGAAGCCTGCTCTAAAGA 2146
Query 674 GGGGGCCCAGTGTCACCAG---GAACCTCGGAGAGA--GTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCC 742
|.|||||||| ||.||| .|.||| |.|| || ||.|||||||.|.|...|||||.||||||||.||||
Sbjct 2147 GAGGGCCCAG---CAACAGTACAAGCCT-GCAG-GAAGGTACCACAGGCAACATGGAGTCAGCAGGCATTGCCC 2215
Query 743 TCCGGAGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCTGCTTC------GGAGAAGTTGGAATCCTGTGAGAAG 810
||.|.|||||||||||||||||||||||.|..|||||..|.|| |||.||||..|||||||||||.|||
Sbjct 2216 TCAGAAGCCTCTTCTGTGGCAGTCCACCTCTGGAGGCAACATCAGAATTGGAAAAGTCAGAATCCTGTGACAAG 2289
Query 811 CGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAAG---- 880
||||||||||||||.|||||||||||||||||.||||||.|.||||.|||||.|||||||||.|||||.|
Sbjct 2290 CGCAAGCTGAAGCGGGTCCGAATCTCCCTGGCGAGTGACTCAGACCCGGAAGCCGAGATGAGTCCTGAGGAGAT 2363
Query 881 -------------------------------------------------------------------------- 880
Sbjct 2364 CTTAGAGTGGGAAGAACAGCAGCTAGATGAGCCAGTCAACTTCAGTGACTGCAAAATCGACCCTGCCCCCTTCC 2437
Query 881 ---------------------------AGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTC 927
||||.|||||.|||||||||.||||||||||||||||||||||||||
Sbjct 2438 AGCTGGTGGAGCGGACTTCTTTGCACAAGACCCACACCATCTTCTCATTGCTGGGAGTGGACCATGCTTATGTC 2511
Query 928 ACCAGTATTGGCAGACTCATTGGAATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGC 1001
|||||.|||||||||||||||||.||.||.||.|||||||||||||||||||||||.||.||||||||||||||
Sbjct 2512 ACCAGCATTGGCAGACTCATTGGGATTGTCACCCTAAAGGAGCTCCGGAAGGCCATTGAAGGCTCTGTCACAGC 2585
Query 1002 ACAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGACCA 1075
|||||||||.||||||.||||.|||||||||||.|||||.||||||||||||||||||||||||||.|||||||
Sbjct 2586 ACAGGGTGTTAAAGTCAGGCCACCCCTCGCCAGTTTCCGGGACAGTGCCACCAGCAGCAGTGACACAGAGACCA 2659
Query 1076 CTGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGAC 1149
|||||||||||||.|||||||||||....|||||.||.||||||||.||.|||||.|.|||.||||||||.||.
Sbjct 2660 CTGAGGTGCATGCGCTCTGGGGGCCAAGATCCCGCCACGGCCTCCCACGAGAGGGTACCCCCTCCGACAGTGAT 2733
Query 1150 GACAAATGCCAA 1161
|||||.|||||.
Sbjct 2734 GACAAGTGCCAG 2745
