Nucleotide Global Alignment
Description
- Query:
- TRCN0000489431
- Subject:
- XR_384520.3
- Aligned Length:
- 3933
- Identities:
- 496
- Gaps:
- 3361
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCGGGGCTTCTTCACTTCCGCCGGGAAGGGCCACCTCCGAGGTGCTCGGGCCTTGTGGGCGAGTCTCAAAACT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGTGACTCCGTCCAAGGCGGGGACAGATTAAGTCCCACCTCCGACGGGGTACCGCGCTGCGCCCGGCTCGACG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGCCCTCTTCAGACTGTGGATCCCAAAGCGTGGAAAGCTTGGGGGCCTAACCCAGCCAGGAACCTTGATCCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCCAGAGAAGCCCGGCCCTAGCCCTTCCCTGAAGTCCGCGTGCCGGCCGAGGGCACAGTCCGCGCTGCAGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTCTGGACACTGTCCTCTCCAGTGGCTCCAACCTAACGCTGCCCATCCTCTTTGTGCCCTCGACACCTTCTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTCCTTCCCAGGACCCCGAAAGACAATGTGGAGCCTCAGTAGGCCGTTTCCTCAGGGCGTCAGCAGCTACTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATTCCCCCTTAAGCGGTGCCTGGGAGGAGCGACCTCTGCTCCCCCCCCCCCCCACACACACACACACACCCGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCCCAGGAGCGGCCTCCCCCGCACCAATAGCTCCCTTCCCTCGGGCCTCACCCCTTCCCGTCCCCTCCCACCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCACCTCCGCCCCTCTTTCCAGGCCTAGCCATTCCAGGTGCACCTTCCCGGGGGAACCCGGAGGAAAGGAAGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAAGGGAGGCAAGGAGGGAGCCGGCTCTCGGGCATCCTCCCAGATGCGTCTGAGCCGCCTGAAAGTGTGAAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAGGCTGCCCCTGTCCGGTCTGGCTTAGAGAGCCCGAATTAGCTTTTGTCAGTAGCCCCCTACCCCAGTTCAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGTCCCCACATCTCCAGCCCCTCCCGCACAACGCTGCAGCCGCGGGAGAGCCCGTCCCTTCCACGTGCCAGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACCCGCCCCCGCCCGGCCCCCGCACCCTCAGGGCGCTGGGTTAATCCCGGGCCTCCGTGGCGAAGGGGTGCGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GATCGTGTTTCAAGCGCCCCCTGCCGCCTCTCCGGACACCAGGAGGCGGCCCCAATGCAGACCCCGGCCGGGCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGGACGCCCCTGCAGATGGGCCGGGGCGGAGCAGCAAAGCAGGGCACCGCCCTCGGCCCGCCCGCCGAGGAGGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACGCTAGCGGGAGGCTGAGCCTGCGGCGCGCGCCCGGGGACCCGTCGCACTCTGCACTCGGCCGCCTGGGCTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGGGGACGGGACGGGTGCGGGCGCGGGCTCAGCGGGCCGGGAGCTGAGTCAAGGCCGAGAAGCAGAGGGAGGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAGGACAGTGCACCGAGATGGCGGCTGCAACGGCTGCGGCGGCCGCGGCGGCGGCGGCGGGGGAAGGGATGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCCTCGAGCGCTGCAGTACGAGCAGACCCTGATGTATGGCCGGTACACTCAGGAACTCGGGGCCTTTGCCAAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGAAGCTGCTCGTATTCGCCTGGGAGGGCCTGAGCCCTGGAAGGGGTCCCCTTCTGCCCGGGCTACCCCAGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTCCTAGAATATGGACAGAGCCGATGTGCCAGATGTCGCATTTGTTCTGTACGCTGCCACAAGTTCCTGGTGTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGGGTCGGTGAAGACTGGATCTTCCTGGTTCTGTTGGGGCTCCTCATGGCACTGGTCAGCTGGGCTATGGACT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGCCATCGCTGTCTGTCTACAGGCTCAGCAATGGATGTCCCGGGGCTTAAACACCAACATCTTACTCCAGTAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTGGCTTGGGTTACCTACCCCGTGGTCCTCATCACTTTCTCTGCTGGATTCACCCAGATCCTGGCCCCACAGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGTCGGGTCTGGCATCCCCGAAATGAAAACCATCCTTCGGGGAGTGGTGCTGAAAGAATACCTCACCCTCAAGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTTTGTAGCTAAGGTCATTGGGCTAACCTGTGCCCTGGGCAGTGGGATGCCCCTTGGCAAAGAGGGACCCTTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTGCACATTGCCAGCATGTGTGCCGCCCTTCTCAGCAAGTTCCTCTCCCTCTTTGGGGGTATCTATGAGCATGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTCCCGGAACACGGAGATGCTAGCTGCTGCATGCGCAGTAGGAGTGGGCTGCTGCTTTGCCGCACCAATCGGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGGTCCTATTCAGCATTGAAGTCACCTCCACCTTCTTCGCTGTTAGGAACTACTGGCGGGGCTTCTTTGCGGCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCTTCAGTGCCTTCATCTTTCGGGTCTTGGCAGTGTGGAACCGTGATGAAGAAACCATCACAGCTCTCTTCAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AACTCGGTTCCGACTCGACTTCCCATTTGACCTGCAAGAGCTGCCAGCCTTTGCTGTCATTGGCATTGCTAGTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCTTCGGGGGAGCCCTCTTTGTCTACCTGAACCGGAAGATTGTCCAGGTGATGCGGAAGCAAAAAACCATCAAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CGCTTCCTCATGAGGAAACGGCTGCTCTTCCCGGCACTGGTGACTCTGCTCATCTCCACTCTGACCTTCCCCCC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGGCTTTGGACAGTTCATGGCCGGACAGCTCTCACAGAAGGAGACCCTAGTCACTCTGTTTGACAACCGGACGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGGTCCGCCAGGGCCTGGTTGAGGATCTAGAGCTACCCAGCACTTCACAGGCCTGGAGCCCACCACGTGCCAAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTCTTCCTTACTCTGGTCATCTTCATCCTCATGAAGTTCTGGATGTCTGCACTGGCTACCACTATCCCAGTGCC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTGTGGGGCCTTCATGCCTGTCTTTGTCATTGTGTTCCCCTACTACCTCTTTCTCTTCCTAAAACCCTCCCTGA 2738
Query 1 ----------------------------------ATGGCTGCCTGGTTCCCAGATGGAATTCATACGGACAGCA 40
|||||.|||||||||||||||||.|||||.||.||.||||
Sbjct 2739 AGGAGCGGCATTTGGGCGGCTGGTGGGCGAAAGCATGGCCGCCTGGTTCCCAGATGGGATTCACACAGATAGCA 2812
Query 41 GCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGGGCAGCTGCGCTGGCAGGAGCGGTGACACACACA 114
||||||||||.|||||.|||||.|||||.||||||||||||||.|||||.||.||||||||.||||||||||||
Sbjct 2813 GCACCTACCGAATTGTACCTGGAGGCTATGCTGTGGTCGGGGCGGCTGCACTCGCAGGAGCAGTGACACACACA 2886
Query 115 GTGTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCTGCCTGTCATGATCGTCGTCAT 188
||||||||.||.|||||.||.|||||||||||.||||||||.||.|||||.||||||||||||||.|..|||||
Sbjct 2887 GTGTCCACAGCAGTGATTGTCTTCGAGCTCACGGGCCAGATCGCTCACATTCTGCCTGTCATGATTGCTGTCAT 2960
Query 189 CCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCCTCCCTCTATGACAGCATCATCCGAATCAAGAAACTGCCCT 262
||||||.||.|||||.||||||||.||||||||.||.|||||||||||.||||||||.||||||||.|||||||
Sbjct 2961 CCTGGCTAATGCTGTTGCCCAGAGCCTGCAGCCATCGCTCTATGACAGTATCATCCGCATCAAGAAGCTGCCCT 3034
Query 263 ACCTGCCTGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGGACATCATGGTGCGGGATGTT 336
||||.||||||||.||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.
Sbjct 3035 ACCTACCTGAGCTGGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGAGTCGAGGACATCATGGTTCGGGATGTA 3108
Query 337 CCCCATGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGGGCCGAATGCTGGC 410
||||||||.||||||||||||||.||.|||||||||||.||||||||||||||.|||||||||||.|||.||||
Sbjct 3109 CCCCATGTAGCCCTCAGCTGCACTTTTCGGGACCTGCGGTTGGCACTGCACAGAACCAAGGGCCGTATGTTGGC 3182
Query 411 CCTAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACAGGTGGTGGCATTGTTGGGGG 484
||||||||||||.||||||||||||||.||.|||||.||||||||.||.|||||||||||.|||.|..|.||.|
Sbjct 3183 CCTAGTGGAGTCTCCTGAGTCCATGATCCTACTGGGATCCATCGAACGCTCACAGGTGGTAGCACTACTAGGAG 3256
Query 485 CCCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCCAGACCTCTCCACTATCTGAT 558
||||||||||||||||.|||.||||||||||||||||..|||..|||....|||||...|||||||..||.|||
Sbjct 3257 CCCAGCTGAGCCCAGCGCGCAGGCGGCAGCACATGCAAAAGCTAAGAAAAGCCCAGCTGTCTCCACCGTCGGAT 3330
Query 559 CAGGAGGGTCCCCCTACCCCTGAGGCTTCTGTCTGCTTCCAGGTGAACACAGAAGACTCAGCCTTCCCAGCAGC 632
||||||.|.|||||
Sbjct 3331 CAGGAGAGCCCCCC------------------------------------------------------------ 3344
Query 633 CCGGGGGGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGTCACCAGGAACCTCGGAGAGA 706
Sbjct 3345 -------------------------------------------------------------------------- 3344
Query 707 GTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTGGCAGTCCACCCCCTGAGGCT 780
Sbjct 3345 -------------------------------------------------------------------------- 3344
Query 781 GCTTCGGAGAAGTTGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATCTCCCTGGCAAGTGACGCGGA 854
Sbjct 3345 -------------------------------------------------------------------------- 3344
Query 855 CCTGGAAGGCGAGATGAGCCCTGAAGAGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTCA 928
Sbjct 3345 -------------------------------------------------------------------------- 3344
Query 929 CCAGTATTGGCAGACTCATTGGAATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCA 1002
Sbjct 3345 -------------------------------------------------------------------------- 3344
Query 1003 CAGGGTGTGAAAGTCCGGCCGCCCCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGACCAC 1076
Sbjct 3345 -------------------------------------------------------------------------- 3344
Query 1077 TGAGGTGCATGCACTCTGGGGGCCCCACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACG 1150
Sbjct 3345 -------------------------------------------------------------------------- 3344
Query 1151 ACAAATGCCAA 1161
Sbjct 3345 ----------- 3344
