Nucleotide Global Alignment

Description

Query:
TRCN0000489471
Subject:
NM_001363657.2
Aligned Length:
1160
Identities:
900
Gaps:
16

Alignment

Query    1  ATGAGCAGAAGCAAGCGTGACAACAATTTTTATAGTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACG  74
            |||||||.||||||...|||||||.|.||.||.|||||.||..|.|||||.||.||.||||||||.||.||.||
Sbjct    1  ATGAGCAAAAGCAAAGTTGACAACCAGTTCTACAGTGTGGAAGTGGGAGACTCAACCTTCACAGTTCTCAAGCG  74

Query   75  ATATCAGAATTTAAAACCTATAGGCTCAGGAGCTCAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAA  148
            .||.||||||.||||.|||||.|||||.||.|||||.||.|||||.||.||.||.||||||||..|.|||||.|
Sbjct   75  CTACCAGAATCTAAAGCCTATTGGCTCTGGGGCTCAGGGCATAGTTTGTGCCGCGTATGATGCTGTCCTTGACA  148

Query  149  GAAATGTTGCAATCAAGAAGCTAAGCCGACCATTTCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTA  222
            |||||||.||.||.||||||||.|||.||||.||||||||.||.||.|||||||||.|.||.|||.|.|||||.
Sbjct  149  GAAATGTGGCCATTAAGAAGCTCAGCAGACCCTTTCAGAACCAAACACATGCCAAGAGAGCGTACCGGGAGCTG  222

Query  223  GTTCTTATGAAATGTGTTAATCACAAAAATATAATTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGA  296
            ||.||.|||||.|||||.||.||.|||||.||.|||.|..|.||.|||||.||||||||.||||||.|.||.||
Sbjct  223  GTCCTCATGAAGTGTGTGAACCATAAAAACATTATTAGTTTATTAAATGTCTTCACACCCCAGAAAACGCTGGA  296

Query  297  AGAATTTCAAGATGTTTACATAGTCATGGAGCTCATGGATGCAAATCTT-TGCCAAGTGATTCAGATGGAGCTA  369
            .||.||.||||||||||||.||||.|||||.||.||||||||.|| ||| ||.|||||||||||||||||..||
Sbjct  297  GGAGTTCCAAGATGTTTACTTAGTAATGGAACTGATGGATGCCAA-CTTATGTCAAGTGATTCAGATGGAATTA  369

Query  370  GATCATGAAAGAATGTCCTACCTTCTCTATCAGATGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTAT  443
            ||.|||||..|||||||.|||||.||.||.||.|||.|||||||.||.||||||||.|||||||||||||||||
Sbjct  370  GACCATGAGCGAATGTCTTACCTGCTGTACCAAATGTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTAT  443

Query  444  TCATCGGGACTTAAAGCCCAGTAATATAGTAGTAAAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGG  517
            |||..||||.|||||.||.|||||.||.|||||.||.|||||||||||.|||||.||.||.|||||.||.||||
Sbjct  444  TCACAGGGATTTAAAACCAAGTAACATTGTAGTCAAGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGG  517

Query  518  CCAGGACTGCAGGAACGAGTTTTATGATGACGCCTTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATC  591
            |||||||.|||||.||.||.||.||||||||.||.|||||.|||||.||.||.||||||||.||.|||||||||
Sbjct  518  CCAGGACAGCAGGCACAAGCTTCATGATGACTCCATATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATC  591

Query  592  CTTGGCATGGGCTACAAGGAAAACGTGGATTTATGGTCTGTGGGGTGCATTATGGGAGAAATGGTTTGCCACAA  665
            ||.||.||||||||||||||.|||||.||..|.|||||.||.||||||||.||||||||||||       |.||
Sbjct  592  CTGGGGATGGGCTACAAGGAGAACGTTGACATGTGGTCAGTAGGGTGCATCATGGGAGAAATG-------ATAA  658

Query  666  AA-------TCCTCTTTCCAGGAAGGGACTATATTGATCAGTGGAATAAAGTTATTGAACAGCTTGGAACACCA  732
            ||       |.||.|||||.||.|..||..|||||||.|||||||||||.||.||||||||.||.|||||||||
Sbjct  659  AAGGTGCAGTGCTGTTTCCTGGCACTGATCATATTGACCAGTGGAATAAGGTAATTGAACAACTAGGAACACCA  732

Query  733  TGTCCTGAATTCATGAAGAAACTGCAACCAACAGTAAGGACTTACGTTGAAAACAGACCTAAATATGCTGGATA  806
            |||||.|||||||||||||||.|||||||.||||||||.|..||.||.||.||..|.||.||.|||||.|||..
Sbjct  733  TGTCCAGAATTCATGAAGAAATTGCAACCCACAGTAAGAAACTATGTGGAGAATCGGCCCAAGTATGCGGGACT  806

Query  807  TAGCTTTGAGAAACTCTTCCCTGATGTCCTTTTCCCAGCTGACTCAGAACACAACAAACTTAAAGCCAGTCAGG  880
            .|.|||....|||||||||||.|||..|||.||||||||.|||||.||.|||||.|||||.||||||||.||.|
Sbjct  807  CACCTTCCCCAAACTCTTCCCAGATTCCCTCTTCCCAGCGGACTCCGAGCACAATAAACTCAAAGCCAGCCAAG  880

Query  881  CAAGGGATTTGTTATCCAAAATGCTGGTAATAGATGCATCTAAAAGGATCTCTGTAGATGAAGCTCTCCAACAC  954
            |.|||||.|||||.||.||.|||||.||.||.||..||.|.|||||.||.||.||.||.||.||..|.||.||.
Sbjct  881  CCAGGGACTTGTTGTCAAAGATGCTAGTGATTGACCCAGCAAAAAGAATATCAGTGGACGACGCCTTACAGCAT  954

Query  955  CCGTACATCAATGTCTGGTATGATCCTTCTGAAGCAGAAGCTCCACCACCAAAGATCCCTGACAAGCAGTTAGA  1028
            ||.||||||||.|||||||||||.||..|.||||..||.||.||.|||||..||||...||||||||||||.||
Sbjct  955  CCCTACATCAACGTCTGGTATGACCCAGCCGAAGTGGAGGCGCCTCCACCTCAGATATATGACAAGCAGTTGGA  1028

Query 1029  TGAAAGGGAACACACAATAGAAGAGTGGAAAGAATTGATATATAAGGAAGTTATGGACTTGGAGGAGAGAACCA  1102
            ||||||.|||||||||||.|||||.|||||||||.|.||.||.||||||||.|||.|.|..||.||.|..||.|
Sbjct 1029  TGAAAGAGAACACACAATTGAAGAATGGAAAGAACTTATCTACAAGGAAGTAATGAATTCAGAAGAAAAGACTA  1102

Query 1103  AGAATGGAGTTATACGGGGGCAGCCCTCTCCTTTAGCACAGGTGCAGCAG  1152
            |.|||||.||..||...||.|||||.|||||||.||||||||||||||||
Sbjct 1103  AAAATGGTGTAGTAAAAGGACAGCCTTCTCCTTCAGCACAGGTGCAGCAG  1152

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