Nucleotide Global Alignment
Description
- Query:
- TRCN0000489471
- Subject:
- NR_136583.2
- Aligned Length:
- 5814
- Identities:
- 1148
- Gaps:
- 4666
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTACTCAGCCGAGCGGCCGAGGCCGGACGACGCGGCTTGGATTGCGGAGCCGCGAGCAGCGCTGGGTAACGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCGGCGACCACCCCGGACGGCCCCTGTCCCCGCTGGCGGGCTTCCCTGTCGCCGTTCGCTGCGCTGCCGGCTT 148
Query 1 ----------------------------------------------ATGAGCAGAAGCAAGCGTGACAACAATT 28
||||||||||||||||||||||||||||
Sbjct 149 CTTGGTGAATTTTTGGATGAAGCCATTAAATTAATTGCTTGCCATCATGAGCAGAAGCAAGCGTGACAACAATT 222
Query 29 TTTATAGTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACGATATCAGAATTTAAAACCTATAGGCTCA 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTTATAGTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACGATATCAGAATTTAAAACCTATAGGCTCA 296
Query 103 GGAGCTCAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTAAGCCG 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAGCTCAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTAAGCCG 370
Query 177 ACCATTTCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTAGTTCTTATGAAATGTGTTAATCACAAAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCATTTCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTAGTTCTTATGAAATGTGTTAATCACAAAA 444
Query 251 ATATAATTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATG 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATATAATTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATG 518
Query 325 GAGCTCATGGATGCAAATCTTTGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAATGTCCTACCTTCTCTA 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGCTCATGGATGCAAATCTTTGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAATGTCCTACCTTCTCTA 592
Query 399 TCAGATGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTATTCATCGGGACTTAAAGCCCAGTAATATAG 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAGATGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTATTCATCGGGACTTAAAGCCCAGTAATATAG 666
Query 473 TAGTAAAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGGCCAGGACTGCAGGAACGAGTTTTATGATG 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TAGTAAAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGGCCAGGACTGCAGGAACGAGTTTTATGATG 740
Query 547 ACGCCTTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATCCTTGGCATGGGCTACAAGGAAAACGTGGA 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACGCCTTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATCCTTGGCATGGGCTACAAGGAAAACGTGGA 814
Query 621 TTTATGGTCTGTGGGGTGCATTATGGGAGAAATGGTTTGCCACAAAATCCTCTTTCCAGGAAGGGACTATATTG 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTTATGGTCTGTGGGGTGCATTATGGGAGAAATGGTTTGCCACAAAATCCTCTTTCCAGGAAGGGACTATATTG 888
Query 695 ATCAGTGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTGAATTCATGAAGAAACTGCAACCAACAGTA 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCAGTGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTGAATTCATGAAGAAACTGCAACCAACAGTA 962
Query 769 AGGACTTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTTGAGAAACTCTTCCCTGATGTCCTTTTCCC 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGGACTTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTTGAGAAACTCTTCCCTGATGTCCTTTTCCC 1036
Query 843 AGCTGACTCAGAACACAACAAACTTAAAGCCAGTCAGGCAAGGGATTTGTTATCCAAAATGCTGGTAATAGATG 916
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGCTGACTCAGAACACAACAAACTTAA----AGTCAGGCAAGGGATTTGTTATCCAAAATGCTGGTAATAGATG 1106
Query 917 CATCTAAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACATCAATGTCTGGTATGATCCTTCTGAAGCA 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 CATCTAAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACATCAATGTCTGGTATGATCCTTCTGAAGCA 1180
Query 991 GAAGCTCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGGGAACACACAATAGAAGAGTGGAAAGAATT 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 GAAGCTCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGGGAACACACAATAGAAGAGTGGAAAGAATT 1254
Query 1065 GATATATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGGAGTTATACGGGGGCAGCCCTCTCCTTTAG 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 GATATATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGGAGTTATACGGGGGCAGCCCTCTCCTTTAG 1328
Query 1139 CACAGGTGCAGCAG------------------------------------------------------------ 1152
||||||||||||||
Sbjct 1329 CACAGGTGCAGCAGTGATCAATGGCTCTCAGCATCCATCATCATCGTCGTCTGTCAATGATGTGTCTTCAATGT 1402
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 1403 CAACAGATCCGACTTTGGCCTCTGATACAGACAGCAGTCTAGAAGCAGCAGCTGGGCCTCTGGGCTGCTGTAGA 1476
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 1477 TGACTACTTGGGCCATCGGGGGGTGGGAGGGATGGGGAGTCGGTTAGTCATTGATAGAACTACTTTGAAAACAA 1550
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 1551 TTCAGTGGTCTTATTTTTGGGTGATTTTTCAAAAAATGTAGAATTCATTTTGTAGTAAAGTAGTTTATTTTTTT 1624
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 1625 TAATTTCAAGTGATGTAATTTAAAACCTAAGTTGTGTTTCAAAACAGCAACAAAACTGTATTGTATTTTTTTTG 1698
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 1699 CTGTAATTAACTGTATAATGTAAACCTAATTATTTTATCATGGTTTAAATTTTTTGCATATTTGCTTTATCTTA 1772
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 1773 TGCTGCTGATTTTTTTAACTGAATTTGTAAGATTTTGTTTATCAAAGCAACTATTATGTGGTGACTTGCCTATA 1846
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 1847 TCATGAATTATTTAAGATTTTTATAGTTTTTTTTAATTAGAATTTATTTCAGATGTTTTGTTCATGATACTATC 1920
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 1921 CTTCAGGGTTATGTGCTTATCAATGAAATAACCCCAGAGGAGTGAGGGAAAATAACTTGTAGCCAGTTATATTC 1994
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 1995 AGGAATAACTACTGTAAATGATGAACGTGTTAGGAGACCTCCAATATTTGCTACTTGCCAATCCTAATTTAGTT 2068
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2069 ACAAGAATTGGTAGGCAATCCTACTTAATTTTGGCAAAAGCCCCGTCATCTAAATGGCAGAATAACTCAGAGCA 2142
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2143 TGTCTTTGAAGATGCTGGGCGTCTACCACCACCTTATGTCCCCACCCTACCCAACAAAAATAAGTAAAAAGAAT 2216
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2217 ATGGTGTATTCTACAAATTTGTGGCATGCTCAAAGTTTATGATCACATAAAGGCAAGAGGATACTTCATGAATA 2290
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2291 ATACATTTCAATGCAAATAAACAGATGGTTCACTTCTACTAGCTATGAGCCTGTTTTTGTATACACTGAGTTAA 2364
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2365 TCTACTCAGGCTGTAGGTCCCAGCAATGTTCTAGAGTCTGGTCTTTCCCTTTCCTGCAGCTTCGGGTCCTTGGA 2438
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2439 CCTTTCCTGTTTCCTATTACTTGGAGTGTCTGTCAGTTGAGCACCAGTTGTTCTGGTGTTTCATTTGATTCTAC 2512
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2513 TTGTAGCATAATCATTTATACGAGCTATTGGGAGGTTCCAAACCCTACCTAGATTTGTGTAGGTGATGTATCAA 2586
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2587 ATGAGCAATATACCGTTCATCTGAAAATAGTAGCACACAGCCATATATAGGATATCATTTTCTAAGGACTGTTT 2660
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2661 CTTCACATTGAGCAGAGCAGGCATAAATGGTGGTTATTTAGTCTAAGTCTTTTATTTTTTTATACCTGATTTTC 2734
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2735 AACATAACACGCAATGTGGATGTCGAGTAGTGTTAAGAATGGTGCTGCTCCTGACAAGTGTATGTTAACTGTTT 2808
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2809 ACATTTTCTATCTGTAGAATTATTTCTCTATTACTGAACTTTTCCTAAGTAAAATGTCTTTGAAGTCTCGTTAT 2882
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2883 TTCTGAAATACGTTGTCTGTAATAGACCCAGGCACCTTTTAAATTATCTCTGGAACAAGAGGGATTTCATGTAA 2956
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 2957 TGAACTAGGAAATGCATACTCACATAAGCAACAAGGTTCTAGGCAGAAAGCCCCTTGGAATTTGTGACCAACAG 3030
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3031 GAGCAAGAACAGGTGCGGCTCAACATGCAATGTCTGAAAATTTGCTTGGCATTTTATTCATATATTTAGTGCAA 3104
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3105 AATTATTTTTGAGTGAGATATTTTACATCACTGTTAATGTGCAATATTTAAGATTAAAATACATTAGCTTTTTT 3178
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3179 ATATACTTTGAAGTAGCAAGTTTGTTTTCGATGGCTTAGAGTCATGATTTCCAGCTTCCCAGCCTTTTTATCAG 3252
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3253 TCCCTTTTCTAATACAACAAGGTGCATTAATTTGATTAGGCAAATTAGAGTTCTAAGACACTTCTTGAATTGTA 3326
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3327 GACAGAAAATATTGGATTCACAATTTCAGCAGAAATTTGAGAATGAGTGTGTTTATATTAATTTCACAATTAGC 3400
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3401 TGTATTTTCTGTAGCATAGATTATGTCACTGTTGCACTTTCACAGCAGACATGCTTTCAGAAGGTTCTCATATT 3474
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3475 TTATGTTTGATTGCTGATAAGCCATCTCTATTGATACAGATTTTGGTTAAGTAAGGAAAACCAGGTGTGTGTCT 3548
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3549 GTATCATTTATTGTAAATGCCAGCTGCCACTTGCCAACCATCATGTTCAGTTCAATTCAAAGAAAACAAACTCT 3622
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3623 CATTACTTAGTGTAAACTAAAATACTTAACAAATTATATCCTAAAAACAAGGTCTCTTTGTTAAATGTTGCATG 3696
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3697 CCCTAGGTTTTAAATTACTACATCCAAATACAGTTTTCGTCTTAAATTTGTTAAGCTAAATATATGTTGGTTCT 3770
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3771 TTTTATTTTGGAATCCTTTAAGCATCTTAAACATTTTTTTTTTGAAGAGAAGTTACAAATAACATTTCTATCAG 3844
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3845 GTAGTACTTGTATGAAACCACCTTTCTTATTCTATAATTTTGATTTTTCAATTTTATATACTTAATATACTCAC 3918
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3919 TGTCTTACTATCAGAAAGTTATTTTGACCAAGATTTTTATTATCTTCATAGATTCAGAAAGAGATGCTAATTCT 3992
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 3993 GTACCAATGTCTTCCTGGTTACTATTCTCTTCCCTCTAATATATACTGGCCATTTGTAAAACCATTGTGTTGTT 4066
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4067 GGGATCACTTAGTTATACTATACGCAGATAGAGCATCTCAACTCTGTCATAGTGTTTGCTGAACAGTTTTCAGT 4140
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4141 GTCATGCACCTTTGGCTGCTAATTGTTCCTGACGTGCACTCTTCCGAGTTGGTAAAGGCACAGTGTGTTCATGC 4214
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4215 CAGACTTCTAAGAGAAACACCAGCCTCTTAAATCAGAAGCCTACACACAACCCCCTTAACAATCCAAAGAAGCT 4288
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4289 TGATGGTGTGCAAAGAAGCATCCTGCCAGCCTTGTCATTGTTCTGTTCTATGCTAATCCTGCTGTGTTGTCTAA 4362
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4363 AAGATGGAGGGAAGAGGACATCAGTGTCTGATAGTGAAATCATCAGCAGGAAAGTGAAGCTCTTTCCTTGGTTA 4436
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4437 CAGATAAGACTTGGTTTACACTATTGGCCAGTATCTGCTAAACATATGAAGACTTAACTATTCAGTGTTGCCTA 4510
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4511 GGCATTCGCCTGCACAACATTTTGAGGTTAGAACATAGAATATTTTCAGAAATACTGTTGTAGTTTGTGAGTGT 4584
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4585 TGTTCATTAGTTACACATTAGCTATAGAGTGGATGCATGAAGCCCCATGACACCAGTAAACTTCTCTTACCAGT 4658
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4659 AGGTAAACCAAACACCATTCTGTCATTAGCAGCCCTCTTAAATGTTGCCTCTCCGTATCCTGTTGCATTTTTGT 4732
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4733 GTGCATTGTGTTTCTACTGATCTCTCTTAGGTTTTTACGGAATCAAAGGAAACTAATTTTTCCTTAATAGCAAG 4806
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4807 AAAGATGAAGAGGTAAAGGGCATTGAAGCAGAAATGTATAGTTTGGGGTACGATTAGAAAACTCGTAAGGAAAA 4880
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4881 CAGAAGTCCTAATTTCAAACTGACTGCTCTTCGTTAAGTGCTCTTAAGGAGAGTCTAGTAACAGTAACACTTTC 4954
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 4955 TGGCCATTTCTAGTTTAGATTCTCTTCGTTACTGAAACTTTTGAGAAATATTACCTGTGGATTAATTTTGCACA 5028
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 5029 ATGTTCTATTCTCATAATGACTTACAAATTAAACTAGGTTTTTATTGAACTACCTCACACTAATTTTCTATGCT 5102
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 5103 TTCCCAAGTAAGCTGTTGCCCTGTTAGATCTTTACTGAGTGAATTATAAATGTGTGTTAAATACTTTCTAGCCA 5176
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 5177 ATGTTGACACAATACCAGTAAGTATGTAAAGTATATACCTTACATCAGTAAGAGACACGTGTAAAATCTTTGAC 5250
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 5251 TGTATGTCTTGCAAAATTGTGCTCGTTGACATTATTACTGTTTTTGTAAGTAGAAACCTGCTCGTGATATCGGT 5324
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 5325 CCATTTACATTTTACAAAAGGAGTAAATCTTAGTAAAAATTTTACGAAGAAATAAATTACTTTTGTAGGCCCAA 5398
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 5399 TATTTGGTATATTTTTGAGAAGCTGTTAATCTTTTAGCTGAATAATGAAGTTAGACTGAATTACGTGTCTCCCT 5472
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 5473 GGACTGTGACATCTATTTTCTCATTACAGTTTATCCTGGTCAGCAGGGTGTCACACCTGGAAACCTGAGTATGA 5546
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 5547 TAGCTGACATTTGCTTTTCTCCCTCTGCGATGTCATTCCTCCTCCATTCCTCTCCTTCCCTGTGTTCCGTTCCC 5620
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 5621 TCTCCTTTCCTCTAGACAAAACAAAATGGGGCACTTTTTAGGGAATGCTGAGATCATTATTGTGGTTTTTCATC 5694
Query 1153 -------------------------------------------------------------------------- 1152
Sbjct 5695 ATTCATGCCCTAGTCATTAAACATGCACCACTGGAATGTAAACAATGTTATCTAGTATGTCAATTGGTTATAAT 5768
Query 1153 ------------------------------------------ 1152
Sbjct 5769 ATTTTAAATAAAAAAGAAAAAAGTGGTATGAAAATTATGAAA 5810
