Nucleotide Global Alignment

Description

• Query: TRCN0000489471
• Subject: XM_030254516.1
• Aligned Length: 1401
• Identities: 896
• Gaps: 258

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACCTTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA  74

Query    1  ----------------------------------------ATGAGCAGAAGCAAGCGT-GACAACAATTTTTAT  33
                                                    |||||||.||||||| || ||||||.|.||.||.
Sbjct   75  TAAACACGTGGATGTGTCATCTATTGCCAAACATTACAACATGAGCAAAAGCAAG-GTGGACAACCAGTTCTAC  147

Query   34  AGTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACGATATCAGAATTTAAAACCTATAGGCTCAGGAGC  107
            |||||.||..|.||.||.||.||.|||||.||.||.||.||.||.|||||..|.||.||.||.|||||.||.||
Sbjct  148  AGTGTGGAAGTGGGGGACTCAACCTTCACCGTTCTTAAGCGCTACCAGAACCTGAAGCCAATTGGCTCTGGGGC  221

Query  108  TCAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTAAGCCGACCAT  181
            |||.||||||||.||.||.||.||.||.||..|.|||||.||||||||.||.||.||||||||.|||.||||.|
Sbjct  222  TCAGGGAATAGTCTGTGCTGCGTACGACGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCT  295

Query  182  TTCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTAGTTCTTATGAAATGTGTTAATCACAAAAATATA  255
            |.|||||.||.|||||.||||||.||||.|||.|.|||||.||.||.|||||.|||||.||.||.|||||.||.
Sbjct  296  TCCAGAACCAAACTCACGCCAAGAGGGCTTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATT  369

Query  256  ATTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATGGAGCT  329
            |||.||.|.||.||||||||.|||||.||||||.|.||.||.||.||.||||||||.|||.||||.|||||.||
Sbjct  370  ATTAGCTTATTAAATGTTTTTACACCCCAGAAAACACTGGAGGAGTTCCAAGATGTCTACTTAGTGATGGAACT  443

Query  330  CATGGATGCAAATCTTTGCCAAGTGATTCAGATGGAGCTAGATCATGAAAGAATGTCCTACCTTCTCTATCAGA  403
            .|||||.||.||.||.||.||.|||||||||||||||||.||.||.||..|.|||||.|||.|.||.||.||||
Sbjct  444  GATGGACGCCAACCTGTGTCAGGTGATTCAGATGGAGCTGGACCACGAGCGGATGTCTTACTTGCTGTACCAGA  517

Query  404  TGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTATTCATCGGGACTTAAAGCCCAGTAATATAGTAGTA  477
            ||||||||||.|||||||||||.||.||.|||||.||.||.||..||||||||||.||||||||.||.|||||.
Sbjct  518  TGCTGTGTGGCATCAAGCACCTCCACTCCGCTGGGATCATCCACAGGGACTTAAAACCCAGTAACATTGTAGTC  591

Query  478  AAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGGCCAGGACTGCAGGAACGAGTTTTATGATGACGCC  551
            ||.|||||||||||..||||.||.||.||||||||.|||||||||||.||.||.||.||.||.||||||||.||
Sbjct  592  AAGTCTGATTGCACACTGAAAATCCTCGACTTCGGACTGGCCAGGACAGCGGGTACAAGCTTCATGATGACTCC  665

Query  552  TTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATCCTTGGCATGGGCTACAAGGAAAACGTGGATTTAT  625
            .|||||.|||||.||.||.||||||||.||.|||||||||||.|||||||||||||||||.||||||||..|||
Sbjct  666  GTATGTGGTGACGCGATATTACAGAGCCCCTGAGGTCATCCTGGGCATGGGCTACAAGGAGAACGTGGACATAT  739

Query  626  GGTCTGTGGGGTGCATTATGGGAGAAATGGTTTGCCACAAAATCCTCTTTCCAGGAAGGGACTATATTGATCAG  699
            ||||||||||.|||||.|||||||||||||||.|||||||||||||||||||.|||||||||||||||||.|||
Sbjct  740  GGTCTGTGGGATGCATCATGGGAGAAATGGTTCGCCACAAAATCCTCTTTCCCGGAAGGGACTATATTGACCAG  813

Query  700  TGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTGAATTCATGAAGAAACTGCAACCAACAGTAAGGAC  773
            |||||.|||||.||.||.|||||.|||||.||.|||||.||.||||||||||||.||||.||.|||||.||.|.
Sbjct  814  TGGAACAAAGTCATCGAGCAGCTAGGAACTCCGTGTCCAGAGTTCATGAAGAAATTGCAGCCCACAGTCAGAAA  887

Query  774  TTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTTGAGAAACTCTTCCCTGATGTCCTTTTCCCAGCTG  847
            .|||||.||.||..|.||.||.||.||.|||...|.|||....||.|||||.||.|||..|||.||||||||.|
Sbjct  888  CTACGTGGAGAATCGGCCCAAGTACGCAGGACTCACCTTCCCCAAGCTCTTTCCAGATTCCCTCTTCCCAGCGG  961

Query  848  ACTCAGAACACAACAAACTTAAAGCCAGTCAGGCAAGGGATTTGTTATCCAAAATGCTGGTAATAGATGCATCT  921
            |.||.||.|||||.||||||||||||||.||.||.|||||||||||.||.||.|||.|.||.||.||..||.|.
Sbjct  962  ATTCTGAGCACAATAAACTTAAAGCCAGCCAAGCCAGGGATTTGTTGTCTAAGATGTTAGTGATTGACCCAGCG  1035

Query  922  AAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACATCAATGTCTGGTATGATCCTTCTGAAGCAGAAGC  995
            ||.|||||.||.||.||.||.||.||.||.||.|||||||||||.||.|||||.||.||..||||||..||.||
Sbjct 1036  AAGAGGATATCGGTGGACGACGCACTGCAGCATCCGTACATCAACGTTTGGTACGACCCGGCTGAAGTGGAGGC  1109

Query  996  TCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGGGAACACACAATAGAAGAGTGGAAAGAATTGATAT  1069
            .||.||.||..||||...|||.||||||.|.|||||||||||.|||||.||.|||||.|||||||||.|.||.|
Sbjct 1110  GCCTCCGCCTCAGATATATGATAAGCAGCTGGATGAAAGGGAGCACACCATCGAAGAATGGAAAGAACTTATCT  1183

Query 1070  ATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGG---AGTTATACGGGGGCAGCCCTCTCCTTTAGCA  1140
            |.|||||.||.|||.|||..||.||||..||.||||||||   |||.|.|   ||.||||||||.||||     
Sbjct 1184  ACAAGGAGGTAATGAACTCAGAAGAGAAGACTAAGAATGGCGTAGTCAAA---GGCCAGCCCTCGCCTT-----  1249

Query 1141  CAGGTGCAGCAG--------------------------------------------------------------  1152
            ||||||||||||                                                              
Sbjct 1250  CAGGTGCAGCAGTGAACAGCAGTGAGAGTCTCCCTCCATCCTCGTCTGTCAACGACATCTCCTCCATGTCCACC  1323

Query 1153  ---------------------------------------------------------------------  1152
                                                                                 
Sbjct 1324  GACCAGACCCTCGCATCTGACACTGACAGCAGCCTGGAGGCCTCGGCGGGACCGTTGGGTTGTTGCAGG  1392