Nucleotide Global Alignment
Description
- Query:
- TRCN0000489474
- Subject:
- XM_006509021.2
- Aligned Length:
- 2280
- Identities:
- 1441
- Gaps:
- 663
Alignment
Query 1 ATGAGCTGGTCACCTTCCCTGACAACGCAGACATGTGGGGCCTGGGAAATGAAAGAGCGCCTTGGGACAGGGGG 74
||||||||||||||.|||||..||||.|||||||||||.|||||||||||||||||.|||||.|||||.|||||
Sbjct 1 ATGAGCTGGTCACCGTCCCTCCCAACCCAGACATGTGGAGCCTGGGAAATGAAAGAACGCCTGGGGACCGGGGG 74
Query 75 ATTTGGAAATGTCATCCGATGGCACAATCAGGAAACAGGTGAGCAGATTGCCATCAAGCAGTGCCGGCAGGAGC 148
|||||||||.||||||||.|||||||||||||..||||||||.|||||.|||||||||||.|||||.|||||||
Sbjct 75 ATTTGGAAACGTCATCCGGTGGCACAATCAGGCGACAGGTGAACAGATCGCCATCAAGCAATGCCGACAGGAGC 148
Query 149 TCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGATCCAGATCATGAGAAGGCTGACCCACCCCAATGTGGTG 222
|||||||...||||.||||.||.||||||||.||.||||||||||||||||||||||.|||.||||||||||||
Sbjct 149 TCAGCCCAAAGAACAGAGACCGCTGGTGCCTCGAAATCCAGATCATGAGAAGGCTGAACCATCCCAATGTGGTG 222
Query 223 GCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTGGCGCCCAATGACCTGCCCCTGCTGGCCATGGAGTACTG 296
||||||||.||||||||.|||||||||||||||.||||.||||||||..||||.||||||||||||||||||||
Sbjct 223 GCTGCCCGGGATGTCCCAGAGGGGATGCAGAACCTGGCACCCAATGATTTGCCACTGCTGGCCATGGAGTACTG 296
Query 297 CCAAGGAGGAGATCTCCGGAAG-TACCTGAACCAGTTTGAGAACTGCTGTGGTCTGCGGGAAGGTGCCATCCTC 369
||||||||||||||||| |||| |||.||||||||||.||||||||||||||.|||||||||||.||..||||.
Sbjct 297 CCAAGGAGGAGATCTCC-GAAGATACTTGAACCAGTTCGAGAACTGCTGTGGCCTGCGGGAAGGAGCTGTCCTT 369
Query 370 ACCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACCTTCATGAAAACAGAATCATCCATCGGGATCTAAAGCC 443
|||.|||||||||||||.||.||.||.||||||||||||||.||||||||||||||||||||.||.||.|||||
Sbjct 370 ACCCTGCTGAGTGACATCGCATCGGCTCTTAGATACCTTCACGAAAACAGAATCATCCATCGAGACCTGAAGCC 443
Query 444 AGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAATTATTGACCTAGGATATGCCAAGGAGC 517
||||||||||||.||||||||||||||..|.||.||||||||||||||||||||.|||||||||||||||||||
Sbjct 444 AGAAAACATCGTTCTGCAGCAAGGAGAGAAAAGATTAATACACAAAATTATTGATCTAGGATATGCCAAGGAGC 517
Query 518 TGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACCTGGCCCCAGAGCTACTGGAGCAGCAG 591
||||||||||||||||.|||||.|||||.||||||||.|||||.||||||||.||||||||.||||||||||||
Sbjct 518 TGGATCAGGGCAGTCTGTGCACGTCATTTGTGGGGACTCTGCAATACCTGGCGCCAGAGCTTCTGGAGCAGCAG 591
Query 592 AAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTTTGAGTGCATCACGGGCTTCCGGCCCTT 665
||||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||.||||||||||||||
Sbjct 592 AAGTACACCGTGACCGTTGACTACTGGAGCTTCGGCACCCTGGCCTTCGAGTGCATCACTGGCTTCCGGCCCTT 665
Query 666 CCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCG 739
||||||.|||||||||||.|||||||||||.||.|||||.|||||||||||.||.||||||||.||||||||.|
Sbjct 666 CCTCCCTAACTGGCAGCCTGTGCAGTGGCACTCCAAAGTCCGGCAGAAGAGCGAAGTGGACATCGTTGTTAGTG 739
Query 740 AAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATCTTAACAGTGTCCTGGCTGAG 813
||||||||||||||.|.||||||||||||||.||..||||||.||||||||||||||||||||||.|||||||.
Sbjct 740 AAGACTTGAATGGAGCAGTGAAGTTTTCAAGTTCGCTACCCTTCCCCAATAATCTTAACAGTGTCTTGGCTGAA 813
Query 814 CGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGCACGGATCCCACGTATGGGCC 887
||.|||||||||||||||||.||||||||.|||||||||||.||.||.|||||||||||||||..||||||.||
Sbjct 814 CGGCTGGAGAAGTGGCTGCAGCTGATGCTTATGTGGCACCCTCGGCAAAGGGGCACGGATCCCCAGTATGGCCC 887
Query 888 CAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATATCTTGAACATGGTCACGGGCA 961
|||.||||||||||..|||||||||||||||||.|||||.||||||||||||.||||||||||||||||.||||
Sbjct 888 CAACGGCTGCTTCAGAGCCCTGGATGACATCTTGAACTTGAAGCTGGTTCATGTCTTGAACATGGTCACAGGCA 961
Query 962 CCATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCAGAATCCAACAGGACACGGGC 1035
||.|.|||||.|||||.|||||.|||||||||||||||||||||||.||..||||||||||..|.||||||||.
Sbjct 962 CCGTTCACACATACCCCGTGACGGAGGATGAGAGTCTGCAGAGCTTAAAAACCAGAATCCAGGAAGACACGGGG 1035
Query 1036 ATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCCGATAAGCCTGCCACTCAGTG 1109
||||..|||...|||||||||||||||||.||.||.||.||||.|.||.||||.||.||||||||.||||||||
Sbjct 1036 ATCCTGGAGACAGACCAGGAGCTGCTGCAAGAGGCAGGGCTGGTGCTGCTCCCTGACAAGCCTGCTACTCAGTG 1109
Query 1110 TATTTCAGACGGCAAGTTAAATGAGGGCCACACATTGGACATGGATCTTGTTTTTCTCTTTGACAACAGTAAAA 1183
.||.||||||.|||||..|||.|||||||.|||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 CATCTCAGACAGCAAGACAAACGAGGGCCTCACGTTGGACATGGATCTTGTTTTTCTCTTTGACAACAGTAAAA 1183
Query 1184 TCACCTATGAGACTCAGATCTCCCCACGGCCCCAACCTGAAAGTGTCAGCTGTATCCTTCAAGAGCCCAAGAGG 1257
|||.||||||||||||||||.||||.||.||||||||.|||||||||||||||||||||||.|||||||||.||
Sbjct 1184 TCAACTATGAGACTCAGATCACCCCCCGACCCCAACCGGAAAGTGTCAGCTGTATCCTTCAGGAGCCCAAGCGG 1257
Query 1258 AATCTCGCCTTCTTCCAGCTGAGGAAGGTGTGGGGCCAGGTCTGGCACAGCATCCAGACCCTGAAGGAAGATTG 1331
||.|||.|||||||||||||||||||.|||||||||||.||||||||||||||||||||.|||||||||||.||
Sbjct 1258 AACCTCTCCTTCTTCCAGCTGAGGAAAGTGTGGGGCCAAGTCTGGCACAGCATCCAGACGCTGAAGGAAGACTG 1331
Query 1332 CAACCGGCTGCAGCAGGGACAGCGAGCCGCCATGATGAATCTCCTCCGAAACAACAGCTGCCTCTCCAAAATGA 1405
.||||||||||||||||||||||||||.||||||||||.|||||||||.||.||||||||||||||.||.||||
Sbjct 1332 TAACCGGCTGCAGCAGGGACAGCGAGCAGCCATGATGAGTCTCCTCCGGAATAACAGCTGCCTCTCTAAGATGA 1405
Query 1406 AGAATTCCATGGCTTCCATGTCTCAGCAGCTCAAGGCCAAGTTGGATTTCTTCAAAACCAGCATCCAGATTGAC 1479
||||..|||||||.||||.|.|.||||||||||||||||||.||||.|||||||||||||||||||||||.|||
Sbjct 1406 AGAACGCCATGGCCTCCACGGCCCAGCAGCTCAAGGCCAAGCTGGACTTCTTCAAAACCAGCATCCAGATCGAC 1479
Query 1480 CTGGAGAAGTACAGCGAGCAAACCGAGTTTGGGATCACATCAGATAAACTGCTGCTGGCCTGGAGGGAAATGGA 1553
|||||||||||.|..|||||.|||||||||||||||||.|||||||||.||||||||||.|||.||||.|||||
Sbjct 1480 CTGGAGAAGTATAAAGAGCAGACCGAGTTTGGGATCACCTCAGATAAATTGCTGCTGGCTTGGCGGGAGATGGA 1553
Query 1554 GCAGGCTGTGGAGCTCTGTGGGCGGGAGAACGAAGTGAAACTCCTGGTAGAACGGATGATGGCTCTG-----CA 1622
||||||||||||||..||||||||||| || || ||||| ||
Sbjct 1554 GCAGGCTGTGGAGCAGTGTGGGCGGGA--------TG-----CC------------------CTCTGTCCATCA 1596
Query 1623 GACCGACATTGTGGACTTACA-GAG--GAGC---CCCATGGGCCGGAAGCAGGGGGGAACGCTGGACGACCTAG 1690
| |||| || ||| .||| ||||| || ||.|||
Sbjct 1597 G---------GTGG-----CATGAGCACAGCTTTCCCAT----------CA--GGAGAA--------------- 1629
Query 1691 AGGAGCAAGCAAGGGAGCTGTACAGGAGACTAAGGGAAAAACCTCGAGACCAGCGAACTGAGGGTGACAGTCAG 1764
Sbjct 1630 -------------------------------------------------------------------------- 1629
Query 1765 GAAATGGTACGGCTGCTGCTTCAGGCAATTCAGAGCTTCGAGAAGAAAGTGCGAGTGATCTATACGCAGCTCAG 1838
Sbjct 1630 -------------------------------------------------------------------------- 1629
Query 1839 TAAAACTGTGGTTTGCAAGCAGAAGGCGCTGGAACTGTTGCCCAAGGTGGAAGAGGTGGTGAGCTTAATGAATG 1912
Sbjct 1630 -------------------------------------------------------------------------- 1629
Query 1913 AGGATGAGAAGACTGTTGTCCGGCTGCAGGAGAAGCGGCAGAAGGAGCTCTGGAATCTCCTGAAGATTGCTTGT 1986
Sbjct 1630 -------------------------------------------------------------------------- 1629
Query 1987 AGCAAGGTCCGTGGTCCTGTCAGTGGAAGCCCGGATAGCATGAATGCCTCTCGACTTAGCCAGCCTGGGCAGCT 2060
Sbjct 1630 -------------------------------------------------------------------------- 1629
Query 2061 GATGTCTCAGCCCTCCACGGCCTCCAACAGCTTACCTGAGCCAGCCAAGAAGAGTGAAGAACTGGTGGCTGAAG 2134
Sbjct 1630 -------------------------------------------------------------------------- 1629
Query 2135 CACATAACCTCTGCACCCTGCTAGAAAATGCCATACAGGACACTGTGAGGGAACAAGACCAGAGTTTCACGGCC 2208
Sbjct 1630 -------------------------------------------------------------------------- 1629
Query 2209 CTAGACTGGAGCTGGTTACAGACGGAAGAAGAAGAGCACAGCTGCCTGGAGCAGGCCTCA 2268
Sbjct 1630 ------------------------------------------------------------ 1629
