Nucleotide Global Alignment
Description
- Query:
- TRCN0000489474
- Subject:
- XR_949402.3
- Aligned Length:
- 4503
- Identities:
- 2111
- Gaps:
- 2392
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGATGAACGATGAACCTCAGGCTGAGCGCCTCACGGTTTCCTCATGTCACCGGGGCTGGGGGTGCAGTTTGGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCACACTGCTAGGTCTTTTCTTGTTTTTAAGGGGGCAGGGGCTGTCACCTCTGAGGAGTCAGCTGTGATTGATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTCTCCACACCCAGCCAAGCACCCCCCAGACAGGGGAGCGCCCGCAGTAGGGCGGTAGGCAAGGGCAGTTCTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCAACAGTCCCTAAATCATCCCAGCGGGGGCGCGGGAAATTCCACCGAGGTGAAAGCCTAGGGGGCCGGGTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAAATCCCCATACCCGGGCCCAGAAACCGCTCCAGGTGGAAGTAACTTGTCTAAAGAGAACAGGGTGTAACGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGTCATTTCAGGGCTGTTCTTTTAAATCGGTGAGCACGGTCTGTCTACTTTCCCTCAGTTGTCTAGAGACCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACGCCACCCCCGCCCCGGGGGAGTCGCCCGGTCGAGGGTCCCGGGACAGGCGCAGCACTCGCAGCATCCGGACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGTCTGCCTCGCGCCGGGAGCGGCCTCTTTAAGAGCGGCCGCGGCCAACGTGCTCCGTGACGTCAGAGCAGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGTGTTTGAGGAAGTCGCGCCGCGCTGCCCGCGTTAAGATTCCCGCATTTTAATGTTTTCAGGGGGGTGTCATA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCCCGGGTTTGGCCGCCCCAGCCCCGCCTTCCCCGCCCCGGGGAGCCCGCCCCCTGCCCCGCGTCCCTGCCGA 740
Query 1 ---------------------ATGAGCTGGTCACCTTCCCTGACAACGCAGACATGTGGGGCCTGGGAAATGAA 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGAGTTAGCACGACATCAGTATGAGCTGGTCACCTTCCCTGACAACGCAGACATGTGGGGCCTGGGAAATGAA 814
Query 54 AGAGCGCCTTGGGACAGGGGGATTTGGAAATGTCATCCGATGGCACAATCAGGAAACAGGTGAGCAGATTGCCA 127
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGAGCGCCTTGGGACAGGGGGATTTGGAAATGTCATCCGATGGCACAATC------------------------ 864
Query 128 TCAAGCAGTGCCGGCAGGAGCTCAGCCCCCGGAACCGAGAGCGGTGGTGCCTGGAGATCCAGATCATGAGAAGG 201
|||
Sbjct 865 -----------------------------------------------------------------------AGG 867
Query 202 CTGACCCACCCCAATGTGGTGGCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTGGCGCCCAATGACCTGCC 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 868 CTGACCCACCCCAATGTGGTGGCTGCCCGAGATGTCCCTGAGGGGATGCAGAACTTGGCGCCCAATGACCTGCC 941
Query 276 CCTGCTGGCCATGGAGTACTGCCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTTTGAGAACTGCTGTGGTC 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 CCTGCTGGCCATGGAGTACTGCCAAGGAGGAGATCTCCGGAAGTACCTGAACCAGTTTGAGAACTGCTGTGGTC 1015
Query 350 TGCGGGAAGGTGCCATCCTCACCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACCTTCATGAAAACAGAATC 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 TGCGGGAAGGTGCCATCCTCACCTTGCTGAGTGACATTGCCTCTGCGCTTAGATACCTTCATGAAAACAGAATC 1089
Query 424 ATCCATCGGGATCTAAAGCCAGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAATTATTGA 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090 ATCCATCGGGATCTAAAGCCAGAAAACATCGTCCTGCAGCAAGGAGAACAGAGGTTAATACACAAAATTATTGA 1163
Query 498 CCTAGGATATGCCAAGGAGCTGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACCTGGCCC 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164 CCTAGGATATGCCAAGGAGCTGGATCAGGGCAGTCTTTGCACATCATTCGTGGGGACCCTGCAGTACCTGGCCC 1237
Query 572 CAGAGCTACTGGAGCAGCAGAAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTTTGAGTGC 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238 CAGAGCTACTGGAGCAGCAGAAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTTTGAGTGC 1311
Query 646 ATCACGGGCTTCCGGCCCTTCCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGAAGAGTGA 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312 ATCACGGGCTTCCGGCCCTTCCTCCCCAACTGGCAGCCCGTGCAGTGGCATTCAAAAGTGCGGCAGAAGAGTGA 1385
Query 720 GGTGGACATTGTTGTTAGCGAAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATC 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1386 GGTGGACATTGTTGTTAGCGAAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATC 1459
Query 794 TTAACAGTGTCCTGGCTGAGCGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGC 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1460 TTAACAGTGTCCTGGCTGAGCGACTGGAGAAGTGGCTGCAACTGATGCTGATGTGGCACCCCCGACAGAGGGGC 1533
Query 868 ACGGATCCCACGTATGGGCCCAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATAT 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1534 ACGGATCCCACGTATGGGCCCAATGGCTGCTTCAAGGCCCTGGATGACATCTTAAACTTAAAGCTGGTTCATAT 1607
Query 942 CTTGAACATGGTCACGGGCACCATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCA 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1608 CTTGAACATGGTCACGGGCACCATCCACACCTACCCTGTGACAGAGGATGAGAGTCTGCAGAGCTTGAAGGCCA 1681
Query 1016 GAATCCAACAGGACACGGGCATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCC 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1682 GAATCCAACAGGACACGGGCATCCCAGAGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTGATCCCC 1755
Query 1090 GATAAGCCTGCCACTCAGTGTATTTCAGACGGCAAGTTAAATGAGGGCCACACATTGGACATGGATCTTGTTTT 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1756 GATAAGCCTGCCACTCAGTGTATTTCAGACGGCAAGTTAAATGAGGGCCACACATTGGACATGGATCTTGTTTT 1829
Query 1164 TCTCTTTGACAACAGTAAAATCACCTATGAGACTCAGATCTCCCCACGGCCCCAACCTGAAAGTGTCAGCTGTA 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1830 TCTCTTTGACAACAGTAAAATCACCTATGAGACTCAGATCTCCCCACGGCCCCAACCTGAAAGTGTCAGCTGTA 1903
Query 1238 TCCTTCAAGAGCCCAAGAGGAATCTCGCCTTCTTCCAGCTGAGGAAGGTGTGGGGCCAGGTCTGGCACAGCATC 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1904 TCCTTCAAGAGCCCAAGAGGAATCTCGCCTTCTTCCAGCTGAGGAAGGTGTGGGGCCAGGTCTGGCACAGCATC 1977
Query 1312 CAGACCCTGAAGGAAGATTGCAACCGGCTGCAGCAGGGACAGCGAGCCGCCATGATGAATCTCCTCCGAAACAA 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1978 CAGACCCTGAAGGAAGATTGCAACCGGCTGCAGCAGGGACAGCGAGCCGCCATGATGAATCTCCTCCGAAACAA 2051
Query 1386 CAGCTGCCTCTCCAAAATGAAGAATTCCATGGCTTCCATGTCTCAGCAGCTCAAGGCCAAGTTGGATTTCTTCA 1459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2052 CAGCTGCCTCTCCAAAATGAAGAATTCCATGGCTTCCATGTCTCAGCAGCTCAAGGCCAAGTTGGATTTCTTCA 2125
Query 1460 AAACCAGCATCCAGATTGACCTGGAGAAGTACAGCGAGCAAACCGAGTTTGGGATCACATCAGATAAACTGCTG 1533
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2126 AAACCAGCATCCAGATTGACCTGGAGAAGTACAGCGAGCAAACCGAGTTTGGGATCA----------------- 2182
Query 1534 CTGGCCTGGAGGGAAATGGAGCAGGCTGTGGAGCTCTGTGGGCGGGAGAACGAAGTGAAACTCCTGGTAGAACG 1607
|||||||||||||||||||||||||||||
Sbjct 2183 ---------------------------------------------GAGAACGAAGTGAAACTCCTGGTAGAACG 2211
Query 1608 GATGATGGCTCTGCAGACCGACATTGTGGACTTACAGAGGAGCCCCATGGGCCGGAAGCAGGGGGGAACGCTGG 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2212 GATGATGGCTCTGCAGACCGACATTGTGGACTTACAGAGGAGCCCCATGGGCCGGAAGCAGGGGGGAACGCTGG 2285
Query 1682 ACGACCTAGAGGAGCAAGCAAGGGAGCTGTACAGGAGACTAAGGGAAAAACCTCGAGACCAGCGAACTGAGGGT 1755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2286 ACGACCTAGAGGAGCAAGCAAGGGAGCTGTACAGGAGACTAAGGGAAAAACCTCGAGACCAGCGAACTGAGGGT 2359
Query 1756 GACAGTCAGGAAATGGTACGGCTGCTGCTTCAGGCAATTCAGAGCTTCGAGAAGAAAGTGCGAGTGATCTATAC 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2360 GACAGTCAGGAAATGGTACGGCTGCTGCTTCAGGCAATTCAGAGCTTCGAGAAGAAAGTGCGAGTGATCTATAC 2433
Query 1830 GCAGCTCAGTAAAACTGTGGTTTGCAAGCAGAAGGCGCTGGAACTGTTGCCCAAGGTGGAAGAGGTGGTGAGCT 1903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2434 GCAGCTCAGTAAAACTGTGGTTTGCAAGCAGAAGGCGCTGGAACTGTTGCCCAAGGTGGAAGAGGTGGTGAGCT 2507
Query 1904 TAATGAATGAGGATGAGAAGACTGTTGTCCGGCTGCAGGAGAAGCGGCAGAAGGAGCTCTGGAATCTCCTGAAG 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2508 TAATGAATGAGGATGAGAAGACTGTTGTCCGGCTGCAGGAGAAGCGGCAGAAGGAGCTCTGGAATCTCCTGAAG 2581
Query 1978 ATTGCTTGTAGCAAGGTCCGTGGTCCTGTCAGTGGAAGCCCGGATAGCATGAATGCCTCTCGACTTAGCCAGCC 2051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2582 ATTGCTTGTAGCAAGGTCCGTGGTCCTGTCAGTGGAAGCCCGGATAGCATGAATGCCTCTCGACTTAGCCAGCC 2655
Query 2052 TGGGCAGCTGATGTCTCAGCCCTCCACGGCCTCCAACAGCTTACCTGAGCCAGCCAAGAAGAGTGAAGAACTGG 2125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2656 TGGGCAGCTGATGTCTCAGCCCTCCACGGCCTCCAACAGCTTACCTGAGCCAGCCAAGAAGAGTGAAGAACTGG 2729
Query 2126 TGGCTGAAGCACATAACCTCTGCACCCTGCTAGAAAATGCCATACAGGACACTGTGAGGGAACAAGACCAGAGT 2199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2730 TGGCTGAAGCACATAACCTCTGCACCCTGCTAGAAAATGCCATACAGGACACTGTGAGGGAACAAGACCAGAGT 2803
Query 2200 TTCACGGCCCTAGACTGGAGCTGGTTACAGACGGAAGAAGAAGAGCACAGCTGCCTGGAGCAGGCCTCA----- 2268
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2804 TTCACGGCCCTAGACTGGAGCTGGTTACAGACGGAAGAAGAAGAGCACAGCTGCCTGGAGCAGGCCTCATGATG 2877
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 2878 TGGGGGGACTCGACCCCCTGACATGGGGCAGCCCATAGCAGGCCTTGTGCAGTGGGGGGACTCGACCCCCTGAC 2951
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 2952 ATGGGGCTGCCTGGAGCAGGCCGCGTGACGTGGGGCTGCCTGGCCGCGGCTCTCACATGGTGGTTCCTGCTGCA 3025
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3026 CTGATGGCCCAGGGGTCTCTGGTATCCAGATGGAGCTCTCGCTTCCTCAGCAGCTGTGACTTTCACCCAGGACC 3099
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3100 CAGGACGCAGCCCTCCGTGGGCACTGCCGGCGCCTTGTCTGCACACTGGAGGTCCTCCATTACAGAGGCCCAGC 3173
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3174 GCACATCGCTGGCCCCACAAACGTTCAGGGGTACAGCCATGGCAGCTCCTTCCTCTGCCGTGAGAAAAGTGCTT 3247
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3248 GGAGTACGGTTTGCCACACACGTGACTGGACAGTGTCCAATTCAAATCTTTCAGGGCAGAGTCCGAGCAGCGCT 3321
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3322 TGGTGACAGCCTGTCCTCTCCTGCTCTCCAAAGGCCCTGCTCCCTGTCCTCTCTCACTTTACAGCTTGTGTTTC 3395
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3396 TTCTGGATTCAGCTTCTCCTAAACAGACAGTTTAATTATAGTTGCGGCCTGGCCCCATCCTCACTTCCTCTTTT 3469
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3470 TATTTCACTGCTGCTAAAATTGTGTTTTTACCTACTACTTTGGTGGTTGTCCTCTTTTCGGCAAAGTTGGAGCG 3543
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3544 AGTGCCAAGCTCTCCATCTGTGGTCCTTTCTGCCAAGAGCGACTCATAGTAACCAGGATGGGAGAGCAGCTGCC 3617
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3618 TTATTCTGAATCCCAAAAATTACTTGGGGGTGATTGTCACAGAGGAGGGACAGAAAGGGTATCTGCTGACCACC 3691
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3692 AGCCTGCCTACCCATGCCCATGTCTCCATTCCTGCTCAAGCGTGTGTGCTGGGCCGGGGAGTCCCTGTCTCTCA 3765
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3766 CAGCATCTAGCAGTATTATTAAATGGATTCATTTTAAAAATAGCTCCTATATTTTGTAACATGTCTCAAACACT 3839
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3840 CATACTGGGTTCCACAATCCACTGTTAGAATACCTATGGTTAGGGCTTCTGAACTAAAATAATGGAAAATTTTA 3913
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3914 ACAATTTGTATAGTGCCTGGATCATTACTAGTGCCATAACCCTGCTTCTTCAACATTTCACAGAACTTCTCTTT 3987
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 3988 TATATAAAGGCAAGAGCACAAAATGAGTTCAGATGATCACAAACAGGTGAGTTTTGTTGGAGAAGAAAGTTGGA 4061
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 4062 GTAGGAGACTTTCACAAGTGGTTTCCATGGAGATAGAATGAAGCATTCTGTGGTCAAGTAAGTTTAGGGAGCTA 4135
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 4136 TTCATGTTTCACTTGCTTTGTGGAGATTCACACTATGCACTGGGAAAGTATCTGAAAAGTCTTATAATAAAGAA 4209
Query 2269 -------------------------------------------------------------------------- 2268
Sbjct 4210 ACAGGCTTAACTTTGTGTAAGAACACTGTTTATCAATGTCATTTGGCTATAGAAACATTTTCTCCTGCTGATTG 4283
Query 2269 --------------------------------------------------------------- 2268
Sbjct 4284 TGTGTGTGAAACATGTATTAACATTCCAATGAACTAGCATTTAATAAAGCACAATTTTGGAAA 4346