Nucleotide Global Alignment
Description
- Query:
- TRCN0000489480
- Subject:
- NR_131247.1
- Aligned Length:
- 3736
- Identities:
- 1636
- Gaps:
- 1856
Alignment
Query 1 ATGAGGTTGACGCTACTTTGTTGCACCTGGAGGGAAGAACGTATGGGAGAGGAAG--GAAGCGAGTTG---CCC 69
||.| |.|||| ||||| .|.||.|| | |||
Sbjct 1 -----------------------------------AGTA-GGATGG----GGAAGCTTAGGCCAG--GCCACCC 32
Query 70 GTGTG----TGCA-------AG---CTGCGGCCAGAGGATCT----ATGATG--GCCAGTACCTCCAGGCCCTG 123
.||.| |.|| || ||.|||.||||| || |.|||| ||||| ||| .|||||||
Sbjct 33 ATGGGCTCCTCCAGACCTCCAGAGTCTCCGGACAGAG---CTGCAGAGGATGCAGCCAG--CCT--TGGCCCTG 99
Query 124 AACGCGGACTGGCACGCAGACT-------------GCTTCAGGTGTTGTGACTGCAGTGCCTCCCTGTCGCACC 184
| ||..|.|.|||.|.|| ||| |.|||.||.||.||.||.|.||||||.||.||||
Sbjct 100 A-----GAAGGACCCGCTGCCTCCACCTCCGTGGGGCT--AAGTGCTGCGAGTGTAGCGTCTCCCTTTCACACC 166
Query 185 AGTACTATGAGAAGGATGGGCAGCTCTTCTGCAAGAAGGACTACTGGGCCCGCTATGGCGAGTCCTGCCATGGG 258
|||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.|||
Sbjct 167 AGTACTACGAGAAGGATGGACAGCTCTTCTGCAAGAAGGACTACTGGGCCCGCTATGGCGAGTCTTGCCACGGG 240
Query 259 TGCTCTGAGCAAATCACCAAGGGACTGGTTATGGTGGCTGGGGAGCTGAAGTACCACCCCGAGTGTTTCATCTG 332
|||||.|||||.||||||||.||.|||||.|||||||||||||||||||||||||||||.||||||||||||||
Sbjct 241 TGCTCCGAGCACATCACCAAAGGGCTGGTCATGGTGGCTGGGGAGCTGAAGTACCACCCTGAGTGTTTCATCTG 314
Query 333 CCTCACGTGTGGGACCTTTATCGGTGACGGGGACACCTACACGCTGGTGGAGCACTCCAAGCTGTACTGCGGGC 406
||||.|.|||||.|.|||.||.||.||.||||||||||||||.||||||||||||||||||||||||||.||.|
Sbjct 315 CCTCGCCTGTGGAAACTTCATTGGCGATGGGGACACCTACACACTGGTGGAGCACTCCAAGCTGTACTGTGGCC 388
Query 407 ACTGCTACTACCAGACTGTGGTGACCCCCGTCATCGAGCAGATCCTGCCTGACTCCCCTGGCTCCCACCTGCCC 480
|.||||||||||||||.|||||.||.||.||||||||.||||||||.||||||||.||.|||||||||||||||
Sbjct 389 AGTGCTACTACCAGACCGTGGTAACTCCAGTCATCGAACAGATCCTACCTGACTCACCCGGCTCCCACCTGCCC 462
Query 481 CACACCGTCACCCTGGTGTCCATCCCAGCCTCATCTCATGGCAAGCGTGGACTTTCAGTCTCCATTGACCCCCC 554
|||||.||||||||.|||||.|||||||||||..|.||||||||.||.||.||.||.||||||||.||||||||
Sbjct 463 CACACAGTCACCCTCGTGTCTATCCCAGCCTCTGCCCATGGCAAACGAGGCCTGTCTGTCTCCATCGACCCCCC 536
Query 555 GCACGGCCCACCGGGCTGTGGCACCGAGCACTCACACACCGTCCGCGTCCAGGGAGTGGATCCGGGCTGCATGA 628
.|||||||||||.||.||||||||.|||||.||.|||||.|||||.|||||.||||||||.||.||||||||||
Sbjct 537 TCACGGCCCACCAGGATGTGGCACGGAGCATTCGCACACTGTCCGAGTCCAAGGAGTGGACCCAGGCTGCATGA 610
Query 629 GCCCAGATGTGAAGAATTCCATCCACGTCGGAGACCGGATCTTGGAAATCAATGGCACGCCCATCCGAAATGTG 702
||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 611 GCCCAGATGTGAAGAATTCCATCCACGTTGGAGACCGGATCTTGGAAATCAATGGCACGCCCATCCGGAATGTG 684
Query 703 CCCCTGGACGAGATTGACCTGCTGATTCAGGAAACCAGCCGCCTGCTCCAGCTGACCCTCGAGCATGACCCTCA 776
||.|||||||||||.|||.|||||||.|||||.||||||||||||||||||||||||||||||||.|||||.||
Sbjct 685 CCGCTGGACGAGATCGACTTGCTGATCCAGGAGACCAGCCGCCTGCTCCAGCTGACCCTCGAGCACGACCCCCA 758
Query 777 CGATACACTGGGCCACGGGCTGGGGCCTGAGACCAGCCCCCTGAGCTCTCCGGCTTATACTCCCAGCGGGGAGG 850
.||..||||||||||.||||..|.|.|.||..||||||||||||||||.||||...|.|||||||||||..|||
Sbjct 759 TGACTCACTGGGCCATGGGCCCGTGTCGGATCCCAGCCCCCTGAGCTCCCCGGTGCACACTCCCAGCGGACAGG 832
Query 851 CGGGCAGCTCTGCCCGGCAGAAACCTGTCTTGAGGAGCTGCAGCATCGACAGGTCTCCGGGCGCTGGCTCACTG 924
|.|.|||||||||||||||||||||||||||||||||||||||.||.||||.|||.|||||..|..|||||||.
Sbjct 833 CAGCCAGCTCTGCCCGGCAGAAACCTGTCTTGAGGAGCTGCAGTATTGACACGTCCCCGGGTACCAGCTCACTA 906
Query 925 GGCTCCCCGGCCTCCCAGCGCAAGGACCTGGGTCGCTCTGAGTCCCTCCGCGTAGTCTGCCGGCCACACCGCAT 998
|.|||.||.|||||||||||||||||||||||||||||.||.||||||||.||.||||||||.||||||||.||
Sbjct 907 GCCTCTCCAGCCTCCCAGCGCAAGGACCTGGGTCGCTCCGAATCCCTCCGAGTGGTCTGCCGACCACACCGAAT 980
Query 999 CTTCCGGCCGTCGGACCTCATCCACGGGGAGGTGCTGGGCAAGGGCTGCTTCGGCCAGGCTATCAAGGTGACAC 1072
|||||||||.||.||.||||||||.|||||.|||||||||||||||||.||.||||||||.|||||||||||||
Sbjct 981 CTTCCGGCCATCTGATCTCATCCATGGGGAAGTGCTGGGCAAGGGCTGTTTTGGCCAGGCCATCAAGGTGACAC 1054
Query 1073 ACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCTGATCCGGTTCGACGAGGAGACCCAGAGGACGTTCCTC 1146
||||.||.|||||.||||||||||||||||||||.||.||||||||.||.|||||||||||||||||.||||||
Sbjct 1055 ACCGAGAAACAGGCGAGGTGATGGTGATGAAGGAACTTATCCGGTTTGATGAGGAGACCCAGAGGACATTCCTC 1128
Query 1147 AAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCAACGTGCTCAAGTTCATCGGGGTGCTCTACAAGGACAA 1220
||||||||.|||||||||||.||||||||.|||||.||||||||||||||||||||.|||||||||||||||||
Sbjct 1129 AAGGAGGTAAAGGTCATGCGCTGCCTGGAGCACCCTAACGTGCTCAAGTTCATCGGAGTGCTCTACAAGGACAA 1202
Query 1221 GAGGCTCAACTTCATCACTGAGTACATCAAGGGCGGCACGCTCCGGGGCATCATCAAGAGCATGGACAGCCAGT 1294
|.||||.|||||||||||.||||||||||||||||||||.||.||||||||||||||||.||| ||||||
Sbjct 1203 GCGGCTAAACTTCATCACAGAGTACATCAAGGGCGGCACCCTGCGGGGCATCATCAAGAACAT-----GCCAGT 1271
Query 1295 ACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGACATCGCATCAGGGATGGCCTACCTTCACTCCATGAACATC 1368
||||.|||||.|||||.||.|||||||||||||||||.||||||||||||||||||||.||.||.|||||||||
Sbjct 1272 ACCCGTGGAGTCAGAGGGTCAGCTTTGCCAAGGACATTGCATCAGGGATGGCCTACCTCCATTCGATGAACATC 1345
Query 1369 ATCCACCGAGACCTCAACTCCCACAACTGCCTGGTCCGCGAG-------------------------------- 1410
|||||||||||||||||||||||||||||.||||||||.|||
Sbjct 1346 ATCCACCGAGACCTCAACTCCCACAACTGTCTGGTCCGTGAGGTGAGCAGTGGGGCCCAGCAGCACTGGGCAGC 1419
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1420 CAGCTGTGCTGAAGGAAGAAGGGACCTAGGAGCTGCTCCTTTCAGGGCTTCCACTAGAGGTCAGGTGAAAAGTA 1493
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1494 CCAAGGCAGACCAGGTTAGCCCTGGCTCTGCCGTTTATACCATGGCAGCAATCCTCAGACCAGCAGTGCAAGGG 1567
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1568 TTTAACAGGTCAGAGAAGAGAAGACTGATTCAAAATGAAAAGCCCCACCTTTACTGCAGCCTTCACAGACACCA 1641
Query 1411 --------------------------------AACAA------------------------------------- 1415
|||||
Sbjct 1642 CCTGAGGTAGCCCAGGCTACCCAGGCAGCAGCAACAACTGCAACAGTGTGTGGGCAGGGGCATCTGGGCAGACT 1715
Query 1416 -------------------------------------------------------------------------- 1415
Sbjct 1716 TCTTGAATTGGAGACTTGGCAGAGGCATGTCCGTGGAGGCCAAGAGGATAAGAGGCAATCAGCCCCAAGTTTAC 1789
Query 1416 -------------------------------------------------------------------------- 1415
Sbjct 1790 AGGTCCCTAGTGTCCTCTAAGCCCTATCAGTCTGCCGAGGACACTGCACAGAAGATGGTACTATCTGCTGGGGC 1863
Query 1416 -------------------------------------------------------------------------- 1415
Sbjct 1864 TGCCCAGCAAGATAGAGAAACCAGGCTGTGGAACATCCTGAGGGTGACCCACAAAACTCGGAGCATTTGGTGGC 1937
Query 1416 -----------GAATGTGGTGGTGGCTGACTTCGGGCTGGCGCGTCTCATGGTGGACGAGAAGACTCAGCCTGA 1478
|||.|||||||||||.|||||.||||||||.||.||||||.|.||.||.||||.||||.||||
Sbjct 1938 ATGAAAAATAGGAACGTGGTGGTGGCCGACTTTGGGCTGGCTCGACTCATGATCGATGAAAAGAATCAGTCTGA 2011
Query 1479 GGGCCTGCGGAGCCTCAAGAAGCCAGACCGCAAGAAGCGCTACACCGTGGTGGGCAACCCCTACTGGATGGCAC 1552
.|.|.|.||.|||||.||||||||.||||||||||||||.|||||.||||||||||||||||||||||||||.|
Sbjct 2012 AGACTTACGCAGCCTTAAGAAGCCGGACCGCAAGAAGCGGTACACAGTGGTGGGCAACCCCTACTGGATGGCGC 2085
Query 1553 CTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTCTCCTTTGGGATCGTCCTGTGCGAGATC 1626
|.|||||||||||.||.||.||.||||||||.||||||||.|||||.||||||||.||.|||||.||.|||||.
Sbjct 2086 CAGAGATGATCAATGGTCGTAGTTATGATGAAAAGGTGGACGTGTTTTCCTTTGGAATTGTCCTCTGTGAGATT 2159
Query 1627 ATCGGGCGGGTGAACGCAGACCCTGACTACCTGCCCCGCACCATGGACTTTGGCCTCAACGTGCGAGGATTCCT 1700
||||||||.|||||.||||||||||||||.|||||||||||.|||||||||||||||||.||..|.||.|||||
Sbjct 2160 ATCGGGCGTGTGAATGCAGACCCTGACTATCTGCCCCGCACTATGGACTTTGGCCTCAATGTAAGGGGTTTCCT 2233
Query 1701 GGACCGCTACTGCCCCCCAAACTGCCCCCCGAGCTTCTTCCCCATCACCGTGCGCTGTTGCGATCTGGACCCCG 1774
||||||||||||.||.||||||||.|||||.||.||||||||||||||.||||||||.||.||.|||||.||.|
Sbjct 2234 GGACCGCTACTGTCCACCAAACTGTCCCCCAAGTTTCTTCCCCATCACTGTGCGCTGCTGTGACCTGGATCCTG 2307
Query 1775 AGAAGAGGCCATCCTTTGTGAAGCTGGAACACTGGCTGGAGACCCTCCGCATGCACCTGGCCGGCCACCTGCCA 1848
|.|||||.||.||.|||||.|||||||||||.|||||.||.||.||.|||||||||.||.|.||.|||||||||
Sbjct 2308 AAAAGAGACCCTCTTTTGTAAAGCTGGAACAATGGCTAGAAACACTTCGCATGCACTTGTCTGGTCACCTGCCA 2381
Query 1849 CTGGGCCCACAGCTGGAGCAGCTGGACAGAGGTTTCTGGGAGACCTACCGGCGCGGCGAGAGCGGACTGCCTGC 1922
|||||||||||.|||||.||.|||||..|.||.||||||||||||||||||||.|||||||||..|||||||||
Sbjct 2382 CTGGGCCCACAACTGGAACAACTGGAGCGGGGCTTCTGGGAGACCTACCGGCGGGGCGAGAGCTCACTGCCTGC 2455
Query 1923 CCACCCTGAGGTCCCCGAC------------------------------------------------------- 1941
||||||.||||||||.|||
Sbjct 2456 CCACCCCGAGGTCCCTGACTGAGCTCAGCGGGCCCCACCATCTGCATCCCTACCTTTGGAGACGATACCCTCAC 2529
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2530 CAGATTTCTCAGCAGGGGTGGCCTAGGCCTGGAGCCCTCAGCCAGGGCCGTGGTGCCCACACCCATCCCCCAGA 2603
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2604 CCCAGGCCCTGACCTGCCTTTTCCCCTCATGCAGGGTGCCCCCCAGCCTCTCTCTGCCTCTGGCCCCCAAGTCA 2677
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2678 CCAGGCTGCACACACACGTGGTCGGTCACATTGCCCTGCCTTACCTCCCAGGGGCCAACCCCTCACTGGTCTTG 2751
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2752 CATGAGCTAGAGGGTTGGGAAGCTGGGCTCATTCCACGCATTGCCTGCAGCCATCTGCACACTGCACCTGCTGG 2825
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2826 CAGCTCCTCCCCAGCAAGGCTGGGCTAGAAGGCAGCTTTAGAAGTGAGCCCCTCTAATGCCAAGGGAGCGGCTC 2899
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2900 TGTGCCCAGGAACCCAAGGGGAGGCTAGGATCCCCTTGGGGAAATCCAGGTAGCATCAGGTATTGACAGGGATC 2973
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 2974 TGAATCCCAAAGCAGAGAGAGAGGTCCAACCCCGTGTGGCCAGGCAGTGGCCCCTCACTCTTGCTTAGTGTCCA 3047
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3048 TCTCATTTCTTGATCAAAGCCACTTTAGTGAGAAATAGGTACCAGTCCTCAGGACGAGCCAGGATCCCTCAGGG 3121
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3122 GAGAGGGCAGACGATGCCTGGGATCCAGCTGACAGGAGGGTCCAGCCCGCACTACAGAGGCTGGGCAGAGGGAA 3195
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3196 GGAGGCAGCCACCCACCAGCACCCCAGCCCTCCAGGGTCATCTCAGCACCCAGGCCTCTCCCCATGGCTGGGGC 3269
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3270 AGCCCCGCCCCCTCCCTGGGTGCATCTGCCCTCTGAGTTCTTTCTGTGTGATCTATTTTTTAAGAAGAGTTTGT 3343
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3344 ATTATTTTTTCATAACGGCTGCAGCAGCAGCTGCTGGGGGTTTAGGGGGATGGTTTTGTTTTGTTGTTTTGTTT 3417
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3418 TGGTTTAGGTGGGTGGGGGTGGGAGGGCCATGTCTTCACTCCGCTTCAGTTGACCATCTAGGGCATATTAAACT 3491
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3492 GTGAAGCTTTCCCAGTGCACTTTGAATATGGAAGAGAATTTGAGCAGACCCCCGCGGGACCAAGACTGAAAGAG 3565
Query 1942 -------------------------------------------------------------------------- 1941
Sbjct 3566 GCAAGGTCTCCTTGCCTCGGCCCAGTGATCATGACAGGAATGAACCCAAACTCAGAACAATAAAATCAATTCTG 3639
Query 1942 ------------------------------------ 1941
Sbjct 3640 TGCTCCCCACGCGGGGCTTGCAAAAAAAAAAAAAAA 3675
