Nucleotide Global Alignment

Description

• Query: TRCN0000489481
• Subject: NM_178406.2
• Aligned Length: 1921
• Identities: 1557
• Gaps: 121

Alignment

Query    1  ATGAGTGATGAGCGGCGGCTGCCTGGCAGTGCAGTGGGCTGGCTGGTATGTGGGGGCCTCTCCCTGCTGGCCAA  74
            |||||||||||||||.|||||||..|||||||.||.||.|||||.|.|||.||.||.||.||.|||||.|||||
Sbjct    1  ATGAGTGATGAGCGGAGGCTGCCCAGCAGTGCGGTAGGTTGGCTAGCATGCGGAGGTCTGTCGCTGCTAGCCAA  74

Query   75  TGCCTGGGGCATCCTCAGCGTTGGCGCCAAGCAGAAGAAGTGGAAGCCCTTGGAGTTCCTGCTGTGTACACTCG  148
            .|||||||||||||||||.||.||.|||||||||||||||||||||||..||||||||.||||.||.||.||.|
Sbjct   75  CGCCTGGGGCATCCTCAGTGTGGGTGCCAAGCAGAAGAAGTGGAAGCCGCTGGAGTTCTTGCTTTGCACGCTGG  148

Query  149  CGGCCACCCACATGCTAAATGTGGCCGTGCCCATCGCCACCTACTCCGTGGTGCAGCTGCGGCGGCAGCGCCCC  222
            |.||||||||||||||.||||||||.||.|||||||||||.||..|.|||||||||||||||.||||.||.|||
Sbjct  149  CAGCCACCCACATGCTCAATGTGGCGGTACCCATCGCCACATATGCTGTGGTGCAGCTGCGGAGGCAACGTCCC  222

Query  223  GACTTCGAGTGGAATGAGGGTCTCTGCAAGGTCTTCGTGTCCACCTTCTACACCCTCACCCTGGCCACCTGTTT  296
            ||||.|||||||||.|||||.|||||.||||||||||||||.||.||||||||||||||.|||||||||||.||
Sbjct  223  GACTACGAGTGGAACGAGGGCCTCTGTAAGGTCTTCGTGTCGACATTCTACACCCTCACACTGGCCACCTGCTT  296

Query  297  CTCTGTCACCTCCCTCTCCTACCACCGCATGTGGATGGTCTGCTGGCCTGTCAACTACCGGCTGAGCAATGCCA  370
            |||||||||||||.||||||||||||||||||||||||||.|.|||||.||||||||||||||||||||.||||
Sbjct  297  CTCTGTCACCTCCATCTCCTACCACCGCATGTGGATGGTCCGATGGCCAGTCAACTACCGGCTGAGCAACGCCA  370

Query  371  AGAAGCAGGCGGTGCACACAGTCATGGGTATCTGGATGGTGTCCTTCATCCTGTCGGCCCTGCCTGCCGTTGGC  444
            ||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  371  AGAAGCAGGCGGTGCACACAGTTATGGGCATCTGGATGGTGTCCTTCATCCTGTCGGCCCTTCCTGCCGTTGGC  444

Query  445  TGGCACGACACCAGCGAGCGCTTCTACACCCATGGCTGCCGCTTCATCGTGGCTGAGATCGGCCTGGGCTTTGG  518
            |||||||||||.||||||||.|||||||||||.||||||||||||||||||||.|||||.|||||||||||.||
Sbjct  445  TGGCACGACACGAGCGAGCGTTTCTACACCCACGGCTGCCGCTTCATCGTGGCCGAGATTGGCCTGGGCTTCGG  518

Query  519  CGTCTGCTTCCTGCTGCTGGTGGGCGGCAGCGTGGCCATGGGCGTGATCTGCACAGCCATCGCCCTCTTCCAGA  592
            ||||||||||.|||||||||||||.||||||||||||||||||.||.|||||||||||||.|||||||||||||
Sbjct  519  CGTCTGCTTCTTGCTGCTGGTGGGAGGCAGCGTGGCCATGGGCATGGTCTGCACAGCCATTGCCCTCTTCCAGA  592

Query  593  CGCTGGCCGTGCAGGTGGGGCGCCAGGCCGACCGCCGCGCCTTCACCGTGCCCACCATCGTGGTGGAGGACGCG  666
            |.||||||..|||||||||||.||.|||.|||||||||.||||||||||||||||||||||||||||.|||||.
Sbjct  593  CACTGGCCACGCAGGTGGGGCACCGGGCTGACCGCCGCACCTTCACCGTGCCCACCATCGTGGTGGAAGACGCA  666

Query  667  CAGGGCAAGCGGCGCTCCTCCATCGATGGCTCGGAGCCCGCCAAAACCTCTCTGCAGACCACGGGCCTCGTGAC  740
            |||||||||||.|||||||||||.||||||||.|||||.||||.|||.||.||.||||.|||||||||.|||.|
Sbjct  667  CAGGGCAAGCGTCGCTCCTCCATTGATGGCTCAGAGCCTGCCAGAACTTCGCTACAGATCACGGGCCTTGTGGC  740

Query  741  CACCATAGTCTTCATCTACGACTGCCTCATGGGCTTCCCTGTGCTGGTGGTGAGCTTCAGCAGCCTGCGGGCCG  814
            ||||||.||..|||||||.||||||||||||||.||||||||||||||||||||||||||.||.||||||||.|
Sbjct  741  CACCATTGTGGTCATCTATGACTGCCTCATGGGTTTCCCTGTGCTGGTGGTGAGCTTCAGTAGTCTGCGGGCAG  814

Query  815  ACGCCTCAGCGCCCTGGATGGCACTCTGCGTGCTGTGGTGCTCCGTGGCCCAGGCCCTGCTGCTGCCTGTGTTC  888
            |.||.|||||.|||||||||||.|||||.||.|||||||||||||||.||||||||||||||||||||.|||||
Sbjct  815  ATGCTTCAGCACCCTGGATGGCGCTCTGTGTCCTGTGGTGCTCCGTGACCCAGGCCCTGCTGCTGCCTCTGTTC  888

Query  889  CTCTGGGCCTGCGACCGCTACCGGGCTGACCTCAAAGCTGTCCGGGAGAAGTGCATGGCCCTCATGGCCAACGA  962
            ||||||.|.||.||.||.||||||||.||.|||||.||.|||.||||||||||..|||||||.|||||||||||
Sbjct  889  CTCTGGACTTGTGATCGTTACCGGGCGGATCTCAAGGCAGTCTGGGAGAAGTGTGTGGCCCTTATGGCCAACGA  962

Query  963  CGAGGAGTCAGACGATGAGACCAGCCTGGAAGGTGGCATCTCCCCGGACCTGGTGTTGGAGCGCTCCCTGGACT  1036
            |||.||.||.|||.||||||||||.||.||.||..||||||||||.|||.||||.|||||||||||.||.||||
Sbjct  963  CGAAGATTCTGACAATGAGACCAGTCTAGAGGGCAGCATCTCCCCCGACATGGTATTGGAGCGCTCTCTTGACT  1036

Query 1037  ATGGCTATGGAGGTGATTTTGTGGCCCTAGATAGGATGGCCAAGTATGAGATCTCCGCCCTGGAGGGGGGCCTG  1110
            ||.|||||||||||||.||.|||||.||.||.|||||||||||||||||..||||.||||||||.||.|||.|.
Sbjct 1037  ATAGCTATGGAGGTGACTTCGTGGCTCTGGACAGGATGGCCAAGTATGAACTCTCTGCCCTGGAAGGAGGCTTA  1110

Query 1111  CCCCAGCTCTACCCACTGCGGCCCTTGCAGGAGGACAAGATGCAATACCT------------------------  1160
            ||.|||||||||||.||||||||..||||||||||...||||||.||.||                        
Sbjct 1111  CCACAGCTCTACCCTCTGCGGCCACTGCAGGAGGATCGGATGCAGTATCTGCAGGGCGCGGGGAGGCATCGGTG  1184

Query 1161  ---------------------------------------------GCAGGTCCCGCCCACGCGGCGCTTCTCCC  1189
                                                         |||||||||||||||.|||||.|||||||
Sbjct 1185  CGGGTTTCCAGGAGGGCAGCCCTGTTTCAGCCCGGCCGGGTGCTCGCAGGTCCCGCCCACCCGGCGGTTCTCCC  1258

Query 1190  ACGACGATGCGGACGTGTGGGCCGCCGTCCCGCTGCCCGCCTTCCTGCCGCGCTGGGGCTCCGGCGAGGACCTG  1263
            ||||.|||||.|||||||||||.|||||||||||||||.||||||||||.||||||.||||.|||||||||.||
Sbjct 1259  ACGATGATGCCGACGTGTGGGCAGCCGTCCCGCTGCCCACCTTCCTGCCACGCTGGAGCTCGGGCGAGGACTTG  1332

Query 1264  GCCGCCCTGGCGCACCTGGTGCTGCCTGCCGGGC-CCGAGCGGCGCCGCGCCAGCCTCCTGGCCTTCGCGGAGG  1336
            ||.||.|||||.|||.|..|||||||.| ||||| ||||.|||||.||||..|||||.|||||||||||.||||
Sbjct 1333  GCAGCTCTGGCACACTTAATGCTGCCCG-CGGGCTCCGACCGGCGGCGCGGGAGCCTGCTGGCCTTCGCCGAGG  1405

Query 1337  ACGCACCACCGTCCCGCGCGCGCCGCCGCTCGGCCGAGAGCCTGCTGTCGCTGCGGCCCTCGGCCCTGGATAGC  1410
            |.||.||.||||.||||.|||||||.|||||.||||||||||||.||||.||||.|||||||.||||.||..||
Sbjct 1406  ATGCGCCCCCGTTCCGCCCGCGCCGTCGCTCTGCCGAGAGCCTGTTGTCCCTGCAGCCCTCGTCCCTAGACGGC  1479

Query 1411  GGCCCGCGGGGAGCCCGC----GACTCGCCCCCCGGCAGCCCGCGCCGCCGCCCCGGGCCCGGCCCCCGCTCCG  1480
            ||||||||    .|.|||    ||||||||.||||||||||||||.||||||||||||||.|||.|||||||||
Sbjct 1480  GGCCCGCG----TCACGCGCAGGACTCGCCTCCCGGCAGCCCGCGTCGCCGCCCCGGGCCTGGCGCCCGCTCCG  1549

Query 1481  CCTCGGCCTCGCTGCTGCCCGACGCCTTCGCCCTGACCGCCTTCGAGTGCGAGCCACAGGCCCTGCGCC----G  1550
            ||||||.||||||.|||||||||||||||||.|||||||||||||||.|||||||.|||||.|||||.|    |
Sbjct 1550  CCTCGGTCTCGCTACTGCCCGACGCCTTCGCGCTGACCGCCTTCGAGCGCGAGCCGCAGGCTCTGCGTCGCGTG  1623

Query 1551  CCCGCCCGGG-----CCCTTCCCCGCTGCGCCCGCCGCCCCCGACGGCGCAGATCCCGGAGAGGCCCCGACGCC  1619
            |||||||..|     ||||||||||||         ||||..|||.||||.||.||.|..||||.|||.|||||
Sbjct 1624  CCCGCCCCAGCACAACCCTTCCCCGCT---------GCCCGGGACAGCGCGGAGCCTGCTGAGGTCCCAACGCC  1688

Query 1620  CCC----------AAGCAGCGCCCAGCGGAGCCCAGGGCCACGCCCCTCTGCGCACTCGCACGCCGGCTCTCTG  1683
            |||          |.|||.||  |||      ||||||  |||||...|.||||.|.||||||..||..|.|||
Sbjct 1689  CCCTGGTGGCCGTACGCAACG--CAG------CCAGGG--ACGCCGGGCCGCGCGCACGCACGTGGGGCCCCTG  1752

Query 1684  CGCCCCGGCCTGAGCGCGTCGTGGGGCGAGCCCGGGGGGCTGCGCGCGGCGGGCGGCGGCGGCAGCACCAGCAG  1757
            |....|.||||||||||.||.|||||||||||.||.||..|||.|||||||   |||.|||||||||..|||||
Sbjct 1753  CAGAGCAGCCTGAGCGCATCTTGGGGCGAGCCAGGCGGCTTGCACGCGGCG---GGCTGCGGCAGCATTAGCAG  1823

Query 1758  CTTCCTGAGTTCCCCCTCCGAGTCCTCGGGCTACGCCACGCTGCACTCGGACTCGCTGGGCTCCGCGTCCG  1828
            |||.|||||.||.||||||||||||||||||||||.|||||||||||||||||||||||||||.|||||| 
Sbjct 1824  CTTTCTGAGCTCGCCCTCCGAGTCCTCGGGCTACGTCACGCTGCACTCGGACTCGCTGGGCTCTGCGTCC-  1893