Nucleotide Global Alignment
Description
- Query:
- TRCN0000489498
- Subject:
- NR_045693.1
- Aligned Length:
- 4776
- Identities:
- 1431
- Gaps:
- 3195
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGTCGGCAGGTGGAGGGAGAAGGGAAAGTTTGGCCCGTGCTTGGGGTTCGGGTGGAGGGCGGGACGGAGGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGGCTGGGTAGAAGCTTGTTTCGCGGTGCCGCGGAGGTTAAGGCCGGCTCGTGGGCTGGGCCGGGGACTGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACGCGGAGCCGCGGGAGGCGAGGTCGGTCGCAGCCGCGCGTCTCCGCCTCGGGGCCGCGCTTGACCCGCGCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCGGCGTTGTGCGCCCCAAGGCTGGGCCAAGCGGCGGGTTGGGGGCGGCGGCTGGGCGTGGGGAGGCGCGCGG 296
Query 1 ---------------------------------------------------------ATGTCCGAGGACTCGAG 17
|||||||||||||||||
Sbjct 297 CGAGGTGACCTGAGAGCCCGGAGCGTGAGGAGCACGGAGCCAGGCGCTGCAGCCGTCATGTCCGAGGACTCGAG 370
Query 18 CGCCCTGCCCTGGTCCATCAACAGGGACGATTACGAGCTGCAGGAGGTGATCGGGAGTGGAGCAACTGCTGTAG 91
||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||.||.|
Sbjct 371 CGCCCTGCCCTGGTCCATCAACAGGGACGACTACGAGCTGCAGGAGGTGATAGGGAGTGGAGCAACTGCCGTGG 444
Query 92 TCCAAGCAGCTTATTGTGCCCCTAAAAAGGAGAAAGTGGCAATCAAACGGATAAACCTTGAGAAATGTCAAACT 165
|||||||||||||.||||||||.||||||||||.||||||.|||||.|||||||||||.|||||.|||||.||.
Sbjct 445 TCCAAGCAGCTTACTGTGCCCCCAAAAAGGAGAGAGTGGCGATCAAGCGGATAAACCTGGAGAAGTGTCAGACC 518
Query 166 AGCATGGATGAACTCCTGAAAGAAATTCAAGCCATGAGTCAATGCCATCATCCTAATATTGTATCTTACTACAC 239
|||||||||||.||||||||||||||.||.||||||||.|||||||||||||||||.|||||.|||||||||||
Sbjct 519 AGCATGGATGAGCTCCTGAAAGAAATCCAGGCCATGAGCCAATGCCATCATCCTAACATTGTGTCTTACTACAC 592
Query 240 ATCTTTTGTGGTAAAAGATGAGCTGTGGCTTGTCATGAAGCTGCTAAGTGG----------------------- 290
|||||||||||||||.||||||||||||||.||||||||||||||||||||
Sbjct 593 ATCTTTTGTGGTAAAGGATGAGCTGTGGCTCGTCATGAAGCTGCTAAGTGGAGTGACACACTGGAGAAACTGGA 666
Query 291 -------------------------------------------------------------------------- 290
Sbjct 667 TTGCTTTGTTAAAGGCCCGTTTCATATGATGGTTGCTAACACCAACCACCTTTCAAGATGGTGGTCAAGCATGG 740
Query 291 --------------------------------AGGTTCTGTTCTGGATATTATTAAGCACATTGTGGCAAAAGG 332
||||||||||||||||||||||||.||||||||||||||.||
Sbjct 741 TTCTTTTCAGTATGGACAGATATGGGATCATTAGGTTCTGTTCTGGATATTATTAAACACATTGTGGCAAAGGG 814
Query 333 GGAACACAAAAGTGGAGTCCTAGATGAATCTACCATTGCTACGATACTCCGAGAAGTACTGGAAGGGCTGGAAT 406
||||||.||.||||||||.||.||.||..|.|||||||||||.||.|||||||||||..|.|||||.|||||.|
Sbjct 815 GGAACATAAGAGTGGAGTTCTGGACGAGCCAACCATTGCTACAATCCTCCGAGAAGTCTTAGAAGGACTGGAGT 888
Query 407 ATCTGCATAAAAATGGACAGATCCACAGAGATGTGAAAGCTGGAAACATTCTTCTTGGAGAAGATGGCTCAGTA 480
|.||||||||.|||||.|||||.||||||||||||||||||||||||||||||||.||||||||.|||||.||.
Sbjct 889 ACCTGCATAAGAATGGGCAGATTCACAGAGATGTGAAAGCTGGAAACATTCTTCTAGGAGAAGACGGCTCTGTG 962
Query 481 CAGATTGCAGACTTTGGGGTTAGTGCTTTTTTAGCAACTGGTGGTGATATTACCCGAAATAAAGTGAGAAAGAC 554
|||||||||||.||.||.||.||||||||||||||.|||||||||||.||||||.||||||||||||||||.||
Sbjct 963 CAGATTGCAGATTTCGGCGTCAGTGCTTTTTTAGCCACTGGTGGTGACATTACCAGAAATAAAGTGAGAAAAAC 1036
Query 555 CTTTGTTGGCACCCCTTGTTGGATGGCACCTGAAGTTATGGAACAGGTCCGTGGTTATGATTTCAAAGCTGATA 628
.||||||||||||||.||.|||||||||||.|||||||||||.|||||.||.|||||||||||.||||||||||
Sbjct 1037 GTTTGTTGGCACCCCGTGCTGGATGGCACCCGAAGTTATGGAGCAGGTTCGAGGTTATGATTTTAAAGCTGATA 1110
Query 629 TTTGGAGTTTTGGAATTACAGCAATTGAATTGGCTACAGGGGCGGCTCCTTATCATAAATATCCACCAATGAAG 702
||||||||||||||||.||.||.||||||.||||.||||||||.||||||||||||||||||||||||||||||
Sbjct 1111 TTTGGAGTTTTGGAATCACTGCGATTGAACTGGCCACAGGGGCAGCTCCTTATCATAAATATCCACCAATGAAG 1184
Query 703 GTTTTAATGCTGACACTGCAGAACGATCCTCCTTCTTTGGAAACTGGTGTTCAAGATAAAGAAATGCTGAAAAA 776
||||||||||||||.||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1185 GTTTTAATGCTGACGCTCCAGAATGATCCTCCTTCTTTGGAAACTGGTGTTCAAGATAAAGAAATGCTGAAGAA 1258
Query 777 ATATGGAAAATCATTTAGAAAAATGATTTCATTGTGCCTTCAAAAAGATCCAGAAAAAAGACCAACAGCAGCAG 850
|||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||
Sbjct 1259 ATATGGAAAATCATTTAGAAAAATGATTTCATTGTGCCTTCAAAAGGATCCAGAAAAAAGGCCAACAGCAGCAG 1332
Query 851 AACTATTAAGGCACAAATTTTTCCAGAAAGCAAAGAATAAAGAATTTCTTCAAGAAAAAACATTGCAGAGAGCA 924
||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||.|.|.|||||||||
Sbjct 1333 AACTGTTGAGGCACAAATTTTTCCAGAAAGCAAAGAATAAAGAATTTCTTCAAGAAAAAATACTCCAGAGAGCA 1406
Query 925 CCAACCATTTCTGAAAGAGCAAAAAAGGTTCGGAGAGTACCAGGTTCCAGTGGGCGTCTTCATAAGACAGAGGA 998
||.|||||||||||||||.|.||||||||.||.|||||.||.||.||||||||.|||||.||||||||||||||
Sbjct 1407 CCTACCATTTCTGAAAGATCTAAAAAGGTCCGCAGAGTCCCCGGCTCCAGTGGCCGTCTCCATAAGACAGAGGA 1480
Query 999 TGGAGGCTGGGAGTGGAGTGATGATGAATTTGATGAAGAAAGTGAGGAAGGGAAAGCAGCAATTTCACAACTCA 1072
.||||||||||||||||||||.|||||.||||||||.||.||.||||||||||.|||.||.|||||.||.||.|
Sbjct 1481 CGGAGGCTGGGAGTGGAGTGACGATGAGTTTGATGAGGAGAGCGAGGAAGGGAGAGCTGCCATTTCTCAGCTGA 1554
Query 1073 GGTCTCCCCGAGTGAAAGAATCAATATCAAATTCTGAGCTCTTTCCAACAACTGATCCTGTGGGTACTTTGCTC 1146
|||||||||||||.|||||.|||.||||.|.||||||||||||..|..||.||||.||..||||.||||||||.
Sbjct 1555 GGTCTCCCCGAGTAAAAGACTCATTATCCAGTTCTGAGCTCTTCGCGGCAGCTGAGCCCATGGGGACTTTGCTT 1628
Query 1147 CAAGTTCCAGAACAGATCTCTGCTCATCTACCTCAGCCAGCTGGGCAGATTGCTACACAGCCAACTCAAGTCTC 1220
|||||||||||||||||.||||||||||||||||||||||||||.|||||..|.|||||||||.||||||||||
Sbjct 1629 CAAGTTCCAGAACAGATTTCTGCTCATCTACCTCAGCCAGCTGGCCAGATGCCCACACAGCCAGCTCAAGTCTC 1702
Query 1221 TCTCCCACCCACCGCAGAGCCAGCAAAAACAGCTCAGGCTTTGTCTTCAGGATCAGGTTCACAAGAAACCAAGA 1294
|||||..|||.|.|||||||||||||||.||||.||||||..||||||||||..|.|.||.||.||.|||||||
Sbjct 1703 TCTCCTGCCCCCTGCAGAGCCAGCAAAACCAGCACAGGCTCAGTCTTCAGGAGAACGGTCCCAGGAGACCAAGA 1776
Query 1295 TCCCAATCAGTCTAGTACTAAGATTAAGGAATTCCAAAAAAGAACTAAATGATATTCGATTTGAATTTACTCCT 1368
||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCCCTATCAGTCTAGTGCTAAGATTAAGGAATTCCAAAAAAGAACTAAATGATATTCGATTTGAATTTACTCCT 1850
Query 1369 GGGAGAGATACAGCAGAGGGTGTCTCTCAGGAACTCATTTCTGCTGGCCTGGTCGACGGAAGGGATTTAGTAAT 1442
|||||||||||||||||||||||.||||||||.||||||||||||||||||||.||.|||||||||||||||||
Sbjct 1851 GGGAGAGATACAGCAGAGGGTGTTTCTCAGGAGCTCATTTCTGCTGGCCTGGTTGATGGAAGGGATTTAGTAAT 1924
Query 1443 AGTGGCAGCTAATTTGCAGAAAATTGTGGAAGAACCTCAGTCAAATCGATCTGTCACTTTCAAACTGGCATCTG 1516
|||||||||.|||.|||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 1925 AGTGGCAGCCAATCTGCAGAAGATTGTGGAAGAACCTCAGTCAAACCGATCTGTCACTTTCAAACTGGCATCTG 1998
Query 1517 GTGTCGAAGGCTCAGATATTCCTGATGATGGTAAACTGATAGGATTTGCCCAGCTCAGCATCAGC--------- 1581
||||.||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1999 GTGTTGAAGGCTCGGATATTCCTGATGATGGCAAACTGATAGGATTTGCCCAGCTCAGCATCAGCTAAACCACA 2072
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2073 GACCTGGAAGAGTCAGCCTAGGAGATGCCACACATGCACATGTCTGTTGCTTCTGTTGGCCTGAACCTACAACT 2146
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2147 GCCAAAGAACCCAGCAACAAACCTCCCAGCTTGGAGCTTTAGTTTTTTTCTTTGTTTTTCTTGCTGCCCTCCTC 2220
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2221 CCTGCCCCCCTTTTCTTACAAGGAAAGAAAAGTTGGATCGTCAGTGGCCAGCCTCCCCTCAGAGAGTTCCGTTG 2294
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2295 GTAGATACGCTGCTCATGTCCCCTCTCCCTCCATCTGAGAAGCAGAAGCGGCCAGTGTGCCTCAAGGCCCAGGA 2368
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2369 TGGAAGACTCTCAACTCATTCTTGCCTTACTACAGTGATGGTCCCAGTGGATAGAGCAGCTGCACTGGGCAACC 2442
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2443 TCATCTTGCCTGCTCTCCCGCACCTGCTGGGACATGAGCATCTTGGGATATCTCTTTAACACTCAAGTAGCAAT 2516
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2517 TAAAGTTGATTGTTCAGCTGGAGCCCAGAGAATTTAATTACTGTTTTTTTCTTTGTACCTGATGTGAATTCTAG 2590
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2591 CAACCTTTGTTAGGAAAAAGCACAGCCTCGAATGGAGGCAGCCTAAACTCTTGTCTGTCCTCTTCATGGTGTCT 2664
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2665 CTTCCGTGTTTTGCTGAGCTGTTCTCAGGCACCCCCTCACTGCTCCCTCTTGAAAGGGTTGCTAGCCTTAACTT 2738
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2739 CAGCTGGTGCGAAACATCTGACTGTTGTCAGACTCCAGCCATCTGCTCCTGCAGCGTGCAGCTTTGGATTGTTT 2812
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2813 GTGCAGAAAACAGCAAGCGATGGCTGATAAATCTTATCTTGCCAGAGGTAGTTTTTGAACAAGAAAAAGAACTT 2886
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2887 TGTAAATCATATCATTGGGAAAGTATTTTCAATATTTAAAAAAATTAAGCTGAAGAAAAACTGATCTTTGATCC 2960
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 2961 TCCTGTGAAGATGGACTTGCCTGGCCTTAGTCATGTGGAAATGGTGTACCCGGCTGAGATTTTTACAGCAATAA 3034
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3035 AGGGGACTCTCACTAGGCTAGAGGCCGCCTTCTGCTCCTCTCTTGCACTGACTCTGTGGAGGGGGTCTTCATTC 3108
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3109 ACTAAACTGACCCAGGATGGAACACGAAACCACACGTGCCGTGACCTTTAGGTTTATGAGTAGACAGTGTTAAT 3182
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3183 TTGATTTTCTACAGGAATTATGTAACTTATTCTTTAGGTTTAAAAAGAATGCTCAAAGGCTATACAGAGAAGCC 3256
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3257 CTGTATCAAAAACCAAACCAAACAAACGAACAAGATCAATGCAATATGGGAATAATCAGTGAGGTTGGCTTTTT 3330
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3331 TCCCTACTGTTAAATAGCATTTGTCTAATTGCTAATAAGCCTGTCGTTACCAAATTTTATATAAGAATGGAATA 3404
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3405 GTCAGTCTGGCCTTAAAGAGACACACAAAGATGGGCTGTGAGCCCCTAGAAAGGGACTAGTTAGTTGCCTTTGA 3478
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3479 TAGAATTCCTTGCACCTGCCATTGTTGGTTTGATGAACACGATTAGGTACCCAGTGTGATCCCACCCTCACCCC 3552
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3553 ACCTCACCCAGAGCAAACCGTAGGACTGCTCCTAGAAGCAGCTCTGTTGACTTCTCTTGGAACACACCTGAACG 3626
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3627 CTTTCCTCATTTCTAACCTGTGCCACCTCTTGTTTCGTTCATGCTGAGCCTGTAGTTTCAGTCATGGACTTTTG 3700
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3701 TACTGTTGAGTGCAAAGGCATGTTGGGAAAGGTGTTGGGGAGGAAGAGAAGATGGATTTGAGAGGGGAGTTGGG 3774
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3775 AGACTAGAGAGTTCAAGGTCCCAGCAGGTTGGTAAAAGGAGGAGCCTACCAAGTTAGGAGGGAGAAAAAAGATT 3848
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3849 AACCAGCTAGTTAGAAAACCATTTATTTTTCTTTCTTCTTTCCCCACTTGTTAGAGGTAGGGCTATGAGGAAGC 3922
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3923 AAGGATGGGAGGTGGGGTTGAGGTTTGGGAAGCAGGCAGCAAGCGTTACCTTTGCAGAAGACTCGTGTCTTGCT 3996
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 3997 GTAGAATCCAGTTTGGTTTCAGCAGCTTGACTTAATGCACTTACAGGCTCAGGAAGGAATTTGCTATCACTGTT 4070
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 4071 GTGGCTTTTGACTTGGGGTGGTCCAGTGCCAGGCTGGAAGTAAGCACAGCCCATCTCCTGTTCACATTCTCTAG 4144
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 4145 ACCGTCATCACCTTTGCCCTGCTCTGGGGGACAGACATGACAGTAAAAGTGTCCCGGGACTCTTTCCGTTCATT 4218
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 4219 GTTTGCTTTTTTGGCAACTAGGAGGTTGGCACTAAGACCCAGGACAATGTTACTTCTCTGTGATGTGTGGTGAC 4292
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 4293 TTCCCTCTGCTGGCTTATGCAGTGATGGTGAATGAACCAGTCAGTGGAAAACTGCTGAGGTGGGACAGCTGGGA 4366
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 4367 GCCAGGGAGCCGAAGCAGTGCTTCAGGGGGTACTGTCACTAAGCCCTCAAGATACCCTTGTCCCTGAAGTAGGG 4440
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 4441 ACTAACTATAGCACAAGATAGTATGTGCCAATATAGCCAAGATAATATGTGAAATGGTCTTTCTAAATGATTAA 4514
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 4515 AGAAATCATTTGCGTTGGTTCTTGTTTTTTGTGTTTTCCCTCTATTTTCAACCAAATCCTAGAGCCAGCTGAGA 4588
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 4589 CTGCTGAGTAATCTGAAGGCGAGAGCAAGGATATACCAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGGATGGT 4662
Query 1582 -------------------------------------------------------------------------- 1581
Sbjct 4663 GGAAGATGTAAAATATTACCTTCTCCCTCTCCTCTTGACTTGTATTTTACTGCATGGTTTTTTTTTTTTCATTT 4736
Query 1582 ---------------------------------------- 1581
Sbjct 4737 TTAATCAATAAAGAGTAAATTGTCCTTAATGATATATAAA 4776
