Nucleotide Global Alignment

Description

Query:
TRCN0000489498
Subject:
XM_006511920.2
Aligned Length:
1581
Identities:
912
Gaps:
576

Alignment

Query    1  ATGTCCGAGGACTCGAGCGCCCTGCCCTGGTCCATCAACAGGGACGATTACGAGCTGCAGGAGGTGATCGGGAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGGAGCAACTGCTGTAGTCCAAGCAGCTTATTGTGCCCCTAAAAAGGAGAAAGTGGCAATCAAACGGATAAACC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTGAGAAATGTCAAACTAGCATGGATGAACTCCTGAAAGAAATTCAAGCCATGAGTCAATGCCATCATCCTAAT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  ATTGTATCTTACTACACATCTTTTGTGGTAAAAGATGAGCTGTGGCTTGTCATGAAGCTGCTAAGTGGAGGTTC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TGTTCTGGATATTATTAAGCACATTGTGGCAAAAGGGGAACACAAAAGTGGAGTCCTAGATGAATCTACCATTG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CTACGATACTCCGAGAAGTACTGGAAGGGCTGGAATATCTGCATAAAAATGGACAGATCCACAGAGATGTGAAA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GCTGGAAACATTCTTCTTGGAGAAGATGGCTCAGTACAGATTGCAGACTTTGGGGTTAGTGCTTTTTTAGCAAC  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  TGGTGGTGATATTACCCGAAATAAAGTGAGAAAGACCTTTGTTGGCACCCCTTGTTGGATGGCACCTGAAGTTA  592
                                                                      ||||||||.|||||||
Sbjct    1  ----------------------------------------------------------ATGGCACCCGAAGTTA  16

Query  593  TGGAACAGGTCCGTGGTTATGATTTCAAAGCTGATATTTGGAGTTTTGGAATTACAGCAATTGAATTGGCTACA  666
            ||||.|||||.||.|||||||||||.||||||||||||||||||||||||||.||.||.||||||.||||.|||
Sbjct   17  TGGAGCAGGTTCGAGGTTATGATTTTAAAGCTGATATTTGGAGTTTTGGAATCACTGCGATTGAACTGGCCACA  90

Query  667  GGGGCGGCTCCTTATCATAAATATCCACCAATGAAGGTTTTAATGCTGACACTGCAGAACGATCCTCCTTCTTT  740
            |||||.||||||||||||||||||||||||||||||||||||||||||||.||.|||||.||||||||||||||
Sbjct   91  GGGGCAGCTCCTTATCATAAATATCCACCAATGAAGGTTTTAATGCTGACGCTCCAGAATGATCCTCCTTCTTT  164

Query  741  GGAAACTGGTGTTCAAGATAAAGAAATGCTGAAAAAATATGGAAAATCATTTAGAAAAATGATTTCATTGTGCC  814
            |||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  165  GGAAACTGGTGTTCAAGATAAAGAAATGCTGAAGAAATATGGAAAATCATTTAGAAAAATGATTTCATTGTGCC  238

Query  815  TTCAAAAAGATCCAGAAAAAAGACCAACAGCAGCAGAACTATTAAGGCACAAATTTTTCCAGAAAGCAAAGAAT  888
            |||||||.||||||||||||||.|||||||||||||||||.||.||||||||||||||||||||||||||||||
Sbjct  239  TTCAAAAGGATCCAGAAAAAAGGCCAACAGCAGCAGAACTGTTGAGGCACAAATTTTTCCAGAAAGCAAAGAAT  312

Query  889  AAAGAATTTCTTCAAGAAAAAACATTGCAGAGAGCACCAACCATTTCTGAAAGAGCAAAAAAGGTTCGGAGAGT  962
            ||||||||||||||||||||||.|.|.|||||||||||.|||||||||||||||.|.||||||||.||.|||||
Sbjct  313  AAAGAATTTCTTCAAGAAAAAATACTCCAGAGAGCACCTACCATTTCTGAAAGATCTAAAAAGGTCCGCAGAGT  386

Query  963  ACCAGGTTCCAGTGGGCGTCTTCATAAGACAGAGGATGGAGGCTGGGAGTGGAGTGATGATGAATTTGATGAAG  1036
            .||.||.||||||||.|||||.||||||||||||||.||||||||||||||||||||.|||||.||||||||.|
Sbjct  387  CCCCGGCTCCAGTGGCCGTCTCCATAAGACAGAGGACGGAGGCTGGGAGTGGAGTGACGATGAGTTTGATGAGG  460

Query 1037  AAAGTGAGGAAGGGAAAGCAGCAATTTCACAACTCAGGTCTCCCCGAGTGAAAGAATCAATATCAAATTCTGAG  1110
            |.||.||||||||||.|||.||.|||||.||.||.||||||||||||||.|||||.|||.||||.|.|||||||
Sbjct  461  AGAGCGAGGAAGGGAGAGCTGCCATTTCTCAGCTGAGGTCTCCCCGAGTAAAAGACTCATTATCCAGTTCTGAG  534

Query 1111  CTCTTTCCAACAACTGATCCTGTGGGTACTTTGCTCCAAGTTCCAGAACAGATCTCTGCTCATCTACCTCAGCC  1184
            |||||..|..||.||||.||..||||.||||||||.|||||||||||||||||.||||||||||||||||||||
Sbjct  535  CTCTTCGCGGCAGCTGAGCCCATGGGGACTTTGCTTCAAGTTCCAGAACAGATTTCTGCTCATCTACCTCAGCC  608

Query 1185  AGCTGGGCAGATTGCTACACAGCCAACTCAAGTCTCTCTCCCACCCACCGCAGAGCCAGCAAAAACAGCTCAGG  1258
            ||||||.|||||..|.|||||||||.|||||||||||||||..|||.|.|||||||||||||||.||||.||||
Sbjct  609  AGCTGGCCAGATGCCCACACAGCCAGCTCAAGTCTCTCTCCTGCCCCCTGCAGAGCCAGCAAAACCAGCACAGG  682

Query 1259  CTTTGTCTTCAGGATCAGGTTCACAAGAAACCAAGATCCCAATCAGTCTAGTACTAAGATTAAGGAATTCCAAA  1332
            ||..||||||||||..|.|.||.||.||.|||||||||||.|||||||||||.|||||||||||||||||||||
Sbjct  683  CTCAGTCTTCAGGAGAACGGTCCCAGGAGACCAAGATCCCTATCAGTCTAGTGCTAAGATTAAGGAATTCCAAA  756

Query 1333  AAAGAACTAAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGGTGTCTCTCAGGAACTCAT  1406
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||
Sbjct  757  AAAGAACTAAATGATATTCGATTTGAATTTACTCCTGGGAGAGATACAGCAGAGGGTGTTTCTCAGGAGCTCAT  830

Query 1407  TTCTGCTGGCCTGGTCGACGGAAGGGATTTAGTAATAGTGGCAGCTAATTTGCAGAAAATTGTGGAAGAACCTC  1480
            |||||||||||||||.||.||||||||||||||||||||||||||.|||.|||||||.||||||||||||||||
Sbjct  831  TTCTGCTGGCCTGGTTGATGGAAGGGATTTAGTAATAGTGGCAGCCAATCTGCAGAAGATTGTGGAAGAACCTC  904

Query 1481  AGTCAAATCGATCTGTCACTTTCAAACTGGCATCTGGTGTCGAAGGCTCAGATATTCCTGATGATGGTAAACTG  1554
            |||||||.||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||.||||||
Sbjct  905  AGTCAAACCGATCTGTCACTTTCAAACTGGCATCTGGTGTTGAAGGCTCGGATATTCCTGATGATGGCAAACTG  978

Query 1555  ATAGGATTTGCCCAGCTCAGCATCAGC  1581
            |||||||||||||||||||||||||||
Sbjct  979  ATAGGATTTGCCCAGCTCAGCATCAGC  1005