Nucleotide Global Alignment

Description

• Query: TRCN0000489514
• Subject: NM_001285456.1
• Aligned Length: 1243
• Identities: 875
• Gaps: 227

Alignment

Query    1  ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA  74
            ||||||||.||.|||||||||||.||....||||||||.||.|||||                        |||
Sbjct    1  ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA  50

Query   75  TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAGA  148
            |         |||||..|||.||||||||||||.||.||||.||||..||||.|.|                  
Sbjct   51  T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAA------------------  97

Query  149  CCCCCACTGAGGACGGATCTGAGGAACCGGGCTCTGAAACCTCTGATGCTAAGAGCACTCCAACAGCGGAAGCT  222
                                                                                 ||||.
Sbjct   98  ---------------------------------------------------------------------AAGCC  102

Query  223  GAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCCAAGCTCGCATGGT  296
            ||||||||||||||.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.||||||||..|||.
Sbjct  103  GAAGAAGCAGGCATCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTCAAGCTCGTGTGGC  176

Query  297  CAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGGGGGCTGATGGTAAAA------CGAAGA  364
            |      |||||||||.||||.||||..||.||.||.|||||||||||.||||||||.||||      ||||||
Sbjct  177  C------AGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGGGCGCTGATGGCAAAACCGGGGCGAAGA  244

Query  365  TCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGATTCCAGCAAAAACC  438
            ||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||.||.||.||.|||
Sbjct  245  TCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGATCCCGGCCAAGACC  318

Query  439  CCGCCC-GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGCGGCTACAGCAGCC  511
            .||||| || ||.|||||.||.||..|.||.||||||||.||||||||.||.||.||.||||||||||||||||
Sbjct  319  ACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGGTGAACCACCAAAATCCGGAGAACGAAGCGGCTACAGCAGCC  391

Query  512  CCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCACCCGGGAGCCCAAG  585
            |||||||.||.||.||.||.|||||.|||||.||||||||.|||||.|||||.||.||||||||||||||||||
Sbjct  392  CCGGCTCTCCCGGAACGCCTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCACCCGGGAGCCCAAG  465

Query  586  AAGGTGGCAGTGGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGACAGCCCCCGTGCC  659
            |||||||||||||||||.|||||.||.|||||.||.||..|....|||||||||||||||||.|||||.|||||
Sbjct  466  AAGGTGGCAGTGGTCCGCACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGACTGCCCCTGTGCC  539

Query  660  CATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAGCCGGGAGGCGGGA  733
            ||||||||||||.||||||||||.|||.|||||.|||||.|||||||||||||||||||||||.|||||.||.|
Sbjct  540  CATGCCAGACCTAAAGAATGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAGCCAGGAGGTGGCA  613

Query  734  AGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAA  807
            ||                                                                        
Sbjct  614  AG------------------------------------------------------------------------  615

Query  808  CACGTCCCGGGAGGCGGCAGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGG  881
                                 |||||||||||||||||.||.||.|||||||||||.|||||||||||||||||
Sbjct  616  ---------------------GTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGACCTCCAAGTGTGG  668

Query  882  CTCATTAGGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCAAGG  955
            |||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||||.||||||||||
Sbjct  669  CTCGTTAGGGAACATCCATCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAGCTGGACTTCAAGG  742

Query  956  ACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAATAAAAAGATTGAA  1029
            ||||||||||||||||||||||.|||.||||.||||||||||||||||||||.|||||.|||||.|||||||||
Sbjct  743  ACAGAGTCCAGTCGAAGATTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAATAAGAAGATTGAA  816

Query 1030  ACCCACAAGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCC  1103
            ||||||||||||||||||.|.|||||.||||||||||||||||||||.||.||.||.||.|||||.|||||.||
Sbjct  817  ACCCACAAGCTGACCTTCAGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTGTGTATAAGTCACC  890

Query 1104  AGTGGTGTCTGGGGACACGTCTCCATGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATCGACATGGTAGACT  1177
            .|||||||||||||||||.||||||.||||.|||||||||||.||.|||||.|||||||||||||||||.||||
Sbjct  891  CGTGGTGTCTGGGGACACATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATCGACATGGTGGACT  964

Query 1178  CGCCCCAGCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTG  1236
            |.||.|||||.|||||.|||||.||.||.||||||||.|||.|||||||||||||||||
Sbjct  965  CACCACAGCTTGCCACACTAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGTTTG  1023