Nucleotide Global Alignment
Description
- Query:
- TRCN0000489514
- Subject:
- XM_006532408.3
- Aligned Length:
- 1330
- Identities:
- 945
- Gaps:
- 227
Alignment
Query 1 ATGGCTGAGCCCCGCCAGGAGTTCGAAGTGATGGAAGATCACGCTGGGACGTACGGGTTGGGGGACAGGAAAGA 74
||||||||.||.|||||||||||.||....||||||||.||.||||| |||
Sbjct 1 ATGGCTGACCCTCGCCAGGAGTTTGACACAATGGAAGACCATGCTGG------------------------AGA 50
Query 75 TCAGGGGGGCTACACCATGCACCAAGACCAAGAGGGTGACACGGACGCTGGCCTGAAAGAATCTCCCCTGCAGA 148
| |||||..|||.||||||||||||.||.||||.||||..||||.|.|||||.|||||||..|||.
Sbjct 51 T---------TACACTCTGCTCCAAGACCAAGAAGGAGACATGGACCATGGCTTAAAAGAGTCTCCCCCACAGC 115
Query 149 CCCCCACTGAGGACGGATCTGAGGAACCGGGCTCTGAAACCTCTGATGCTAAGAGCACTCCAACAGCGGA---- 218
|||||.|.||.||.|||.|.||||||||.||.||.||.|||||.||||||||||||||||||||.||.||
Sbjct 116 CCCCCGCCGATGATGGAGCGGAGGAACCAGGGTCGGAGACCTCCGATGCTAAGAGCACTCCAACTGCTGAAGAC 189
Query 219 -------------------------------------------------------------------------- 218
Sbjct 190 GTGACTGCGCCCCTAGTGGATGAGAGAGCTCCCGACAAGCAGGCCGCTGCCCAGCCCCACACGGAGATCCCAGA 263
Query 219 ---------AGCTGAAGAAGCAGGCATTGGAGACACCCCCAGCCTGGAAGACGAAGCTGCTGGTCACGTGACCC 283
|||.||||||||||||||.|||||||||||.|.||.|||.|||.||||.|||||.||.|||||.|
Sbjct 264 AGGAATTACAGCCGAAGAAGCAGGCATCGGAGACACCCCGAACCAGGAGGACCAAGCCGCTGGGCATGTGACTC 337
Query 284 AAGCTCGCATGGTCAGTAAAAGCAAAGACGGGACTGGAAGCGATGACAAAAAAGCCAAGGGGGCTGATGGTAAA 357
|||||||..|||.| |||||||||.||||.||||..||.||.||.|||||||||||.||||||||.|||
Sbjct 338 AAGCTCGTGTGGCC------AGCAAAGACAGGACAGGAAATGACGAGAAGAAAGCCAAGGGCGCTGATGGCAAA 405
Query 358 A------CGAAGATCGCCACACCGCGGGGAGCAGCCCCTCCAGGCCAGAAGGGCCAGGCCAACGCCACCAGGAT 425
| ||||||||||||||||.||||||||||||.||||.|.||||||||||..|.||||||||||||||||
Sbjct 406 ACCGGGGCGAAGATCGCCACACCTCGGGGAGCAGCCTCTCCGGCCCAGAAGGGCACGTCCAACGCCACCAGGAT 479
Query 426 TCCAGCAAAAACCCCGCCC-GCTCCAAAGACACCACCCAGCTCTGGTGAACCTCCAAAATCAGGGGATCGCAGC 498
.||.||.||.|||.||||| || ||.|||||.||.||..|.||.||||||||.||||||||.||.||.||.|||
Sbjct 480 CCCGGCCAAGACCACGCCCAGC-CCTAAGACTCCTCCAGGGTCAGGTGAACCACCAAAATCCGGAGAACGAAGC 552
Query 499 GGCTACAGCAGCCCCGGCTCCCCAGGCACTCCCGGCAGCCGCTCCCGCACCCCGTCCCTTCCAACCCCACCCAC 572
||||||||||||||||||||.||.||.||.||.|||||.|||||.||||||||.|||||.|||||.||.|||||
Sbjct 553 GGCTACAGCAGCCCCGGCTCTCCCGGAACGCCTGGCAGTCGCTCGCGCACCCCATCCCTACCAACACCGCCCAC 626
Query 573 CCGGGAGCCCAAGAAGGTGGCAGTGGTCCGTACTCCACCCAAGTCGCCGTCTTCCGCCAAGAGCCGCCTGCAGA 646
||||||||||||||||||||||||||||||.|||||.||.|||||.||.||..|....||||||||||||||||
Sbjct 627 CCGGGAGCCCAAGAAGGTGGCAGTGGTCCGCACTCCCCCTAAGTCACCATCAGCTAGTAAGAGCCGCCTGCAGA 700
Query 647 CAGCCCCCGTGCCCATGCCAGACCTGAAGAATGTCAAGTCCAAGATCGGCTCCACTGAGAACCTGAAGCACCAG 720
|.|||||.|||||||||||||||||.||||||||||.|||.|||||.|||||.|||||||||||||||||||||
Sbjct 701 CTGCCCCTGTGCCCATGCCAGACCTAAAGAATGTCAGGTCGAAGATTGGCTCTACTGAGAACCTGAAGCACCAG 774
Query 721 CCGGGAGGCGGGAAGGTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAA 794
||.|||||.||.|||
Sbjct 775 CCAGGAGGTGGCAAG----------------------------------------------------------- 789
Query 795 GGATAATATCAAACACGTCCCGGGAGGCGGCAGTGTGCAAATAGTCTACAAACCAGTTGACCTGAGCAAGGTGA 868
|||||||||||||||||.||.||.|||||||||||.||||
Sbjct 790 ----------------------------------GTGCAAATAGTCTACAAGCCGGTGGACCTGAGCAAAGTGA 829
Query 869 CCTCCAAGTGTGGCTCATTAGGCAACATCCATCATAAACCAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAG 942
||||||||||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||
Sbjct 830 CCTCCAAGTGTGGCTCGTTAGGGAACATCCATCACAAGCCAGGAGGTGGCCAGGTGGAAGTAAAATCAGAGAAG 903
Query 943 CTTGACTTCAAGGACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCACCCACGTCCCTGGCGGAGGAAA 1016
||.||||||||||||||||||||||||||||||||.|||.||||.||||||||||||||||||||.|||||.||
Sbjct 904 CTGGACTTCAAGGACAGAGTCCAGTCGAAGATTGGCTCCTTGGATAATATCACCCACGTCCCTGGAGGAGGGAA 977
Query 1017 TAAAAAGATTGAAACCCACAAGCTGACCTTCCGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCG 1090
|||.|||||||||||||||||||||||||||.|.|||||.||||||||||||||||||||.||.||.||.||.|
Sbjct 978 TAAGAAGATTGAAACCCACAAGCTGACCTTCAGGGAGAATGCCAAAGCCAAGACAGACCATGGAGCAGAAATTG 1051
Query 1091 TGTACAAGTCGCCAGTGGTGTCTGGGGACACGTCTCCATGGCATCTCAGCAATGTCTCCTCCACCGGCAGCATC 1164
||||.|||||.||.|||||||||||||||||.||||||.||||.|||||||||||.||.|||||.|||||||||
Sbjct 1052 TGTATAAGTCACCCGTGGTGTCTGGGGACACATCTCCACGGCACCTCAGCAATGTGTCTTCCACGGGCAGCATC 1125
Query 1165 GACATGGTAGACTCGCCCCAGCTCGCCACGCTAGCTGACGAGGTGTCTGCCTCCCTGGCCAAGCAGGGTTTG 1236
||||||||.|||||.||.|||||.|||||.|||||.||.||.||||||||.|||.|||||||||||||||||
Sbjct 1126 GACATGGTGGACTCACCACAGCTTGCCACACTAGCCGATGAAGTGTCTGCTTCCTTGGCCAAGCAGGGTTTG 1197