Nucleotide Global Alignment
Description
- Query:
- TRCN0000489540
- Subject:
- XR_001738697.1
- Aligned Length:
- 4033
- Identities:
- 1721
- Gaps:
- 2309
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCGCGCAGGCGCTGTGGTGGGCTCCGGTGCACTGTGGGATGGAAACCGGAGCGGCGCGTCCTGGCAGGACCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGGCGGCGGCGGCGGGGCCGGCGGCGGCCAGGGACCCGGGCTTAGGCTCGGCCAGGCCGGCTGAGGGGCGCGG 148
Query 1 --------------------------ATGAACGCGGCGGTGGTGAGGCGGACGCAGGAGGCGCTGGGGAAAGTG 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCGGCCAGCGGGCGGCGGACGCCGTCATGAACGCGGCGGTGGTGAGGCGGACGCAGGAGGCGCTGGGGAAAGTG 222
Query 49 ATTCGGAGGCCGCCGCTGACAGAGAAGCTGCTGAGCAAGCCCCCGTTCCGCTACCTGCACGACATCATCACGGA 122
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATTCGGAGGCCGCCGCTGACCGAGAAGCTGCTGAGCAAGCCCCCGTTCCGCTACCTGCACGACATCATCACGGA 296
Query 123 GGTGATTAGAATGACTGGTTTCATGAAGGGCCTCTACACAGACGCCGAGATGAAGTCTGATAATGTGAAGGATA 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGTGATTAGAATGACTGGTTTCATGAAGGGCCTCTACACAGACGCCGAGATGAAGTCTGATAATGTGAAGGATA 370
Query 197 AAGATGCAAAAATTAGCTTCCTACAAAAGGCCATAGACGTGGTTGTAATGGTGTCGGGAGAGCCACTGTTGGCC 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGATGCAAAAATTAGCTTCCTACAAAAGGCCATAGACGTGGTTGTAATGGTGTCGGGAGAGCCACTGTTGGCC 444
Query 271 AAACCAGCCCGAATCGTGGCGGGGCATGAGCCTGAAAGAACAAACGAGCTGCTCCAGATAATTGGAAAATGCTG 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAACCAGCCCGAATCGTGGCGGGGCATGAGCCTGAAAGAACAAACGAGCTGCTCCAGATAATTGGAAAATGCTG 518
Query 345 TCTCAACAAGCTCTCTAGTGACGATGCGGTGCGGAGGGTTTTAGCTGGAGAGAAGGGAGAAGTGAAAGGCCGGG 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCTCAACAAGCTCTCTAGTGACGATGCGGTGCGGAGGGTTTTAGCTGGAGAGAAGGGAGAAGTGAAAGGCCGGG 592
Query 419 CCTCACTGACCTCAAGATCTCAGGAATTGGATAATAAGAATGTGCGAGAAGAAGAGTCCAGAGTTCACAAAAAT 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTCACTGACCTCAAGATCTCAGGAATTGGATAATAAGAATGTGCGAGAAGAAGAGTCCAGAGTTCACAAAAAT 666
Query 493 ACAGAGGATAGAGGAGACGCTGAAATAAAAGAGAGAAGTACAAGCAGAGATCGAAAACAGAAGGAAGAATTGAA 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACAGAGGATAGAGGAGACGCTGAAATAAAAGAGAGAAGTACAAGCAGAGATCGAAAACAGAAGGAAGAATTGAA 740
Query 567 AGAAGACCGCAAGCCAAGAGAAAAGGACAAGGACAAGGAGAAGGCCAAGGAGAATGGCGGAAACAGACACAGAG 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGAAGACCGCAAGCCAAGAGAAAAGGACAAGGACAAGGAGAAGGCCAAGGAGAATGGCGGAAACAGACACAGAG 814
Query 641 AAGGGGAGAGAGAGAGAGCCAAAGCCCGGGCCAGGCCAGACAGCGAGCGACAGAAAGACAGAGGCAACAGGGAG 714
||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 815 AAGGGGAGAGAGAGAGAGCCAAAGCCCGGGCCAGGCCAGACAACGAGCGACAGAAAGACAGAGGCAACAGGGAG 888
Query 715 CGGGACAGAGACTCCGAGCGCAAGAAGGAGACAGAGAGAAAGAGTGAGGGGGGGAAAGAGAAGGAGAGACTGAG 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGGGACAGAGACTCCGAGCGCAAGAAGGAGACAGAGAGAAAGAGTGAGGGGGGGAAAGAGAAGGAGAGACTGAG 962
Query 789 AGACAGGGACCGAGAGCGCGACCGGGACAAAGGGAAGGACAGGGACAGACGGAGAGTGAAAAACGGGGAGCACT 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGACAGGGACCGAGAGCGCGACCGGGACAAAGGGAAGGACAGGGACAGACGGAGAGTGAAAAACGGGGAGCACT 1036
Query 863 CCTGGGACCTGGACAGGGAGAAGAACAGAGAGCATGACAAACCCGAGAAAAAGTCAGCAAGCTCAGGGGAGATG 936
|||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1037 CCTGGGACCTGGACAGGGAGAAGAACAGAGAGCATGACAAACCTGAGAAA------------------------ 1086
Query 937 TCTAAAAAGTTATCAGATGGAACTTTTAAAGACTCCAAGGCTGAAACAGAGACTGAGATTTCCACTAGAGCTTC 1010
Sbjct 1087 -------------------------------------------------------------------------- 1086
Query 1011 CAAGTCATTGACAACAAAAACATCAAAACGGCGATCCAAAAATTCAGTGGAAGGTGACTCCACCAGTGATGCAG 1084
||||||||||||||||||||||
Sbjct 1087 --------------------------------------------------AAGGTGACTCCACCAGTGATGC-- 1108
Query 1085 AAGGAGATGCTGGACCTGCTGGCCAAGATAAGTCTGAGGTGCCAGAGACTCCAGAAATTCCTAATGAGCTTTCA 1158
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 -AGGAGATGCTGGACCTGCTGGCCAAGATAAGTCTGAGGTGCCAGAGACTCCAGAAATTCCTAATGAGCTTTCA 1181
Query 1159 TCCAACATCAGAAGAATTCCTCGGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGGTCAAACGGCAAGACAGCAT 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 TCCAACATCAGAAGAATTCCTCGGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGGTCAAACGGCAAGACAGCAT 1255
Query 1233 GGAGGCGCTACAAATGGATAGGTCAGGGAGTGGTAAAACCGTTTCAAATGTGATTACAGAGTCACACAATTCTG 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 GGAGGCGCTACAAATGGATAGGTCAGGGAGTGGTAAAACCGTTTCAAATGTGATTACAGAGTCACACAATTCTG 1329
Query 1307 ACAATGAAGAGGATGATCAATTTGTGGTGGAAGCTGCCCCTCAGCTCTCTGAAATGTCAGAAATTGAAATGGTA 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330 ACAATGAAGAGGATGATCAATTTGTGGTGGAAGCTGCCCCTCAGCTCTCTGAAATGTCAGAAATTGAAATGGTA 1403
Query 1381 ACAGCAGTGGAACTAGAAGAAGAGGAGAAGCATGGTGGACTTGTGAAAAAAATTTTGGAGACGAAGAAAGATTA 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 ACAGCAGTGGAACTAGAAGAAGAGGAGAAGCATGGTGGACTTGTGAAAAAAATTTTGGAGACGAAGAAAGATTA 1477
Query 1455 TGAGAAATTGCAGCAGTCACCCAAACCTGGGGAGAAGGAGCGATCTCTCTTTGAGTCGGCATGGAAGAAGGAGA 1528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1478 TGAGAAATTGCAGCAGTCACCCAAACCTGGGGAGAAGGAGCGATCTCTCTTTGAGTCGGCATGGAAGAAGGAGA 1551
Query 1529 AGGACATCGTTTCCAAGGAGATAGAGAAGCTCCGCACGTCCATCCAGACCCTGTGCAAGAGCGCACTTCCCCTG 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 AGGACATCGTTTCCAAGGAGATAGAGAAGCTCCGCACGTCCATCCAGACCCTGTGCAAGAGCGCACTTCCCCTG 1625
Query 1603 GGGAAGATCATGGACTACATCCAGGAAGACGTGGATGCCATGCAGAATGAGCTGCAGATGTGGCACAGCGAGAA 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 GGGAAGATCATGGACTACATCCAGGAAGACGTGGATGCCATGCAGAATGAGCTGCAGATGTGGCACAGCGAGAA 1699
Query 1677 CAGGCAGCACGCCGAGGCCCTGCAGCAGGAGCAGAGGATCACAGACTGTGCCGTGGAGCCCTTAAAGGCTGAGC 1750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1700 CAGGCAGCACGCCGAGGCCCTGCAGCAGGAGCAGAGGATCACAGACTGTGCCGTGGAGCCCTTAAAGGCTGAGC 1773
Query 1751 TCGCGGAGCTGGAGCAGCTGATCAAAGACCAGCAAGACAAGATCTGTGCTGTGAAGGCCAACATCCTCAAGAAT 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774 TCGCGGAGCTGGAGCAGCTGATCAAAGACCAGCAAGACAAGATCTGTGCTGTGAAGGCCAACATCCTCAAGAAT 1847
Query 1825 GAAGAAAAAATCCAGAAAATGGTATATAGTATCAATTTGACTTCGAGAAGG----------------------- 1875
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1848 GAAGAAAAAATCCAGAAAATGGTATATAGTATCAATTTGACTTCGAGAAGGTGAACACTCAAAAGTTTCAGAGA 1921
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 1922 TGAAAAGTCACCTCAGTTTAAAAGCAAAAAGGAAGATAGAAAATCATTACTCTTTTAAGTTCCAGTTTGCTAAG 1995
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 1996 AAAATGAACAGTTTACAATGTTATTATCCAGCTAATTTTCAGAGCTTTAAAACTGTAAGCATGTTAAGTGTATT 2069
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2070 AAAAAAACCATGTTTTCTTACCTCCTTCCAGATGGAATACTGGCTAGTTATAAATAGCGCTTCCAAACACCTCT 2143
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2144 GTGAAAAGTTTTTTTGAAAGCCTGTTCTTTGTGTTTCTGCTGTAACCTGTTTAGTTCTGTACCAGAACTCTCTA 2217
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2218 GCAGGTAAGTGGTGTGGGCATACCAAGGGAACAGTAGTCCTTTATTTTGGTTTAGTGGAAAGACTTTCAGAGGT 2291
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2292 CAGTGCCGAATGAAGGATGACTGTGTACTTTTTGATAGGCACTTGATAAGTAGAATGAGGCCTGAAAATGAATA 2365
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2366 CATTATATTTTTAGTTAATTTCCAATGGAAAGGGCTAACCTCAGCCTGTCTCCATATCAGGTACCTATCAACTG 2439
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2440 GATTGTTTTCATTTTTGTTTTTTGACCTCTTTGTAATTGCATGTACTTCTCTATGTAATTTTCCTCTTGATCTC 2513
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2514 TACTATCGTTTGCTTGTGTTTCTAGTCCTTAAAGTTCATAAATTTAAAAAGGAGATTTCAGGATGGCCTTTATG 2587
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2588 GACGTTGTCTGGACATACATCCTCACTTTCTTCCGCAGTTTACCCTGGTTTTCCTCAGACAGAGGCTAGCGCAG 2661
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2662 CCCCCCGGAGTCCTTGTTCTCCTTAAGAGGGTCTCGCTCTGCAAAGCATTGGCGCCATGGCTTTTCCTTTGCAT 2735
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2736 GGGTGTGCATACCGAGAGACAGGCAGCTTAGGAAAAACAACATAAGGAAGACTTAAAAGGATGCACTGATTTAC 2809
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2810 GACGTTTTTTGATGTTAGCCATTTTTTTGGAAATTGTTTTTTAAAGCAAAAGTTTTTTAAAAACATGGTTTATA 2883
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2884 GTTTTTCACTTACATATACTATTGTAAATACTTAGCAGAGTCTTAAGTTACTGTATAAAACATTTCATTGTGTT 2957
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 2958 TGAAGACATACTTATGGGTCTTGAGGTCTGGGTCCTAATACTTTTAAATAGTGTATTTATTATGTAAACTGAGG 3031
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 3032 AGTGCCATTTAAAGTGTGAGGATTGCCTGAAAAGGTTTTGTTTCTTTCTTTTTTTTTTTTTTTTGAGATGGAGT 3105
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 3106 CTTACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAACCACCGCCTCCCGAGTTCAAG 3179
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 3180 TGATTCTCCTGCCTCAGCCTCCTGAGTAACTGGGACTACAGGCGCACGCCACCATGCCCAGCTAATTTTTGTAT 3253
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 3254 TTTCAGTAGAGATGGGGTTTCACCGTGTTGACCAGGATGGTCTCCACCTCCTGACCTCGTGATCCGCCTGCCTC 3327
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 3328 GGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCCGGCCAGGTTTTGTTTCTTTAAGGATTAGCA 3401
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 3402 CAAATGGCACCGTTGGGTTTTTCTTCATACAATTTCCAAAATAAATTCTGTACTCAGGTTGTTATATGATTTTC 3475
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 3476 TGAGCTGAATAAGTTCAGGAGCAGATTATTAAGATCTGCCATTCTGAAACGCTGGTCTTTTTCTCCTTCCTATA 3549
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 3550 GTGCACCATAAAATTCTGTTTGATCAGATTATATTACATACATTTTGGGGGAGTGGAGGGACATGAGTTAAGTA 3623
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 3624 GCCCTTCATGTATTTATAATCTCTTTTCTACTGAATCAAATGACTTAGCCATGACCCTGAATGGACCTTGTTTT 3697
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 3698 ACTTCAAGTTGAGATGTCTGCCTTTTATGAATTTGTATATGTGAATAGAGTTTGGGGGTTGCCAAAAATTGCAT 3771
Query 1876 -------------------------------------------------------------------------- 1875
Sbjct 3772 ACATTGTATGTAAGTAAAATTTTTTATGAAGTAGTCTGTCAAATTGTATCATAAAGTTTATTTTTCTTTTATAC 3845
Query 1876 ------------------------------------- 1875
Sbjct 3846 GTAAATCATTAAAAATAATCACATATTTTTTCCATAA 3882
