Nucleotide Global Alignment
Description
- Query:
- TRCN0000489543
- Subject:
- NR_036435.2
- Aligned Length:
- 3600
- Identities:
- 1343
- Gaps:
- 2241
Alignment
Query 1 ATGATTTTATTTTGA----------CTGATAGTGACCTGTTC-GTT----GCAACAAATTGATGAGCAATGCTT 59
|.|.||| |.| ||.|.||.||.| ||| ||.||||.|.||.|.|| .|||.
Sbjct 1 --------AGTCTGAGGCGAAGCTTCGG--AGCGGCCGGTACTGTTGAAAGCGACAAGTGGAGGCGC--CGCTC 62
Query 60 TTTTATAATGCCAACTTTGTACAAAAAAGCAGGC-----------ACCATGGCGGCTAGTGATACAGAGCGAGA 122
| ||| ||| ||.||||||||||||||||||||||||||
Sbjct 63 T--------------------------AGC-GGCCGGGACTCTGAACTATGGCGGCTAGTGATACAGAGCGAGA 109
Query 123 TGGACTAGCCCCAGAAAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTA 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 110 TGGACTAGCCCCAGAAAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTA 183
Query 197 GAGCTTCAAAACATCATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGA 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 184 GAGCTTCAAAACATCATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGA 257
Query 271 AGAAAACACAGGAGCCGGAGCAGAAGCAAAG------------------------------------------- 301
|||||||||||||||||||||||||||||||
Sbjct 258 AGAAAACACAGGAGCCGGAGCAGAAGCAAAGAGCGTGCTTATGCGCGAAGAGACTGAACTGAAGACGCTGCAGA 331
Query 302 ---------------------------------------------------------AGGGAAGAAGACATGAA 318
|||||||||||||||||
Sbjct 332 CTCAGATAGCAAAATAATAAGCCTACTTCATGATAAGAACCAACTTCTTCTTAAAACAGGGAAGAAGACATGAA 405
Query 319 TCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACATAATGACAAAGAACATTCTTCTGATAAAGGAAG 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 406 TCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACATAATGACAAAGAACATTCTTCTGATAAAGGAAG 479
Query 393 AGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACAAACGCAAAGAAAGAAAGTCATCAAGAGGCAGAA 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 AGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACAAACGCAAAGAAAGAAAGTCATCAAGAGGCAGAA 553
Query 467 GTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGTAGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGG 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 554 GTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGTAGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGG 627
Query 541 AGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAGGAAGAAATCGAGATCCAGAAGCAGGGAAAGAAA 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 628 AGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAGGAAGAAATCGAGATCCAGAAGCAGGGAAAGAAA 701
Query 615 ACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACAGGCATAGGACTAGAAGCAGGAGTAGGACAAGGA 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 702 ACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACAGGCATAGGACTAGAAGCAGGAGTAGGACAAGGA 775
Query 689 GTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGAAGATTTAGCAGAAGTTTAAGCCGGACTCCAAGT 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 GTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGAAGATTTAGCAGAAGTTTAAGCCGGACTCCAAGT 849
Query 763 CCACGTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACAGGAAGCTTTAGCTAGAAGGTTGGAAAGGGCAAA 836
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 850 CCACCTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACAGGAAGCTTTAGCTAGAAGGTTGGAAAGGGCAAA 923
Query 837 GAAATTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCTGCAGCTA 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 GAAATTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCTGCAGCTA 997
Query 911 CTGGAGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCA 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 998 CTGGAGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCA 1071
Query 985 GCTCAGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGC 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 GCTCAGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGC 1145
Query 1059 CGCTGTTAATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGG 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1146 CGCTGTTAATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGG 1219
Query 1133 ACAAATCCCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAA 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1220 ACAAATCCCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAA 1293
Query 1207 TTGATGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCA 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1294 TTGATGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCA 1367
Query 1281 GCAGGAAGAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAA 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1368 GCAGGAAGAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAA 1441
Query 1355 TGGGTTTGGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTT------------------------------ 1398
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1442 TGGGTTTGGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTTTGAAAATGATCACACTTGTAAAGTTTGGGA 1515
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1516 CTTATAGACTTCTTGTTCTGATGTCACGTCCTTGTTCACCAAACAGCTAGCACTCTAGCTTGCATGGGTGTTGC 1589
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1590 ATTGACTTTAATTTATTGAAAAATACAAATTTTTGTAAATATCAGATCAGTGATACTGGTGTTAGTGTTGTAAT 1663
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1664 CAGGTTAAACCCACTTCCATTAAACTTGACAGGACTATAGAAGGATAATATTTTTTAGTTCATGAATTCTACTT 1737
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1738 TTCAAATATATAAAAGCTGCAGGTGGGGATAAAATCTCATACATGGATTTTTTCGTGTCCGCTGTCTTGTGTAC 1811
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1812 TTTTGTACTTAACCTTGTACAGTTATTTTCATCTCTTGAAACATGAAAGAAATGTTATGTAGATGTTCTTTAGA 1885
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1886 AGATCTGGCCATTTGGTACATAATCCAGCACAGATAAGCTGGGTGGTAATGATAATAAAAATGGTTTTCTCAAA 1959
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1960 ACTGGTGTTAATTTAAGTTACCTGGGATGTTTCTTTGAATTTGTTTTATAGTTTCTGTAGCATTTGGCAATTGC 2033
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2034 TGTTAGAAAACACTAGCTAGAAATCCCCTCCCCACCACCCTTTTTAAGGCCAGTTAACTATACTACAGTCAATA 2107
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2108 CCGTGGTGAGCAAAAATGTAAAAGGTGGAAGGAGAAAACTTACTAAAATAGTATGTTTTCCTATTATAAGGGAC 2181
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2182 AGACTTGGTATTCAGTATTTGTCAAATATTACATGTGTTATTCAGGAGATAGATTAATGCATTAAAGGGATGTA 2255
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2256 AGCACTTTTATTTTAATAAAGTGCCTTATAACAAGTTCTTTGCATGCTTTTTGCTCATTATCCCTTTGAAGTCT 2329
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2330 TCTCCAGCATAGACTATAAAATATTAAAATATTAGAAATTTTTTTTGTTTGTTTTTTTGAGACAGGATCTTGCT 2403
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2404 CTGTTGCCTAAACTGGGTGCAGTGGCACAATCTCGGCTCACTGCCAGAGCCTCTGCCCCCCAGGTTCAAGCAAT 2477
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2478 TCTCCCACCTCCACCTCCCATGTAACTGGGATTACAGGCGTACCACCGCACCCAGCTAATTTTTGTATTTTTAG 2551
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2552 TAGAGGTGGGGTTTTACCATGTTGGCCAGGCTGGTCCTGAACTCCTGACCTCAGGTGATCCACCCTCCTCAGCC 2625
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2626 TCCCAAAGTGCCGGGATTATAGGCGTGAGCCACTGCAGCCAGCCTAGAAAATGTTTTGTTACTAGATTGAACAT 2699
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2700 AAATCTGGAGCCAAGGGGTGGGGGGGGCCTGCAAAACTTGAAGTTAATTTACTTCAGTTACAGCAAAGTAATAA 2773
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2774 GGTTTGGCTTTCCTTTGAAAAATCCTTTGGAAAACATCACAGAATGAGAGCACATTACAATCAGGGAAGACTAC 2847
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2848 AGGAATAAGATTGACAGCCTTATTTTAAAAGCTGGAATTAAGTCTTGCCAACTTGCTCATTAGGTATTTTTTTT 2921
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2922 ATACATGAAAATGAAGTAATGGGGTGTTTTCTTTTTTTTTGCTTTCTGTCCTAGGCTGGAGTGCAGTGCATTGC 2995
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2996 AGCAGGCTCCCCCAGGCTCAAGCAGTCCTCCCACCTCAGCCTCTTGAGTACCTGGGACCACAGGTGCTCACCAA 3069
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3070 CACACCTAGCTTGTTTTTAATTTTTTATAAAGACAAGGTCTTGTTACGTTGCCCAGGTTGGTCTTGAATTCCTG 3143
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3144 GCCTCAAGCAATCCTCCCACCTCAGGGCTCCCAAAGTGATGGGGTTACAGGTGTGATCCACTTCACCTAGCCAG 3217
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3218 ATTGTAAGATTTTTAATGTACTTTAATAAACCTTTCATTTTCCCAGAGCACAGAAATTCTATGGCAAAATGGCT 3291
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3292 TTTCACCGTGTTTCAGTGACAAATCTAAGCCTTCTAAGGAAATGACACTATGGATCCTTCATTTCGTGATCATC 3365
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3366 AACATTTTTCAATTAAGCTCTGCCTTTTTAAATCAATCTTATTAAAAATGTTCATGACCTTCTAAGGCAGTGTG 3439
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3440 GACGCAAAAGCTTCCTGTGTGTCTACAGTTATTTTAGGAGCTGACCATACATGATGAGTGATACAGCCTGTACT 3513
Query 1399 ------------------------------------------------ 1398
Sbjct 3514 TTGCTCATCTAGAGCAGCACTGTCCAATAAAATATGTGTGTATATGTA 3561
