Nucleotide Global Alignment
Description
- Query:
- TRCN0000489543
- Subject:
- NR_036436.2
- Aligned Length:
- 3522
- Identities:
- 1343
- Gaps:
- 2163
Alignment
Query 1 ATGATTTTATTTTGA----------CTGATAGTGACCTGTTC-GTT----GCAACAAATTGATGAGCAATGCTT 59
|.|.||| |.| ||.|.||.||.| ||| ||.||||.|.||.|.|| .|||.
Sbjct 1 --------AGTCTGAGGCGAAGCTTCGG--AGCGGCCGGTACTGTTGAAAGCGACAAGTGGAGGCGC--CGCTC 62
Query 60 TTTTATAATGCCAACTTTGTACAAAAAAGCAGGC-----------ACCATGGCGGCTAGTGATACAGAGCGAGA 122
| ||| ||| ||.||||||||||||||||||||||||||
Sbjct 63 T--------------------------AGC-GGCCGGGACTCTGAACTATGGCGGCTAGTGATACAGAGCGAGA 109
Query 123 TGGACTAGCCCCAGAAAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTA 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 110 TGGACTAGCCCCAGAAAAGACATCACCAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTA 183
Query 197 GAGCTTCAAAACATCATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGA 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 184 GAGCTTCAAAACATCATTATTCAAGATCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGA 257
Query 271 AGAAAACACAGGAGCCGGAGCAGAAGCAAAG----------------------AGGGAAGAAGACATGAATCCA 322
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 258 AGAAAACACAGGAGCCGGAGCAGAAGCAAAGAGAACCAACTTCTTCTTAAAACAGGGAAGAAGACATGAATCCA 331
Query 323 AAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACATAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAG 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 332 AAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACATAATGACAAAGAACATTCTTCTGATAAAGGAAGAGAG 405
Query 397 CGACTAAATTCATCTGAAAATGGTGAGGACAGGCACAAACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCA 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 406 CGACTAAATTCATCTGAAAATGGTGAGGACAGGCACAAACGCAAAGAAAGAAAGTCATCAAGAGGCAGAAGTCA 479
Query 471 CTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGTAGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTA 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 CTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGTAGAAGCAGGGAGCGGAAGAAGTCTCGATCCAGGAGTA 553
Query 545 GGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAGGAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGG 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 554 GGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAGGAAGAAATCGAGATCCAGAAGCAGGGAAAGAAAACGG 627
Query 619 CGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACAGGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAG 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 628 CGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACAGGCATAGGACTAGAAGCAGGAGTAGGACAAGGAGTAG 701
Query 693 GAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGAAGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCAC 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 702 GAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGAAGATTTAGCAGAAGTTTAAGCCGGACTCCAAGTCCAC 775
Query 767 GTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACAGGAAGCTTTAGCTAGAAGGTTGGAAAGGGCAAAGAAA 840
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 CTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACAGGAAGCTTTAGCTAGAAGGTTGGAAAGGGCAAAGAAA 849
Query 841 TTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCTGCAGCTACTGG 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 850 TTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAAGAAATAGCTGCAGCTGCAGCTACTGG 923
Query 915 AGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTC 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 AGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACAAGTAACACCTCAGATAGCCATGGCAGCTC 997
Query 989 AGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCT 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 998 AGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAGCTGTTCCTAGCTACTATAACCCAGCCGCT 1071
Query 1063 GTTAATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAA 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 GTTAATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATGCTTTGGCAGGGCAAGAAAGAAGGGGACAA 1145
Query 1137 ATCCCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGA 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1146 ATCCCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAAGGACCAAAATGTCAAATTTAGGAAATTGA 1219
Query 1211 TGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAG 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1220 TGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATGAAGAAAGTTACAAGACTCTGAAGCAGCAG 1293
Query 1285 GAAGAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGG 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1294 GAAGAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGATCACAAACCCACACACAAAGAGGAATGGG 1367
Query 1359 TTTGGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTT---------------------------------- 1398
||||||||||||||||||||||||||||||||||||||||
Sbjct 1368 TTTGGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTTTGAAAATGATCACACTTGTAAAGTTTGGGACTTA 1441
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1442 TAGACTTCTTGTTCTGATGTCACGTCCTTGTTCACCAAACAGCTAGCACTCTAGCTTGCATGGGTGTTGCATTG 1515
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1516 ACTTTAATTTATTGAAAAATACAAATTTTTGTAAATATCAGATCAGTGATACTGGTGTTAGTGTTGTAATCAGG 1589
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1590 TTAAACCCACTTCCATTAAACTTGACAGGACTATAGAAGGATAATATTTTTTAGTTCATGAATTCTACTTTTCA 1663
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1664 AATATATAAAAGCTGCAGGTGGGGATAAAATCTCATACATGGATTTTTTCGTGTCCGCTGTCTTGTGTACTTTT 1737
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1738 GTACTTAACCTTGTACAGTTATTTTCATCTCTTGAAACATGAAAGAAATGTTATGTAGATGTTCTTTAGAAGAT 1811
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1812 CTGGCCATTTGGTACATAATCCAGCACAGATAAGCTGGGTGGTAATGATAATAAAAATGGTTTTCTCAAAACTG 1885
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1886 GTGTTAATTTAAGTTACCTGGGATGTTTCTTTGAATTTGTTTTATAGTTTCTGTAGCATTTGGCAATTGCTGTT 1959
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1960 AGAAAACACTAGCTAGAAATCCCCTCCCCACCACCCTTTTTAAGGCCAGTTAACTATACTACAGTCAATACCGT 2033
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2034 GGTGAGCAAAAATGTAAAAGGTGGAAGGAGAAAACTTACTAAAATAGTATGTTTTCCTATTATAAGGGACAGAC 2107
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2108 TTGGTATTCAGTATTTGTCAAATATTACATGTGTTATTCAGGAGATAGATTAATGCATTAAAGGGATGTAAGCA 2181
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2182 CTTTTATTTTAATAAAGTGCCTTATAACAAGTTCTTTGCATGCTTTTTGCTCATTATCCCTTTGAAGTCTTCTC 2255
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2256 CAGCATAGACTATAAAATATTAAAATATTAGAAATTTTTTTTGTTTGTTTTTTTGAGACAGGATCTTGCTCTGT 2329
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2330 TGCCTAAACTGGGTGCAGTGGCACAATCTCGGCTCACTGCCAGAGCCTCTGCCCCCCAGGTTCAAGCAATTCTC 2403
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2404 CCACCTCCACCTCCCATGTAACTGGGATTACAGGCGTACCACCGCACCCAGCTAATTTTTGTATTTTTAGTAGA 2477
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2478 GGTGGGGTTTTACCATGTTGGCCAGGCTGGTCCTGAACTCCTGACCTCAGGTGATCCACCCTCCTCAGCCTCCC 2551
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2552 AAAGTGCCGGGATTATAGGCGTGAGCCACTGCAGCCAGCCTAGAAAATGTTTTGTTACTAGATTGAACATAAAT 2625
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2626 CTGGAGCCAAGGGGTGGGGGGGGCCTGCAAAACTTGAAGTTAATTTACTTCAGTTACAGCAAAGTAATAAGGTT 2699
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2700 TGGCTTTCCTTTGAAAAATCCTTTGGAAAACATCACAGAATGAGAGCACATTACAATCAGGGAAGACTACAGGA 2773
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2774 ATAAGATTGACAGCCTTATTTTAAAAGCTGGAATTAAGTCTTGCCAACTTGCTCATTAGGTATTTTTTTTATAC 2847
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2848 ATGAAAATGAAGTAATGGGGTGTTTTCTTTTTTTTTGCTTTCTGTCCTAGGCTGGAGTGCAGTGCATTGCAGCA 2921
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2922 GGCTCCCCCAGGCTCAAGCAGTCCTCCCACCTCAGCCTCTTGAGTACCTGGGACCACAGGTGCTCACCAACACA 2995
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2996 CCTAGCTTGTTTTTAATTTTTTATAAAGACAAGGTCTTGTTACGTTGCCCAGGTTGGTCTTGAATTCCTGGCCT 3069
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3070 CAAGCAATCCTCCCACCTCAGGGCTCCCAAAGTGATGGGGTTACAGGTGTGATCCACTTCACCTAGCCAGATTG 3143
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3144 TAAGATTTTTAATGTACTTTAATAAACCTTTCATTTTCCCAGAGCACAGAAATTCTATGGCAAAATGGCTTTTC 3217
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3218 ACCGTGTTTCAGTGACAAATCTAAGCCTTCTAAGGAAATGACACTATGGATCCTTCATTTCGTGATCATCAACA 3291
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3292 TTTTTCAATTAAGCTCTGCCTTTTTAAATCAATCTTATTAAAAATGTTCATGACCTTCTAAGGCAGTGTGGACG 3365
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3366 CAAAAGCTTCCTGTGTGTCTACAGTTATTTTAGGAGCTGACCATACATGATGAGTGATACAGCCTGTACTTTGC 3439
Query 1399 -------------------------------------------- 1398
Sbjct 3440 TCATCTAGAGCAGCACTGTCCAATAAAATATGTGTGTATATGTA 3483
