Nucleotide Global Alignment

Description

Query:
TRCN0000489543
Subject:
XM_017019832.1
Aligned Length:
1401
Identities:
606
Gaps:
795

Alignment

Query    1  ATGATTTTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TTTGTACAAAAAAGCAGGCACCATGGCGGCTAGTGATACAGAGCGAGATGGACTAGCCCCAGAAAAGACATCAC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAGATAGAGATAAGAAAAAAGAGCAGTCAGAAGTATCTGTTTCTCCTAGAGCTTCAAAACATCATTATTCAAGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TCACGATCAAGGTCAAGAGAAAGAAAACGAAAGTCAGATAATGAAGGAAGAAAACACAGGAGCCGGAGCAGAAG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAAAGAGGGAAGAAGACATGAATCCAAAGATAAATCCTCTAAGAAACATAAGTCTGAGGAACATAATGACAAAG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AACATTCTTCTGATAAAGGAAGAGAGCGACTAAATTCATCTGAAAATGGTGAGGACAGGCACAAACGCAAAGAA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AGAAAGTCATCAAGAGGCAGAAGTCACTCAAGATCTAGGTCTCGTGAAAGACGCCATCGTAGTAGAAGCAGGGA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  GCGGAAGAAGTCTCGATCCAGGAGTAGGGAGCGGAAGAAATCGAGATCCAGAAGCAGAGAGAGGAAGAAATCGA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  GATCCAGAAGCAGGGAAAGAAAACGGCGGATCAGGTCTCGTTCCCGCTCAAGATCAAGACACAGGCATAGGACT  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  AGAAGCAGGAGTAGGACAAGGAGTAGGAGTCGAGATAGAAAGAAGAGAATTGAAAAGCCGAGAAGATTTAGCAG  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  AAGTTTAAGCCGGACTCCAAGTCCACGTCCCTTCAGAGGCAGAAACACAGCAATGGATGCACAGGAAGCTTTAG  814
                                                                ||||||||||||||||||||||
Sbjct    1  ----------------------------------------------------ATGGATGCACAGGAAGCTTTAG  22

Query  815  CTAGAAGGTTGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   23  CTAGAAGGTTGGAAAGGGCAAAGAAATTACAAGAACAGCGAGAAAAGGAAATGGTTGAAAAACAAAAACAACAA  96

Query  889  GAAATAGCT---GCAGCTGCAGCTACTGGAGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACA  959
            |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   97  GAAATAGCTGCAGCAGCTGCAGCTACTGGAGGTTCTGTTCTCAATGTTGCTGCCCTGTTGGCATCAGGAACACA  170

Query  960  AGTAACACCTCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAG  1033
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  171  AGTAACACCTCAGATAGCCATGGCAGCTCAGATGGCAGCCCTGCAAGCTAAAGCTTTGGCAGAGACAGGAATAG  244

Query 1034  CTGTTCCTAGCTACTATAACCCAGCCGCTGTTAATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATG  1107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  245  CTGTTCCTAGCTACTATAACCCAGCCGCTGTTAATCCAATGAAATTTGCTGAACAAGAGAAAAAAAGGAAAATG  318

Query 1108  CTTTGGCAGGGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAA  1181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  319  CTTTGGCAGGGCAAGAAAGAAGGGGACAAATCCCAATCTGCTGAAATATGGGAAAAATTGAATTTTGGAAACAA  392

Query 1182  GGACCAAAATGTCAAATTTAGGAAATTGATGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATG  1255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  393  GGACCAAAATGTCAAATTTAGGAAATTGATGGGTATTAAGAGTGAAGATGAAGCTGGATGTAGCTCAGTTGATG  466

Query 1256  AAGAAAGTTACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGA  1329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  467  AAGAAAGTTACAAGACTCTGAAGCAGCAGGAAGAAGTATTTCGAAATTTAGATGCTCAGTATGAAATGGCAAGA  540

Query 1330  TCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTT  1398
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  541  TCACAAACCCACACACAAAGAGGAATGGGTTTGGGTTTCACATCTTCAATGCGAGGAATGGATGCAGTT  609

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